Finding intermodel H-bonds Finding intramodel H-bonds Constraints relaxed by 0.4 angstroms and 20 degrees Models used: #0 4dnu_A.cif H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): ARG 6.A NH2 SER 23.A O no hydrogen 3.022 N/A LYS 7.A N SER 23.A OG no hydrogen 2.949 N/A VAL 8.A N ASN 332.A OD1 no hydrogen 2.939 N/A LEU 9.A N LEU 21.A O no hydrogen 2.834 N/A ILE 10.A N LEU 21.A O no hydrogen 3.295 N/A SER 12.A N VAL 19.A O no hydrogen 2.857 N/A ALA 13.A N SER 319.A OG no hydrogen 2.835 N/A GLY 14.A N HIS 17.A O no hydrogen 2.841 N/A ALA 15.A N ALA 67.A O no hydrogen 2.954 N/A HIS 17.A NE2 THR 70.A OG1 no hydrogen 2.970 N/A SER 18.A N TRP 30.A O no hydrogen 2.800 N/A SER 18.A OG HIS 324.A NE2 no hydrogen 2.950 N/A SER 18.A OG GLN 344.A O no hydrogen 2.889 N/A VAL 19.A N SER 12.A O no hydrogen 2.948 N/A ALA 20.A N CYS 28.A O.A no hydrogen 2.886 N/A ALA 20.A N CYS 28.A O.B no hydrogen 2.887 N/A LEU 21.A N ILE 10.A O no hydrogen 2.892 N/A LEU 22.A N ILE 26.A O no hydrogen 2.829 N/A SER 23.A N LYS 7.A O no hydrogen 2.906 N/A ILE 26.A N LEU 22.A O no hydrogen 3.111 N/A CYS 28.A N.A ALA 20.A O no hydrogen 2.973 N/A CYS 28.A N.B ALA 20.A O no hydrogen 2.949 N/A CYS 28.A SG.A ALA 20.A O no hydrogen 4.012 N/A SER 29.A N THR 50.A O no hydrogen 2.921 N/A SER 29.A OG LEU 38.A O no hydrogen 2.785 N/A SER 29.A OG HIS 40.A NE2 no hydrogen 2.850 N/A TRP 30.A N SER 18.A O no hydrogen 2.852 N/A GLY 31.A N ARG 46.A O no hydrogen 2.728 N/A ARG 32.A N SER 16.A O no hydrogen 2.853 N/A ARG 32.A NH1 ASP 35.A OD2 no hydrogen 2.955 N/A ARG 32.A NH2 GLU 34.A OE2 no hydrogen 2.833 N/A ARG 32.A NH2 ASP 35.A OD2 no hydrogen 3.225 N/A GLY 33.A N ASP 45.A OD1 no hydrogen 2.996 N/A ASP 35.A N GLN 37.A OE1 no hydrogen 2.836 N/A GLY 36.A N GLY 33.A O no hydrogen 3.045 N/A GLN 37.A N GLN 37.A OE1 no hydrogen 2.870 N/A GLY 39.A N GLY 36.A O no hydrogen 3.065 N/A GLY 41.A N PHE 99.A O no hydrogen 2.827 N/A GLU 44.A N ASP 42.A OD2 no hydrogen 2.956 N/A ARG 46.A N GLY 31.A O no hydrogen 2.984 N/A ARG 46.A NH2 ASP 42.A OD1 no hydrogen 2.779 N/A THR 50.A N SER 29.A O no hydrogen 3.035 N/A THR 50.A OG1 SER 48.A O no hydrogen 2.803 N/A GLN 51.A NE2 ASP 56.A OD1 no hydrogen 2.807 N/A GLN 51.A NE2 ASP 56.A OD2 no hydrogen 3.357 N/A LEU 52.A N VAL 27.A O no hydrogen 2.726 N/A LEU 55.A N LEU 52.A O no hydrogen 3.059 N/A ASP 56.A N SER 53.A O no hydrogen 2.955 N/A HIS 58.A N LEU 55.A O no hydrogen 3.103 N/A HIS 58.A ND1 ASP 56.A O no hydrogen 2.973 N/A VAL 61.A N TYR 73.A O no hydrogen 2.927 N/A THR 64.A N VAL 71.A O no hydrogen 2.773 N/A