Finding intermodel H-bonds Finding intramodel H-bonds Constraints relaxed by 0.4 angstroms and 20 degrees Models used: #0 5ly2_A.cif H-bonds (donor, acceptor, hydrogen, D..A dist, D-H..A dist): THR 1.A OG1 THR 1.A O no hydrogen 2.530 N/A ALA 6.A N ASN 3.A O no hydrogen 2.995 N/A ILE 8.A N ASP 252.A OD2 no hydrogen 3.391 N/A PHE 11.A N LYS 40.A O no hydrogen 2.917 N/A GLU 17.A N THR 14.A OG1 no hydrogen 3.360 N/A PHE 18.A N THR 14.A O no hydrogen 3.036 N/A PHE 18.A N MET 15.A O no hydrogen 3.195 N/A ARG 19.A N.A GLU 16.A O no hydrogen 3.433 N/A ARG 19.A N.B GLU 16.A O no hydrogen 3.471 N/A TYR 24.A N ASN 20.A O no hydrogen 3.156 N/A ILE 25.A N PHE 21.A O no hydrogen 3.000 N/A ALA 26.A N SER 22.A O no hydrogen 2.936 N/A TYR 27.A N ARG 23.A O no hydrogen 2.896 N/A ILE 28.A N TYR 24.A O no hydrogen 2.947 N/A GLU 29.A N ILE 25.A O no hydrogen 3.010 N/A SER 30.A N ALA 26.A O no hydrogen 2.854 N/A SER 30.A OG TYR 27.A O no hydrogen 2.496 N/A GLN 31.A N TYR 27.A O no hydrogen 3.030 N/A GLN 31.A N ILE 28.A O no hydrogen 3.112 N/A GLN 31.A NE2 SER 30.A OG no hydrogen 3.178 N/A GLY 32.A N GLU 29.A O no hydrogen 3.016 N/A ALA 33.A N ILE 28.A O no hydrogen 3.122 N/A HIS 34.A NE2 THR 338.A O no hydrogen 2.770 N/A ARG 35.A N GLY 32.A O no hydrogen 3.287 N/A ALA 36.A N ALA 33.A O no hydrogen 3.355 N/A GLY 37.A N HIS 34.A O no hydrogen 3.030 N/A ALA 39.A N ILE 263.A O no hydrogen 2.880 N/A LYS 40.A N MET 9.A O no hydrogen 3.134 N/A LYS 40.A NZ THR 255.A O no hydrogen 2.990 N/A LYS 40.A NZ GLU 260.A OE1 no hydrogen 3.083 N/A VAL 41.A N PHE 261.A O no hydrogen 2.908 N/A VAL 42.A N PHE 11.A O no hydrogen 2.802 N/A GLU 46.A N GLU 46.A OE1 no hydrogen 2.556 N/A TRP 47.A N PRO 44.A O no hydrogen 3.008 N/A ARG 50.A NH1 LEU 134.A O no hydrogen 2.847 N/A ARG 50.A NH2 ASP 55.A OD1 no hydrogen 3.231 N/A ALA 51.A N GLU 136.A OE2 no hydrogen 3.025 N/A TYR 53.A OH HIS 195.A ND1 no hydrogen 2.815 N/A ASP 54.A N SER 52.A OG no hydrogen 3.188 N/A LEU 59.A N ILE 56.A O no hydrogen 2.884 N/A ILE 61.A N MET 86.A O no hydrogen 2.843 N/A ILE 65.A N TYR 126.A O no hydrogen 3.077 N/A GLN 66.A N ILE 81.A O no hydrogen 2.880 N/A GLN 67.A N PRO 124.A O no hydrogen 3.017 N/A GLN 67.A NE2 SER 178.A O no hydrogen 2.966 N/A LEU 68.A N TYR 79.A O no hydrogen 2.916 N/A THR 70.A N THR 77.A O no hydrogen 2.965 N/A GLN 72.A N LEU 75.A O no hydrogen 2.943 N/A LEU 75.A N