Finding intermodel H-bonds
Finding intramodel H-bonds
Constraints relaxed by 0.4 angstroms and 20 degrees
Models used:
	#0 4rna_A.cif

H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist):
ILE 3.A N        LEU 19.A O     no hydrogen  2.813  N/A
GLU 4.A N        ASN 49.A OD1   no hydrogen  2.896  N/A
VAL 5.A N        VAL 17.A O     no hydrogen  2.926  N/A
LEU 6.A N        HIS 51.A O     no hydrogen  2.806  N/A
VAL 7.A N        ARG 15.A O     no hydrogen  2.715  N/A
THR 8.A N        LEU 53.A O     no hydrogen  2.810  N/A
THR 8.A OG1      ASN 13.A O     no hydrogen  2.621  N/A
ASP 10.A N       THR 8.A OG1    no hydrogen  3.068  N/A
GLY 11.A N       THR 8.A OG1    no hydrogen  2.720  N/A
VAL 12.A N       ASP 10.A OD1   no hydrogen  2.968  N/A
ASN 13.A N       ASP 10.A OD1   no hydrogen  2.733  N/A
ASN 13.A ND2     ASP 10.A OD2   no hydrogen  2.586  N/A
ARG 15.A N       VAL 7.A O      no hydrogen  2.991  N/A
ARG 15.A NE      GLU 63.A OE2   no hydrogen  2.746  N/A
ARG 15.A NH2     GLU 63.A OE1   no hydrogen  3.190  N/A
ARG 15.A NH2     GLU 63.A OE2   no hydrogen  3.365  N/A
VAL 17.A N       VAL 5.A O      no hydrogen  2.919  N/A
LEU 19.A N       ILE 3.A O      no hydrogen  2.775  N/A
ASN 20.A N       GLN 28.A OE1   no hydrogen  2.910  N/A
ASN 21.A N       LEU 1.A O      no hydrogen  3.181  N/A
LYS 22.A N       ASN 20.A OD1   no hydrogen  2.460  N/A
ASN 23.A N       ASN 20.A OD1   no hydrogen  2.891  N/A
ASN 23.A ND2     ASN 20.A OD1   no hydrogen  3.524  N/A
THR 24.A OG1     SER 27.A OG    no hydrogen  2.524  N/A
TYR 25.A N       THR 42.A O     no hydrogen  3.069  N/A
TYR 25.A OH      GLN 48.A OE1   no hydrogen  2.795  N/A
ARG 26.A N       SER 40.A O     no hydrogen  2.770  N/A
ARG 26.A NE      ASP 41.A OD1   no hydrogen  2.851  N/A
ARG 26.A NH2     ASP 41.A OD1   no hydrogen  3.244  N/A
ARG 26.A NH2     ASP 41.A OD2   no hydrogen  2.756  N/A
SER 27.A N       THR 24.A OG1   no hydrogen  2.938  N/A
SER 27.A OG      THR 24.A OG1   no hydrogen  2.524  N/A
GLN 28.A N       THR 24.A O     no hydrogen  2.942  N/A
GLN 28.A NE2     ASN 20.A O     no hydrogen  2.841  N/A
GLN 28.A NE2     ASN 23.A O     no hydrogen  3.085  N/A
LEU 29.A N       TYR 25.A O     no hydrogen  2.612  N/A
GLY 30.A N       TYR 25.A O     no hydrogen  3.069  N/A
CYS 31.A N       ASP 57.A OD1   no hydrogen  2.892  N/A
CYS 31.A SG      ASP 38.A OD2   no hydrogen  3.578  N/A
CYS 31.A SG      SER 40.A OG    no hydrogen  3.534  N/A
VAL 32.A N       SER 40.A OG    no hydrogen  3.055  N/A
PHE 33.A N       TYR 54.A O     no hydrogen  2.844  N/A
PHE 34.A N       ALA 37.A O     no hydrogen  2.830  N/A
ALA 37.A N       PHE 34.A O     no hydrogen  3.015  N/A
ILE 39.A N       VAL 32.A O     no hydrogen  2.951  N/A
SER 40.A N       ASP 38.A OD1   no hydrogen  2.948  N/A
SER 40.A OG      ASP 38.A OD1   no hydrogen  2.512  N/A