THR 64.A OG1 ILE 115.A O no hydrogen 3.327 N/A CYS 65.A N SER 12.A OG no hydrogen 2.838 N/A CYS 65.A SG SER 12.A O no hydrogen 3.530 N/A CYS 65.A SG HIS 17.A NE2 no hydrogen 3.495 N/A GLY 66.A N HIS 69.A O no hydrogen 2.825 N/A ALA 67.A N GLY 118.A O no hydrogen 3.264 N/A THR 70.A N TRP 82.A O no hydrogen 2.937 N/A THR 70.A OG1 HIS 17.A NE2 no hydrogen 2.970 N/A THR 70.A OG1 GLN 37.A O no hydrogen 2.847 N/A VAL 71.A N THR 64.A O no hydrogen 2.890 N/A ALA 72.A N TYR 80.A O no hydrogen 2.936 N/A TYR 73.A N SER 62.A O no hydrogen 3.113 N/A SER 74.A N GLU 78.A O no hydrogen 2.843 N/A SER 74.A OG HIS 58.A O no hydrogen 3.219 N/A SER 74.A OG GLN 59.A O no hydrogen 3.119 N/A SER 76.A OG.B GLN 59.A OE1 no hydrogen 2.864 N/A GLY 77.A N SER 74.A OG no hydrogen 3.024 N/A TYR 80.A N ALA 72.A O no hydrogen 2.647 N/A SER 81.A N LEU 102.A O no hydrogen 3.003 N/A SER 81.A OG LEU 90.A O no hydrogen 2.741 N/A TRP 82.A N THR 70.A O no hydrogen 3.042 N/A GLY 83.A N LEU 98.A O no hydrogen 2.796 N/A TRP 84.A N ASP 68.A O no hydrogen 2.972 N/A GLY 85.A N ASP 97.A OD1 no hydrogen 2.904 N/A GLY 88.A N GLY 85.A O no hydrogen 3.153 N/A ARG 89.A NE ASP 86.A O no hydrogen 2.949 N/A ARG 89.A NH2 ASP 86.A O no hydrogen 3.273 N/A GLY 91.A N GLY 88.A O no hydrogen 2.935 N/A GLY 93.A N LEU 150.A O no hydrogen 2.871 N/A SER 96.A N ASN 94.A OD1 no hydrogen 2.859 N/A SER 96.A OG ASN 94.A OD1 no hydrogen 3.359 N/A LEU 98.A N GLY 83.A O no hydrogen 2.901 N/A LEU 102.A N SER 81.A O no hydrogen 3.168 N/A ILE 104.A N VAL 79.A O no hydrogen 2.665 N/A LEU 107.A N ILE 104.A O no hydrogen 2.866 N/A HIS 108.A N LYS 105.A O no hydrogen 3.082 N/A HIS 108.A ND1 GLU 78.A OE2 no hydrogen 2.946 N/A ILE 110.A N LEU 107.A O no hydrogen 3.252 N/A ARG 111.A NH2 GLU 127.A OE2 no hydrogen 3.015 N/A LYS 113.A N VAL 125.A O no hydrogen 2.725 N/A LYS 113.A NZ LYS 164.A O no hydrogen 2.935 N/A GLN 114.A N VAL 125.A O no hydrogen 3.260 N/A GLN 114.A NE2 VAL 165.A O no hydrogen 2.930 N/A ALA 116.A N LEU 123.A O no hydrogen 2.951 N/A CYS 117.A SG THR 64.A O no hydrogen 3.834 N/A CYS 117.A SG HIS 69.A NE2 no hydrogen 3.678 N/A GLY 118.A N HIS 121.A O no hydrogen 2.836 N/A ASP 119.A N GLY 168.A O no hydrogen 3.168 N/A HIS 121.A NE2 THR 172.A OG1 no hydrogen 2.835 N/A CYS 122.A N TRP 133.A O no hydrogen 2.936 N/A CYS 122.A SG HIS 69.A NE2 no hydrogen 3.100 N/A CYS 122.A SG ARG 89.A O no hydrogen 3.377 N/A LEU 123.A N ALA 116.A O no hydrogen 2.924 N/A ALA 124.A N GLN 131.A O no hydrogen 2.798 N/A VAL 125.A N GLN 114.A O no hydrogen 2.831 N/A THR 126.A N GLU 129.A