GLN 72.A O no hydrogen 2.950 N/A PHE 76.A N LEU 238.A O no hydrogen 2.966 N/A THR 77.A N THR 70.A O no hydrogen 2.878 N/A GLN 78.A N MET 236.A O no hydrogen 2.717 N/A GLN 78.A NE2 SER 178.A O no hydrogen 3.441 N/A TYR 79.A N LEU 68.A O no hydrogen 2.778 N/A ILE 81.A N GLN 66.A O no hydrogen 2.968 N/A LYS 83.A N PRO 64.A O no hydrogen 2.789 N/A MET 86.A N ILE 61.A O no hydrogen 3.189 N/A THR 87.A N GLU 90.A OE2 no hydrogen 3.251 N/A VAL 88.A N LEU 59.A O no hydrogen 2.970 N/A ARG 89.A N ASP 57.A O no hydrogen 3.026 N/A GLU 90.A N THR 87.A OG1 no hydrogen 3.118 N/A PHE 91.A N THR 87.A O no hydrogen 3.054 N/A ARG 92.A N VAL 88.A O no hydrogen 2.854 N/A LYS 93.A N ARG 89.A O no hydrogen 2.902 N/A ILE 94.A N GLU 90.A O no hydrogen 2.987 N/A ALA 95.A N PHE 91.A O no hydrogen 2.874 N/A ASN 96.A N ARG 92.A O no hydrogen 3.080 N/A SER 97.A N ILE 94.A O no hydrogen 3.293 N/A SER 97.A OG ILE 94.A O no hydrogen 2.800 N/A TYR 100.A N SER 97.A O no hydrogen 3.331 N/A CYS 101.A N SER 97.A O no hydrogen 2.691 N/A CYS 101.A SG ASP 98.A O no hydrogen 3.557 N/A CYS 101.A SG THR 102.A O no hydrogen 3.927 N/A THR 102.A OG1 HIS 275.A O no hydrogen 2.732 N/A SER 106.A N GLU 110.A OE1 no hydrogen 2.616 N/A SER 106.A OG GLU 110.A OE1 no hydrogen 2.292 N/A GLU 110.A N GLU 107.A O no hydrogen 2.760 N/A LEU 111.A N GLU 107.A O no hydrogen 3.365 N/A GLU 112.A N PHE 108.A O no hydrogen 2.907 N/A ARG 113.A N GLU 109.A O no hydrogen 2.937 N/A LYS 114.A N GLU 110.A O no hydrogen 2.947 N/A LYS 114.A NZ ARG 104.A O no hydrogen 3.236 N/A TYR 115.A N LEU 111.A O no hydrogen 2.880 N/A TRP 116.A N GLU 112.A O no hydrogen 2.994 N/A TRP 116.A NE1 TYR 203.A OH no hydrogen 3.054 N/A LYS 117.A N ARG 113.A O no hydrogen 2.863 N/A ASN 118.A N LYS 114.A O no hydrogen 2.829 N/A ASN 118.A ND2 LYS 114.A O no hydrogen 2.937 N/A PHE 121.A N ASN 118.A O no hydrogen 2.917 N/A ASN 122.A ND2 LYS 99.A O no hydrogen 2.780 N/A TYR 126.A N ILE 65.A O no hydrogen 2.822 N/A GLY 127.A N PHE 172.A O no hydrogen 2.658 N/A ALA 128.A N TYR 126.A O no hydrogen 2.934 N/A VAL 130.A N LEU 170.A O no hydrogen 2.970 N/A THR 133.A OG1 GLU 281.A OE1 no hydrogen 3.389 N/A THR 133.A OG1 GLU 281.A OE2 no hydrogen 2.961 N/A LEU 134.A N GLU 281.A OE1 no hydrogen 3.033 N/A TYR 135.A N THR 133.A OG1 no hydrogen 2.903 N/A TYR 135.A OH TRP 142.A O no hydrogen 2.895 N/A GLU 136.A N PRO 49.A O no hydrogen 