THR 42.A N       ILE 39.A O     no hydrogen  2.984  N/A
THR 42.A OG1     ILE 39.A O     no hydrogen  2.745  N/A
ASP 45.A N       GLN 48.A OE1   no hydrogen  2.858  N/A
GLU 46.A N       GLU 46.A OE2   no hydrogen  3.077  N/A
LYS 47.A N       ASP 45.A OD2   no hydrogen  2.703  N/A
GLN 48.A N       ASP 45.A O     no hydrogen  3.010  N/A
ASN 49.A N       GLU 46.A O     no hydrogen  3.066  N/A
GLY 50.A N       GLU 4.A O      no hydrogen  2.632  N/A
HIS 51.A N       GLN 48.A O     no hydrogen  3.067  N/A
LEU 53.A N       LEU 6.A O      no hydrogen  2.509  N/A
TYR 54.A N       PHE 33.A O     no hydrogen  2.919  N/A
LEU 55.A N       THR 8.A O      no hydrogen  2.933  N/A
ALA 56.A N       CYS 31.A O     no hydrogen  2.718  N/A
THR 60.A N       GLU 63.A OE1   no hydrogen  2.905  N/A
THR 60.A OG1     GLU 63.A OE1   no hydrogen  3.105  N/A
GLU 63.A N       THR 60.A OG1   no hydrogen  3.063  N/A
THR 64.A N       THR 60.A O     no hydrogen  2.925  N/A
THR 64.A OG1     THR 60.A O     no hydrogen  3.122  N/A
LYS 65.A N       ALA 61.A O     no hydrogen  3.171  N/A
ALA 66.A N       ASP 62.A O     no hydrogen  2.915  N/A
LEU 67.A N       GLU 63.A O     no hydrogen  2.729  N/A
LYS 68.A N       THR 64.A O     no hydrogen  2.983  N/A
GLU 69.A N       LYS 65.A O     no hydrogen  2.965  N/A
LEU 70.A N       ALA 66.A O     no hydrogen  3.040  N/A
LEU 70.A N       LEU 67.A O     no hydrogen  3.154  N/A
TYR 71.A N       LEU 67.A O     no hydrogen  2.814  N/A
GLY 72.A N       LYS 68.A O     no hydrogen  2.803  N/A
THR 77.A N       ASP 75.A OD2   no hydrogen  2.759  N/A
THR 77.A OG1     ASP 75.A OD1   no hydrogen  3.461  N/A
THR 77.A OG1     ASP 75.A OD2   no hydrogen  2.368  N/A
PHE 78.A N       ASP 75.A O     no hydrogen  2.934  N/A
ARG 81.A N       THR 77.A O     no hydrogen  2.981  N/A
ARG 81.A NE      THR 77.A OG1   no hydrogen  2.826  N/A
ARG 81.A NH1     ALA 151.A O    no hydrogen  2.973  N/A
ARG 81.A NH2     ASP 75.A OD1   no hydrogen  2.785  N/A
PHE 82.A N       PHE 78.A O     no hydrogen  2.851  N/A
TYR 83.A N       LEU 79.A O     no hydrogen  2.845  N/A
TYR 83.A OH      LEU 55.A O     no hydrogen  3.239  N/A
SER 84.A N       HIS 80.A O     no hydrogen  3.033  N/A
SER 84.A OG      HIS 80.A O     no hydrogen  2.758  N/A
LEU 85.A N       ARG 81.A O     no hydrogen  2.832  N/A
LYS 86.A N       PHE 82.A O     no hydrogen  2.826  N/A
LYS 86.A NZ      ASP 144.A OD1  no hydrogen  3.068  N/A
ALA 87.A N       TYR 83.A O     no hydrogen  3.256  N/A
ALA 88.A N       SER 84.A O     no hydrogen  3.026  N/A
VAL 89.A N       LEU 85.A O     no hydrogen  2.632  N/A
HIS 90.A N       LYS 86.A O     no hydrogen  3.166  N/A
GLY 91.A N       ALA 88.A O     no hydrogen  3.250  N/A
TRP 92.A N       VAL 89.A O     no hydrogen  2.840  N/A
TRP 92.A NE1     ASP 106.A OD2  no hydrogen  2.756  N/A
VAL 95.A N       SER 101.A O    no hydrogen  2.927  N/A