O no hydrogen 2.936 N/A GLY 128.A N THR 126.A O no hydrogen 2.882 N/A GLU 129.A N THR 126.A OG1 no hydrogen 3.121 N/A GLN 131.A N ALA 124.A O no hydrogen 2.918 N/A SER 132.A N GLN 153.A O no hydrogen 2.964 N/A SER 132.A OG LEU 141.A O no hydrogen 2.767 N/A TRP 133.A N CYS 122.A O no hydrogen 2.971 N/A TRP 133.A NE1 ARG 89.A O no hydrogen 2.928 N/A GLY 134.A N SER 149.A O no hydrogen 2.822 N/A ARG 135.A N SER 120.A O no hydrogen 2.811 N/A ASN 136.A N ASP 148.A OD1 no hydrogen 2.838 N/A ASN 136.A ND2 GLU 147.A O no hydrogen 3.049 N/A GLN 137.A NE2 ASP 148.A OD1 no hydrogen 2.993 N/A ASN 138.A N GLN 140.A OE1 no hydrogen 2.878 N/A ASN 138.A ND2 ASP 199.A OD2 no hydrogen 2.909 N/A GLY 139.A N ASN 136.A O no hydrogen 3.030 N/A GLN 140.A N GLN 140.A OE1 no hydrogen 2.791 N/A LEU 141.A N ASN 136.A OD1 no hydrogen 3.039 N/A GLY 142.A N GLY 139.A O no hydrogen 2.901 N/A GLY 144.A N LEU 201.A O no hydrogen 2.915 N/A GLU 147.A N ASP 145.A OD2 no hydrogen 3.487 N/A SER 149.A N GLY 134.A O no hydrogen 3.007 N/A SER 149.A OG VAL 151.A O no hydrogen 2.661 N/A SER 149.A OG GLN 153.A OE1 no hydrogen 2.832 N/A GLN 153.A N SER 132.A O no hydrogen 2.957 N/A LYS 154.A NZ GLU 129.A OE1 no hydrogen 3.262 N/A LYS 154.A NZ GLU 159.A OE2 no hydrogen 3.517 N/A ILE 155.A N VAL 130.A O no hydrogen 2.866 N/A PHE 158.A N ILE 155.A O no hydrogen 3.192 N/A GLU 159.A N GLN 156.A O no hydrogen 3.145 N/A ILE 161.A N PHE 158.A O no hydrogen 2.833 N/A ILE 163.A N GLY 128.A O no hydrogen 3.032 N/A LYS 164.A N VAL 175.A O no hydrogen 2.885 N/A LYS 164.A NZ SER 214.A O no hydrogen 2.853 N/A VAL 165.A N GLN 114.A OE1 no hydrogen 2.871 N/A ALA 166.A N ALA 173.A O no hydrogen 2.838 N/A GLY 168.A N HIS 171.A O no hydrogen 2.801 N/A ALA 169.A N TRP 219.A O no hydrogen 3.090 N/A HIS 171.A NE2 THR 222.A OG1 no hydrogen 3.013 N/A THR 172.A N TRP 184.A O no hydrogen 2.884 N/A THR 172.A OG1 HIS 121.A NE2 no hydrogen 2.835 N/A THR 172.A OG1 GLN 140.A O no hydrogen 2.803 N/A ALA 173.A N ALA 166.A O no hydrogen 2.853 N/A ALA 174.A N TYR 182.A O no hydrogen 3.178 N/A THR 176.A N ASP 180.A O no hydrogen 2.950 N/A THR 176.A OG1 ASP 178.A OD2 no hydrogen 2.498 N/A GLU 177.A N ARG 162.A O no hydrogen 2.972 N/A GLY 179.A N THR 176.A O no hydrogen 2.986 N/A ASP 180.A N THR 176.A OG1 no hydrogen 2.881 N/A TYR 182.A N ALA 174.A O no hydrogen 2.850 N/A GLY 183.A N GLU 204.A O no hydrogen 3.050 N/A TRP 184.A N THR 172.A O no hydrogen 2.972 N/A GLY 185.A N ARG 200.A O no hydrogen 2.847 N/A TRP 186.A N GLU 170.A O no hydrogen 2.935 N/A GLY 187.A N ASP 199.A OD1 