3.212 N/A HIS 138.A NE2 GLU 136.A OE1 no hydrogen 2.555 N/A VAL 139.A N GLU 136.A O no hydrogen 3.216 N/A ASN 143.A ND2 VAL 139.A O no hydrogen 3.061 N/A GLY 145.A N ASN 143.A OD1 no hydrogen 2.671 N/A ARG 146.A N ASN 143.A O no hydrogen 3.027 N/A ARG 146.A NH1 LYS 137.A O no hydrogen 2.947 N/A ARG 146.A NH2 LYS 137.A O no hydrogen 2.629 N/A ARG 146.A NH2 ASP 140.A OD1 no hydrogen 3.053 N/A ASP 152.A N THR 149.A O no hydrogen 2.923 N/A LEU 153.A N ILE 150.A O no hydrogen 2.929 N/A VAL 154.A N LEU 151.A O no hydrogen 2.935 N/A LYS 156.A N ASP 152.A O no hydrogen 3.314 N/A GLU 157.A N LEU 153.A O no hydrogen 2.753 N/A SER 158.A N VAL 154.A O no hydrogen 2.944 N/A GLY 159.A N GLU 155.A O no hydrogen 2.735 N/A GLY 164.A N THR 167.A OG1 no hydrogen 3.230 N/A VAL 165.A N ILE 162.A O no hydrogen 2.797 N/A ASN 166.A N ILE 162.A O no hydrogen 3.006 N/A TYR 169.A N SER 282.A O no hydrogen 2.940 N/A TYR 169.A OH GLU 163.A OE1 no hydrogen 3.284 N/A LEU 170.A N VAL 130.A O no hydrogen 2.547 N/A TYR 171.A N ALA 280.A O no hydrogen 2.836 N/A TYR 171.A OH ASP 129.A OD1 no hydrogen 3.389 N/A PHE 172.A N GLY 127.A O no hydrogen 2.711 N/A GLY 173.A N ASN 278.A O no hydrogen 2.891 N/A LYS 176.A N ASN 274.A O no hydrogen 3.371 N/A LYS 176.A NZ ASN 118.A O no hydrogen 2.694 N/A LYS 176.A NZ PHE 121.A O no hydrogen 2.437 N/A THR 177.A N MET 174.A O no hydrogen 3.191 N/A THR 177.A OG1 MET 174.A O no hydrogen 2.689 N/A SER 178.A N GLN 67.A OE1 no hydrogen 2.927 N/A SER 178.A OG GLN 78.A OE1 no hydrogen 3.116 N/A SER 178.A OG TYR 115.A OH no hydrogen 3.076 N/A PHE 179.A N GLY 272.A O no hydrogen 2.974 N/A TRP 181.A N THR 237.A O no hydrogen 2.968 N/A TRP 181.A NE1 ILE 239.A O no hydrogen 2.983 N/A HIS 182.A N HIS 270.A O no hydrogen 3.307 N/A HIS 182.A ND1 ALA 180.A O no hydrogen 2.612 N/A THR 183.A OG1 ASP 187.A OD1 no hydrogen 2.852 N/A ASP 187.A N GLU 184.A O no hydrogen 2.800 N/A LEU 188.A N ASP 185.A O no hydrogen 3.035 N/A TYR 189.A N PHE 285.A O no hydrogen 2.891 N/A TYR 189.A OH GLU 29.A OE2 no hydrogen 3.143 N/A TYR 189.A OH THR 287.A OG1 no hydrogen 2.784 N/A SER 190.A N THR 264.A O no hydrogen 2.948 N/A ILE 191.A N THR 283.A O no hydrogen 2.955 N/A ASN 192.A N MET 262.A O no hydrogen 2.941 N/A TYR 193.A N GLU 281.A O no hydrogen 2.865 N/A LEU 194.A N GLU 260.A O no hydrogen 3.102 N/A HIS 195.A N CYS 279.A O no hydrogen 2.818 N/A HIS 