ARG 100.A NH2.B  HIS 137.A NE2  no hydrogen  3.337  N/A
SER 101.A N      VAL 95.A O     no hydrogen  2.879  N/A
SER 101.A OG     ASN 111.A OD1  no hydrogen  2.842  N/A
LEU 102.A N      ASN 111.A OD1  no hydrogen  2.878  N/A
LYS 103.A N      LYS 93.A O     no hydrogen  2.781  N/A
LEU 104.A N      SER 291.A O    no hydrogen  3.286  N/A
SER 105.A N      ASN 108.A OD1  no hydrogen  2.996  N/A
SER 105.A OG     ASP 106.A OD2  no hydrogen  2.692  N/A
ASN 107.A ND2    GLY 158.A O    no hydrogen  2.950  N/A
ASN 108.A N      SER 105.A O    no hydrogen  3.022  N/A
ASN 108.A ND2    LYS 103.A O    no hydrogen  3.048  N/A
LEU 110.A N      ASN 108.A O    no hydrogen  2.682  N/A
ASN 111.A N      ASN 108.A O    no hydrogen  3.302  N/A
ASN 111.A ND2    PHE 289.A O    no hydrogen  3.397  N/A
VAL 113.A N      TYR 109.A O    no hydrogen  2.985  N/A
ILE 114.A N      LEU 110.A O    no hydrogen  2.875  N/A
MET 115.A N      ASN 111.A O    no hydrogen  2.868  N/A
THR 116.A N      ALA 112.A O    no hydrogen  3.175  N/A
THR 116.A OG1    ALA 112.A O    no hydrogen  2.858  N/A
LEU 117.A N      VAL 113.A O    no hydrogen  2.937  N/A
ASP 118.A N      ILE 114.A O    no hydrogen  2.847  N/A
LEU 119.A N      THR 116.A O    no hydrogen  3.010  N/A
LEU 120.A N      LEU 117.A O    no hydrogen  3.088  N/A
LYS 124.A N      GLU 175.A O    no hydrogen  2.949  N/A
LYS 124.A NZ     GLU 175.A OE1  no hydrogen  2.582  N/A
PHE 125.A N      GLN 131.A OE1  no hydrogen  2.671  N/A
VAL 126.A N      LYS 173.A O    no hydrogen  2.942  N/A
ALA 129.A N      LEU 70.A O     no hydrogen  2.906  N/A
GLN 131.A N      ILE 127.A O    no hydrogen  3.019  N/A
HIS 132.A N      PRO 128.A O    no hydrogen  2.874  N/A
ALA 133.A N      ALA 129.A O    no hydrogen  2.863  N/A
PHE 134.A N      LEU 130.A O    no hydrogen  2.865  N/A
MET 135.A N      GLN 131.A O    no hydrogen  2.932  N/A
LYS 136.A N      HIS 132.A O    no hydrogen  3.128  N/A
LYS 136.A NZ     ASP 144.A OD2  no hydrogen  2.847  N/A
HIS 137.A N      ALA 133.A O    no hydrogen  2.830  N/A
HIS 137.A ND1    SER 142.A OG   no hydrogen  2.534  N/A
HIS 137.A NE2    ASP 118.A OD1  no hydrogen  2.701  N/A
HIS 137.A NE2    ASP 118.A OD2  no hydrogen  3.186  N/A
LYS 138.A N      PHE 134.A O    no hydrogen  2.824  N/A
GLY 139.A N      MET 135.A O    no hydrogen  2.918  N/A
GLY 140.A N      HIS 137.A O    no hydrogen  2.885  N/A
ASP 141.A N      LYS 136.A O    no hydrogen  2.746  N/A
SER 142.A OG     HIS 137.A ND1  no hydrogen  2.534  N/A
ILE 146.A N      SER 142.A O    no hydrogen  3.067  N/A
ALA 147.A N      THR 143.A O    no hydrogen  2.962  N/A
LEU 148.A N      ASP 144.A O    no hydrogen  2.810  N/A
ILE 149.A N      PHE 145.A O    no hydrogen  2.966  N/A
MET 150.A N      ILE 146.A O    no hydrogen  3.011  N/A
ALA 151.A N      ALA 147.A O    no hydrogen  2.879  N/A