no hydrogen 2.888 N/A ARG 188.A NE ASP 199.A OD1 no hydrogen 2.872 N/A ARG 188.A NH2 ASP 199.A OD2 no hydrogen 3.039 N/A TYR 189.A N ASN 191.A OD1 no hydrogen 3.320 N/A GLY 190.A N GLY 187.A O no hydrogen 3.078 N/A ASN 191.A ND2 TRP 186.A O no hydrogen 2.801 N/A GLY 193.A N GLY 190.A O no hydrogen 3.130 N/A GLY 195.A N LEU 251.A O no hydrogen 2.870 N/A THR 198.A N ASP 196.A OD1 no hydrogen 3.035 N/A ARG 200.A N GLY 185.A O no hydrogen 3.144 N/A ARG 200.A NH1 ASP 196.A OD1 no hydrogen 3.125 N/A ARG 200.A NH2 ASP 196.A OD2 no hydrogen 2.925 N/A GLU 204.A N GLY 183.A O no hydrogen 3.063 N/A VAL 206.A N LEU 181.A O no hydrogen 2.752 N/A THR 209.A OG1 GLU 212.A O no hydrogen 2.953 N/A GLU 212.A N THR 209.A O no hydrogen 3.190 N/A SER 214.A N VAL 225.A O no hydrogen 2.815 N/A SER 214.A OG VAL 225.A O no hydrogen 3.374 N/A ALA 216.A N ILE 223.A O no hydrogen 2.864 N/A CYS 217.A SG HIS 171.A NE2 no hydrogen 3.693 N/A GLY 218.A N HIS 221.A O no hydrogen 2.851 N/A TRP 219.A N GLY 270.A O no hydrogen 3.243 N/A ARG 220.A NH1 GLU 170.A OE1 no hydrogen 2.674 N/A ARG 220.A NH2 GLU 170.A OE1 no hydrogen 2.986 N/A HIS 221.A NE2 THR 274.A OG1 no hydrogen 2.830 N/A THR 222.A N TYR 234.A O no hydrogen 2.876 N/A THR 222.A OG1 HIS 171.A NE2 no hydrogen 3.013 N/A THR 222.A OG1 ASN 191.A O no hydrogen 2.758 N/A ILE 223.A N ALA 216.A O no hydrogen 2.833 N/A SER 224.A N TYR 232.A O no hydrogen 2.854 N/A SER 226.A N ALA 230.A O no hydrogen 2.977 N/A SER 226.A OG GLU 212.A OE1 no hydrogen 2.899 N/A SER 226.A OG SER 228.A OG no hydrogen 3.046 N/A TYR 227.A N LYS 213.A O no hydrogen 2.996 N/A SER 228.A N SER 226.A OG no hydrogen 3.308 N/A SER 228.A OG GLU 212.A OE1 no hydrogen 3.481 N/A SER 228.A OG GLU 212.A OE2 no hydrogen 2.930 N/A SER 228.A OG SER 226.A OG no hydrogen 3.046 N/A GLY 229.A N SER 226.A O no hydrogen 2.878 N/A ALA 230.A N SER 226.A OG no hydrogen 3.232 N/A TYR 232.A N SER 224.A O no hydrogen 2.827 N/A TYR 232.A OH GLU 212.A OE1 no hydrogen 2.706 N/A THR 233.A N HIS 254.A O no hydrogen 3.031 N/A THR 233.A OG1 LEU 242.A O no hydrogen 2.722 N/A THR 233.A OG1 HIS 244.A NE2 no hydrogen 2.726 N/A TYR 234.A N THR 222.A O no hydrogen 2.961 N/A GLY 235.A N HIS 250.A O no hydrogen 2.857 N/A TRP 236.A N ARG 220.A O no hydrogen 3.051 N/A SER 237.A N ASP 249.A OD1 no hydrogen 2.952 N/A TYR 239.A N GLN 241.A OE1 no hydrogen 2.913 N/A GLY 240.A N SER 237.A O no hydrogen 2.924 N/A GLN 241.A N GLN 241.A OE1 no hydrogen 2.781 N/A LEU 242.A N SER 237.A OG no hydrogen 3.008 N/A GLY 243.A N GLY 240.A O no hydrogen 2.909 N/A GLY 