195.A ND1 TYR 53.A OH no hydrogen 2.815 N/A HIS 195.A NE2 GLU 281.A OE1 no hydrogen 2.889 N/A PHE 196.A N CYS 279.A O no hydrogen 3.488 N/A GLU 198.A N PHE 277.A O no hydrogen 2.941 N/A LYS 200.A N GLN 256.A O no hydrogen 2.948 N/A LYS 200.A NZ ASN 274.A OD1 no hydrogen 3.110 N/A SER 201.A N PHE 273.A O no hydrogen 2.841 N/A SER 201.A OG THR 255.A OG1 no hydrogen 3.296 N/A SER 201.A OG HIS 275.A NE2 no hydrogen 2.725 N/A TRP 202.A N VAL 254.A O no hydrogen 2.848 N/A TRP 202.A NE1 GLN 256.A OE1 no hydrogen 3.227 N/A TYR 203.A N ALA 271.A O no hydrogen 2.839 N/A TYR 203.A OH GLU 112.A OE1 no hydrogen 2.401 N/A SER 204.A N ASP 252.A O no hydrogen 2.867 N/A SER 204.A OG ALA 36.A O no hydrogen 3.017 N/A VAL 205.A N TYR 269.A O no hydrogen 2.925 N/A HIS 209.A N PRO 206.A O no hydrogen 2.843 N/A GLY 210.A N PRO 207.A O no hydrogen 2.924 N/A ARG 212.A N.A HIS 209.A O no hydrogen 2.939 N/A LEU 213.A N HIS 209.A O no hydrogen 3.420 N/A GLU 214.A N GLY 210.A O no hydrogen 2.990 N/A ARG 215.A N LYS 211.A O no hydrogen 2.670 N/A LEU 216.A N ARG 212.A O.A no hydrogen 2.850 N/A LEU 216.A N ARG 212.A O.B no hydrogen 2.819 N/A ALA 217.A N LEU 213.A O no hydrogen 2.730 N/A LYS 218.A N GLU 214.A O no hydrogen 2.882 N/A GLY 219.A N ARG 215.A O no hydrogen 3.007 N/A PHE 220.A N LEU 216.A O no hydrogen 3.014 N/A PHE 220.A N ALA 217.A O no hydrogen 2.974 N/A PHE 221.A N ALA 217.A O no hydrogen 2.842 N/A ALA 225.A N PHE 221.A O no hydrogen 3.196 N/A GLN 226.A N PRO 222.A O no hydrogen 2.986 N/A SER 227.A N GLY 223.A O no hydrogen 2.972 N/A CYS 228.A N SER 224.A O no hydrogen 2.977 N/A CYS 228.A SG HIS 234.A NE2 no hydrogen 3.671 N/A ARG 233.A N ALA 230.A O no hydrogen 3.034 N/A ARG 233.A NE VAL 298.A O no hydrogen 2.873 N/A ARG 233.A NH1 GLU 184.A O no hydrogen 3.001 N/A ARG 233.A NH2 ASP 187.A OD1 no hydrogen 2.655 N/A ARG 233.A NH2 VAL 298.A O no hydrogen 3.543 N/A HIS 234.A N PHE 231.A O no hydrogen 2.963 N/A LYS 235.A N LEU 232.A O no hydrogen 2.945 N/A LEU 238.A N PHE 76.A O no hydrogen 2.928 N/A SER 240.A N GLY 74.A O no hydrogen 2.950 N/A MET 243.A N SER 240.A O no hydrogen 3.060 N/A LYS 245.A N PRO 241.A O no hydrogen 2.959 N/A LYS 246.A N LEU 242.A O no hydrogen 2.893 N/A TYR 247.A N MET 243.A O no hydrogen 3.012 N/A TYR 247.A N LEU 244.A O no hydrogen 3.218 N/A GLY 248.A N LYS 245.A O no hydrogen 3.228 N/A ILE 249.A N LEU 244.A O no