TYR 152.A N      LEU 148.A O    no hydrogen  2.767  N/A
TYR 152.A OH     TYR 71.A O     no hydrogen  2.686  N/A
GLY 153.A N      ILE 149.A O    no hydrogen  2.801  N/A
ASN 154.A N      ALA 151.A O    no hydrogen  3.262  N/A
CYS 155.A N      MET 150.A O    no hydrogen  2.839  N/A
CYS 155.A SG     MET 150.A O    no hydrogen  3.853  N/A
CYS 155.A SG     ASP 161.A OD2  no hydrogen  3.686  N/A
ALA 159.A N      THR 156.A O    no hydrogen  3.059  N/A
ASP 162.A N      ASP 161.A OD1  no hydrogen  2.742  N/A
ALA 163.A N      TYR 276.A OH   no hydrogen  3.178  N/A
SER 164.A OG     ASP 306.A OD1  no hydrogen  2.798  N/A
SER 164.A OG     ASP 306.A OD2  no hydrogen  3.325  N/A
ARG 165.A N      ASP 162.A OD1  no hydrogen  2.934  N/A
ARG 165.A NE     ASP 161.A OD1  no hydrogen  3.269  N/A
ARG 165.A NH1    GLY 153.A O    no hydrogen  3.080  N/A
ARG 165.A NH2    GLY 153.A O    no hydrogen  2.658  N/A
ARG 165.A NH2    ASP 161.A OD1  no hydrogen  3.096  N/A
ARG 165.A NH2    ASP 161.A OD2  no hydrogen  3.457  N/A
LEU 166.A N      ASP 162.A O    no hydrogen  2.962  N/A
LEU 167.A N      ALA 163.A O    no hydrogen  2.906  N/A
HIS 168.A N      SER 164.A O    no hydrogen  3.065  N/A
HIS 168.A NE2    SER 244.A OG   no hydrogen  3.092  N/A
THR 169.A N      ARG 165.A O    no hydrogen  2.975  N/A
THR 169.A OG1    ARG 165.A O    no hydrogen  3.355  N/A
THR 169.A OG1    LEU 166.A O    no hydrogen  2.739  N/A
VAL 170.A N      LEU 166.A O    no hydrogen  2.759  N/A
LEU 171.A N      LEU 167.A O    no hydrogen  2.946  N/A
ALA 172.A N      HIS 168.A O    no hydrogen  2.869  N/A
LYS 173.A N      VAL 170.A O    no hydrogen  2.963  N/A
ALA 174.A N      LEU 171.A O    no hydrogen  2.958  N/A
GLU 175.A N      LYS 124.A O    no hydrogen  2.654  N/A
CYS 177.A N      ASP 122.A O    no hydrogen  2.552  N/A
CYS 178.A SG     SER 179.A O    no hydrogen  3.798  N/A
ARG 181.A N      THR 237.A O    no hydrogen  2.616  N/A
MET 182.A N      LEU 198.A O    no hydrogen  2.756  N/A
VAL 183.A N      GLU 235.A O    no hydrogen  2.752  N/A
TRP 184.A N      VAL 196.A O    no hydrogen  2.914  N/A
ARG 185.A N      GLN 232.A O    no hydrogen  2.855  N/A
ARG 185.A NE     ASP 195.A OD1  no hydrogen  2.955  N/A
ARG 185.A NH2    ASP 195.A OD2  no hydrogen  3.176  N/A
GLU 186.A N      LYS 194.A O    no hydrogen  2.838  N/A
TRP 187.A N      HIS 230.A O    no hydrogen  2.972  N/A
CYS 188.A N      GLY 192.A O    no hydrogen  2.961  N/A
CYS 188.A SG     GLU 228.A O    no hydrogen  3.598  N/A
GLY 192.A N      CYS 188.A O    no hydrogen  2.890  N/A
LYS 194.A N      GLU 186.A O    no hydrogen  2.845  N/A
LYS 194.A NZ     ASP 195.A O    no hydrogen  3.013  N/A
VAL 196.A N      TRP 184.A O    no hydrogen  2.921  N/A
LEU 198.A N      MET 182.A O    no hydrogen  2.819  N/A
GLY 200.A N      ALA 180.A O    no hydrogen  3.265  N/A
ALA 203.A N      GLY 200.A O    no hydrogen  3.036  N/A