245.A N CYS 302.A O no hydrogen 2.761 N/A GLU 248.A N ASP 246.A OD1 no hydrogen 3.185 N/A HIS 250.A N GLY 235.A O no hydrogen 3.115 N/A HIS 254.A N THR 233.A O no hydrogen 3.093 N/A LYS 255.A NZ SER 260.A OG no hydrogen 3.300 N/A LEU 256.A N LEU 231.A O no hydrogen 2.741 N/A LEU 259.A N LEU 256.A O no hydrogen 3.196 N/A SER 260.A N GLU 257.A O no hydrogen 2.927 N/A SER 262.A N LEU 259.A O no hydrogen 2.875 N/A ILE 264.A N GLY 229.A O no hydrogen 3.013 N/A SER 265.A N LEU 276.A O no hydrogen 2.739 N/A GLN 266.A N LEU 276.A O no hydrogen 3.217 N/A GLY 270.A N HIS 273.A O no hydrogen 2.751 N/A ALA 271.A N GLY 321.A O no hydrogen 3.270 N/A HIS 273.A NE2 THR 325.A OG1 no hydrogen 2.977 N/A THR 274.A N TRP 285.A O no hydrogen 2.922 N/A THR 274.A OG1 HIS 221.A NE2 no hydrogen 2.830 N/A THR 274.A OG1 GLN 241.A O no hydrogen 2.726 N/A LEU 276.A N GLN 266.A O no hydrogen 2.916 N/A THR 277.A N LYS 281.A O no hydrogen 2.887 N/A THR 277.A OG1 ASP 279.A OD2 no hydrogen 2.575 N/A THR 277.A OG1 LYS 281.A O no hydrogen 3.495 N/A SER 278.A N PHE 263.A O no hydrogen 2.809 N/A GLY 280.A N THR 277.A O no hydrogen 3.026 N/A LYS 281.A N THR 277.A OG1 no hydrogen 3.013 N/A TYR 283.A N ALA 275.A O no hydrogen 2.825 N/A GLY 284.A N VAL 305.A O no hydrogen 2.903 N/A TRP 285.A N THR 274.A O no hydrogen 3.123 N/A TRP 285.A NE1 GLN 241.A O no hydrogen 2.888 N/A GLY 286.A N GLN 301.A O no hydrogen 2.669 N/A TRP 287.A N ARG 272.A O no hydrogen 2.837 N/A ASN 288.A N ASP 300.A OD1 no hydrogen 2.886 N/A ASN 288.A ND2 ASN 297.A O no hydrogen 3.037 N/A ASN 288.A ND2 LEU 299.A O no hydrogen 2.996 N/A PHE 290.A N GLN 292.A OE1 no hydrogen 3.024 N/A GLY 291.A N ASN 288.A O no hydrogen 2.944 N/A GLN 292.A N GLN 292.A OE1 no hydrogen 2.900 N/A VAL 293.A N ASN 288.A OD1 no hydrogen 2.966 N/A GLY 294.A N GLY 291.A O no hydrogen 2.968 N/A GLY 296.A N ASN 354.A O no hydrogen 2.854 N/A ASN 298.A ND2 LYS 289.A O no hydrogen 2.954 N/A LEU 299.A N ASN 297.A OD1 no hydrogen 2.960 N/A GLN 301.A N GLY 286.A O no hydrogen 3.057 N/A GLN 301.A NE2 ASN 297.A OD1 no hydrogen 3.544 N/A GLN 301.A NE2 LEU 299.A O no hydrogen 2.959 N/A VAL 305.A N GLY 284.A O no hydrogen 2.961 N/A VAL 307.A N LEU 282.A O no hydrogen 2.742 N/A ASP 312.A N PHE 309.A O no hydrogen 2.892 N/A GLN 313.A N PRO 310.A O no hydrogen 3.218 N/A GLN 313.A NE2 PRO 310.A O no hydrogen 2.899 N/A LYS 314.A N GLU 330.A OE1 no hydrogen 2.884 N/A VAL 315.A N GLY 280.A O no hydrogen 2.884 N/A VAL 316.A N VAL 328.A O no hydrogen 2.749 N/A GLN 317.A N VAL 328.A O no hydrogen 3.228 N/A GLN 317.A