hydrogen 2.958 N/A ASP 252.A N SER 204.A O no hydrogen 2.975 N/A LYS 253.A N ASP 252.A OD1 no hydrogen 2.813 N/A VAL 254.A N TRP 202.A O no hydrogen 2.988 N/A THR 255.A OG1 SER 201.A OG no hydrogen 3.296 N/A GLN 256.A N LYS 200.A O no hydrogen 2.883 N/A GLN 256.A NE2 ASN 192.A O no hydrogen 3.458 N/A GLN 256.A NE2 ASN 192.A OD1 no hydrogen 3.325 N/A GLN 256.A NE2 GLU 260.A O no hydrogen 2.996 N/A GLU 257.A N.A GLU 260.A OE1 no hydrogen 2.748 N/A GLU 257.A N.B GLU 260.A OE1 no hydrogen 2.754 N/A GLY 259.A N LEU 194.A O no hydrogen 2.892 N/A PHE 261.A N VAL 41.A O no hydrogen 2.983 N/A MET 262.A N ASN 192.A O no hydrogen 2.840 N/A ILE 263.A N ALA 39.A O no hydrogen 2.892 N/A THR 264.A N SER 190.A O no hydrogen 2.953 N/A PHE 265.A N GLY 37.A O no hydrogen 3.042 N/A TYR 267.A OH GLU 214.A OE2 no hydrogen 2.833 N/A GLY 268.A N PHE 265.A O no hydrogen 2.890 N/A TYR 269.A OH GLU 214.A OE2 no hydrogen 2.743 N/A HIS 270.A N HIS 182.A O no hydrogen 3.139 N/A HIS 270.A ND1 GLY 268.A O no hydrogen 2.896 N/A ALA 271.A N TYR 203.A O no hydrogen 2.970 N/A GLY 272.A N PHE 179.A O no hydrogen 3.196 N/A PHE 273.A N SER 201.A O no hydrogen 2.963 N/A ASN 274.A N THR 177.A O no hydrogen 2.941 N/A ASN 274.A ND2 TYR 126.A OH no hydrogen 3.431 N/A ASN 274.A ND2 THR 177.A OG1 no hydrogen 3.107 N/A HIS 275.A N PRO 199.A O no hydrogen 2.971 N/A HIS 275.A NE2 SER 201.A OG no hydrogen 2.725 N/A ASN 278.A N GLY 173.A O no hydrogen 2.945 N/A ASN 278.A ND2 GLU 198.A O no hydrogen 3.178 N/A ASN 278.A ND2 PRO 199.A O no hydrogen 3.380 N/A ASN 278.A ND2 ASN 274.A OD1 no hydrogen 2.807 N/A CYS 279.A N PHE 196.A O no hydrogen 3.085 N/A ALA 280.A N TYR 171.A O no hydrogen 2.902 N/A GLU 281.A N TYR 193.A O no hydrogen 2.873 N/A SER 282.A N TYR 169.A O no hydrogen 2.902 N/A SER 282.A OG ILE 191.A O no hydrogen 2.523 N/A THR 283.A N ILE 191.A O no hydrogen 3.071 N/A THR 283.A OG1 VAL 165.A O no hydrogen 3.108 N/A THR 283.A OG1 THR 167.A O no hydrogen 2.864 N/A ASN 284.A ND2 GLU 184.A OE1 no hydrogen 3.280 N/A ASN 284.A ND2 TYR 189.A O no hydrogen 3.080 N/A PHE 285.A N TYR 189.A O no hydrogen 2.947 N/A THR 287.A OG1 TYR 189.A OH no hydrogen 2.784 N/A THR 287.A OG1 THR 341.A OG1 no hydrogen 3.204 N/A ARG 288.A N GLU 343.A OE2 no hydrogen 3.326 N/A ARG 289.A NE GLU 29.A OE1 no hydrogen 2.942 N/A ARG 289.A NE GLU 29.A OE2 no hydrogen 3.019 N/A ARG 289.A NH2 GLU 