CYS 204.A N      LEU 201.A O    no hydrogen  2.864  N/A
CYS 204.A SG     GLY 200.A O    no hydrogen  3.538  N/A
CYS 205.A SG     LEU 201.A O    no hydrogen  3.766  N/A
TYR 206.A N      LEU 242.A O    no hydrogen  2.897  N/A
GLY 208.A N      SER 244.A O    no hydrogen  2.854  N/A
GLN 210.A NE2    THR 246.A O    no hydrogen  3.394  N/A
GLN 210.A NE2    VAL 304.A O    no hydrogen  2.835  N/A
GLN 210.A NE2    THR 305.A O    no hydrogen  2.881  N/A
GLU 213.A N      GLU 213.A OE2  no hydrogen  2.971  N/A
ASP 214.A N      THR 211.A OG1  no hydrogen  2.944  N/A
LEU 215.A N      THR 211.A O    no hydrogen  3.002  N/A
ARG 216.A N      VAL 212.A O    no hydrogen  2.957  N/A
ARG 216.A N      GLU 213.A O    no hydrogen  3.316  N/A
ARG 216.A NH2    GLN 312.A OE1  no hydrogen  3.220  N/A
ALA 217.A N      ASP 214.A O    no hydrogen  3.287  N/A
MET 219.A N      ARG 231.A O    no hydrogen  2.895  N/A
THR 220.A OG1    HIS 230.A ND1  no hydrogen  2.498  N/A
TYR 221.A N      ARG 229.A O    no hydrogen  2.869  N/A
CYS 223.A N      GLY 227.A O    no hydrogen  2.877  N/A
GLY 226.A N      CYS 223.A O    no hydrogen  3.020  N/A
ARG 229.A N      TYR 221.A O    no hydrogen  2.762  N/A
ARG 229.A NH1    GLN 224.A OE1  no hydrogen  2.907  N/A
HIS 230.A N      TRP 187.A O    no hydrogen  2.752  N/A
HIS 230.A ND1    THR 220.A OG1  no hydrogen  2.498  N/A
ARG 231.A N      MET 219.A O    no hydrogen  2.618  N/A
ARG 231.A NH1.A  GLU 186.A OE2  no hydrogen  2.750  N/A
ARG 231.A NH1.B  TYR 206.A OH   no hydrogen  3.359  N/A
GLN 232.A N      ARG 185.A O    no hydrogen  2.764  N/A
VAL 234.A N      VAL 183.A O    no hydrogen  2.839  N/A
GLU 235.A N      VAL 183.A O    no hydrogen  3.313  N/A
HIS 236.A N      TYR 314.A O    no hydrogen  2.845  N/A
HIS 236.A NE2    ALA 203.A O    no hydrogen  2.884  N/A
THR 237.A N      ARG 181.A O    no hydrogen  2.746  N/A
THR 238.A N      GLN 312.A O    no hydrogen  3.088  N/A
THR 238.A OG1    TRP 240.A O    no hydrogen  2.740  N/A
TRP 240.A NE1    LYS 121.A O    no hydrogen  2.797  N/A
LEU 241.A N      PHE 309.A O    no hydrogen  2.928  N/A
LEU 242.A N      CYS 204.A O    no hydrogen  2.686  N/A
LEU 243.A N      VAL 307.A O    no hydrogen  2.862  N/A
SER 244.A N      TYR 206.A O    no hydrogen  3.032  N/A
SER 244.A OG     HIS 168.A NE2  no hydrogen  3.092  N/A
SER 244.A OG     ASP 306.A OD1  no hydrogen  2.645  N/A
GLY 245.A N      THR 305.A O    no hydrogen  3.208  N/A
ASN 248.A N      VAL 304.A O    no hydrogen  2.938  N/A
ASN 248.A ND2    GLN 210.A OE1  no hydrogen  2.913  N/A
LYS 250.A N      CYS 302.A O    no hydrogen  2.812  N/A
VAL 252.A N      TRP 300.A O    no hydrogen  2.611  N/A
THR 253.A OG1    SER 255.A OG   no hydrogen  2.810  N/A
THR 253.A OG1    ASP 299.A OD2  no hydrogen  2.731  N/A
THR 254.A N      SER 298.A O    no hydrogen  2.892  N/A