NE2 VAL 8.A O no hydrogen 3.348 N/A GLN 317.A NE2 LEU 9.A O no hydrogen 3.168 N/A SER 319.A N LEU 326.A O no hydrogen 2.915 N/A CYS 320.A N SER 268.A OG no hydrogen 2.983 N/A CYS 320.A SG SER 268.A O no hydrogen 3.862 N/A CYS 320.A SG SER 268.A OG no hydrogen 3.639 N/A CYS 320.A SG HIS 273.A NE2 no hydrogen 3.761 N/A GLY 321.A N HIS 324.A O no hydrogen 2.794 N/A TRP 322.A N ALA 15.A O no hydrogen 3.084 N/A HIS 324.A NE2 SER 18.A OG no hydrogen 2.950 N/A THR 325.A N TRP 337.A O no hydrogen 2.923 N/A THR 325.A OG1 HIS 273.A NE2 no hydrogen 2.977 N/A THR 325.A OG1 GLN 292.A O no hydrogen 2.783 N/A LEU 326.A N SER 319.A O no hydrogen 2.819 N/A ALA 327.A N PHE 335.A O no hydrogen 2.933 N/A VAL 328.A N GLN 317.A O no hydrogen 2.917 N/A THR 329.A N ASN 333.A O no hydrogen 2.914 N/A THR 329.A OG1 GLN 313.A OE1 no hydrogen 2.710 N/A GLU 330.A N LYS 314.A O no hydrogen 2.895 N/A ARG 331.A N THR 329.A OG1 no hydrogen 3.341 N/A ARG 331.A NH1 ASP 311.A OD2 no hydrogen 3.436 N/A ARG 331.A NH1 ASP 365.A OD2 no hydrogen 3.474 N/A ARG 331.A NH2 ASP 311.A OD2 no hydrogen 3.240 N/A ASN 332.A N THR 329.A O no hydrogen 2.985 N/A ASN 332.A ND2 ARG 6.A O no hydrogen 3.116 N/A ASN 333.A ND2 GLN 313.A OE1 no hydrogen 3.023 N/A ASN 333.A ND2 ASP 365.A OD2 no hydrogen 2.779 N/A VAL 334.A N SER 363.A OG no hydrogen 2.784 N/A PHE 335.A N ALA 327.A O no hydrogen 2.778 N/A ALA 336.A N LYS 357.A O no hydrogen 2.907 N/A TRP 337.A N THR 325.A O no hydrogen 3.039 N/A GLY 338.A N ARG 353.A O no hydrogen 2.721 N/A ARG 339.A N ARG 323.A O no hydrogen 2.810 N/A ARG 339.A NH1 ASP 352.A OD1 no hydrogen 2.866 N/A GLY 340.A N ASP 352.A OD2 no hydrogen 2.869 N/A ASN 342.A N GLN 344.A OE1 no hydrogen 2.912 N/A ASN 342.A ND2 ASP 45.A OD2 no hydrogen 2.843 N/A GLY 343.A N GLY 340.A O no hydrogen 3.004 N/A GLN 344.A N GLN 344.A OE1 no hydrogen 2.862 N/A GLY 346.A N GLY 343.A O no hydrogen 3.029 N/A GLY 348.A N PRO 47.A O no hydrogen 2.959 N/A SER 350.A OG VAL 351.A O no hydrogen 2.686 N/A ARG 353.A N GLY 338.A O no hydrogen 2.986 N/A ARG 353.A NE SER 350.A OG no hydrogen 2.968 N/A ARG 353.A NH2 SER 350.A OG no hydrogen 3.079 N/A ASN 354.A ND2 ASN 298.A OD1 no hydrogen 3.056 N/A LYS 357.A N ALA 336.A O no hydrogen 2.963 N/A ILE 359.A N VAL 334.A O no hydrogen 2.797 N/A LEU 362.A N ILE 359.A O no hydrogen 3.157 N/A SER 363.A N GLU 360.A O no hydrogen 3.343 N/A SER 363.A OG VAL 334.A O no hydrogen 3.325 N/A SER 363.A OG ILE 359.A O no hydrogen 2.804 N/A VAL 364.A N ASN 332.A O no hydrogen 3.273 N/A ASP 365.A N ASN 333.A OD1 no hydrogen 2.889 N/A