29.A OE2 no hydrogen 2.481 N/A TRP 290.A N THR 287.A O no hydrogen 2.886 N/A TRP 290.A NE1 MET 186.A O no hydrogen 3.040 N/A ILE 291.A N ARG 288.A O no hydrogen 2.959 N/A TYR 293.A OH HIS 337.A ND1 no hydrogen 2.945 N/A GLY 294.A N TRP 290.A O no hydrogen 2.831 N/A LYS 295.A N ILE 291.A O no hydrogen 2.934 N/A LYS 295.A N GLU 292.A O no hydrogen 2.946 N/A LYS 295.A NZ GLU 292.A OE1 no hydrogen 3.127 N/A LYS 295.A NZ GLN 319.A OE1 no hydrogen 2.756 N/A LYS 295.A NZ ASP 331.A OD2 no hydrogen 2.811 N/A GLN 296.A N.A GLU 292.A O no hydrogen 3.215 N/A GLN 296.A N.A TYR 293.A O no hydrogen 2.981 N/A GLN 296.A N.B GLU 292.A O no hydrogen 3.199 N/A GLN 296.A N.B TYR 293.A O no hydrogen 2.981 N/A GLN 296.A NE2.B THR 333.A O no hydrogen 2.760 N/A CYS 300.A SG HIS 234.A NE2 no hydrogen 3.682 N/A CYS 302.A SG HIS 234.A NE2 no hydrogen 3.278 N/A ARG 303.A NE ASP 305.A OD1 no hydrogen 3.301 N/A ARG 303.A NH2 ASP 305.A OD1 no hydrogen 3.316 N/A MET 306.A SD VAL 307.A O no hydrogen 3.254 N/A SER 310.A OG ASP 312.A OD1 no hydrogen 2.734 N/A VAL 315.A N MET 311.A O no hydrogen 2.926 N/A ARG 316.A N ASP 312.A O no hydrogen 2.852 N/A LYS 317.A N VAL 313.A O no hydrogen 2.936 N/A PHE 318.A N PHE 314.A O no hydrogen 2.876 N/A GLN 319.A N VAL 315.A O no hydrogen 2.639 N/A GLN 319.A NE2 GLU 292.A OE1 no hydrogen 3.400 N/A ARG 322.A N GLN 319.A O no hydrogen 3.352 N/A ARG 322.A NH1 THR 333.A OG1 no hydrogen 3.268 N/A TRP 326.A N ARG 322.A O no hydrogen 2.632 N/A LYS 327.A N TYR 323.A O no hydrogen 2.845 N/A LYS 327.A NZ ASP 312.A OD2 no hydrogen 2.737 N/A ALA 328.A N LYS 324.A O no hydrogen 3.041 N/A ALA 328.A N LEU 325.A O no hydrogen 3.221 N/A GLY 329.A N TRP 326.A O no hydrogen 2.793 N/A LYS 330.A N LEU 325.A O no hydrogen 2.837 N/A THR 333.A N ASP 331.A OD1 no hydrogen 3.280 N/A THR 333.A OG1 ASP 331.A OD1 no hydrogen 2.580 N/A HIS 337.A ND1 TYR 293.A OH no hydrogen 2.945 N/A THR 338.A N ASP 336.A OD1 no hydrogen 3.048 N/A THR 338.A OG1 ASP 336.A OD1 no hydrogen 3.106 N/A LEU 339.A N ASP 336.A O no hydrogen 3.232 N/A THR 341.A OG1 THR 287.A OG1 no hydrogen 3.204 N/A THR 341.A OG1 GLU 343.A OE1 no hydrogen 2.455 N/A GLU 343.A N GLU 343.A OE1 no hydrogen 2.604 N/A ALA 344.A N THR 341.A O no hydrogen 2.892 N/A ALA 345.A N PRO 342.A O no hydrogen 2.957 N/A PHE 347.A N ALA 344.A O no hydrogen 3.050 N/A LEU 348.A N ALA 344.A O no hydrogen 2.850 N/A