THR 254.A OG1    GLY 284.A O    no hydrogen  2.804  N/A
THR 254.A OG1    SER 298.A O    no hydrogen  3.373  N/A
SER 255.A N      THR 253.A OG1  no hydrogen  2.969  N/A
SER 255.A OG     THR 253.A OG1  no hydrogen  2.810  N/A
ALA 257.A N      THR 254.A O    no hydrogen  2.888  N/A
VAL 261.A N      LEU 308.A O    no hydrogen  2.917  N/A
PHE 263.A N      ALA 279.A O    no hydrogen  2.973  N/A
ASN 264.A N      ASP 306.A O    no hydrogen  2.866  N/A
ASN 264.A ND2    THR 116.A OG1  no hydrogen  3.073  N/A
ASN 264.A ND2    ASP 306.A OD2  no hydrogen  3.016  N/A
VAL 265.A N      VAL 277.A O    no hydrogen  2.810  N/A
PHE 266.A N      LYS 303.A O    no hydrogen  2.949  N/A
GLN 267.A N      HIS 275.A O    no hydrogen  2.740  N/A
THR 271.A N      GLY 268.A O    no hydrogen  3.227  N/A
THR 271.A OG1    GLY 268.A O    no hydrogen  3.335  N/A
HIS 275.A N      GLN 267.A O    no hydrogen  2.822  N/A
HIS 275.A NE2    ASP 290.A OD1  no hydrogen  2.552  N/A
HIS 275.A NE2    ASP 290.A OD2  no hydrogen  3.155  N/A
VAL 277.A N      VAL 265.A O    no hydrogen  2.913  N/A
HIS 278.A N      PHE 289.A O    no hydrogen  3.157  N/A
HIS 278.A ND1    ASN 264.A OD1  no hydrogen  2.788  N/A
ALA 279.A N      PHE 263.A O    no hydrogen  2.846  N/A
ARG 280.A N      LEU 287.A O    no hydrogen  2.743  N/A
ARG 280.A NE     HIS 278.A NE2  no hydrogen  2.909  N/A
ARG 280.A NH2    MET 115.A O    no hydrogen  2.791  N/A
LEU 281.A N      VAL 261.A O    no hydrogen  3.053  N/A
LYS 282.A N      LEU 285.A O    no hydrogen  3.056  N/A
LEU 285.A N      LYS 282.A O    no hydrogen  3.131  N/A
ILE 286.A N      THR 297.A O    no hydrogen  2.731  N/A
LEU 287.A N      ARG 280.A O    no hydrogen  2.656  N/A
LYS 288.A N      SER 295.A O    no hydrogen  2.713  N/A
PHE 289.A N      HIS 278.A O    no hydrogen  2.673  N/A
ASP 290.A N      THR 293.A O    no hydrogen  2.926  N/A
GLY 292.A N      SER 101.A OG   no hydrogen  3.201  N/A
SER 295.A N      LYS 288.A O    no hydrogen  2.998  N/A
THR 297.A N      ILE 286.A O    no hydrogen  3.151  N/A
THR 297.A OG1    ASP 299.A O    no hydrogen  2.910  N/A
SER 298.A OG     ASP 299.A OD1  no hydrogen  2.976  N/A
ASP 299.A N      THR 297.A OG1  no hydrogen  3.353  N/A
TRP 300.A N      VAL 252.A O    no hydrogen  2.715  N/A
CYS 302.A N      LYS 250.A O    no hydrogen  2.993  N/A
CYS 302.A SG     TRP 300.A O    no hydrogen  3.862  N/A
VAL 304.A N      ASN 248.A O    no hydrogen  2.967  N/A
THR 305.A N      ASN 264.A O    no hydrogen  2.894  N/A
VAL 307.A N      LEU 243.A O    no hydrogen  2.660  N/A
LEU 308.A N      ALA 262.A O    no hydrogen  2.777  N/A
PHE 309.A N      LEU 241.A O    no hydrogen  2.723  N/A
GLN 312.A N      THR 238.A OG1  no hydrogen  3.202  N/A
GLN 312.A NE2    PRO 310.A O    no hydrogen  3.008  N/A
TYR 314.A N      HIS 236.A O    no hydrogen  2.756  N/A
SER 316.A N      VAL 234.A O    no hydrogen  2.780  N/A