1A0RG

Heterotrimeric complex of phosducin/transducin beta-gamma
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
65
structure length
65
Chain Sequence
PVINIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Complex (transducer/transduction)
molecule keywords TRANSDUCIN (BETA SUBUNIT)
publication title Phosducin induces a structural change in transducin beta gamma.
pubmed doi rcsb
total genus 19
structure length 65
sequence length 65
ec nomenclature
pdb deposition date 1997-12-05
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.260.10 Few Secondary Structures Irregular G Protein Gi Gamma 2 Transducin (heterotrimeric G protein), gamma chain 1a0rG00
3V5WG 5TDHG 3CIKG 1B9XB 1GG2G 3KRWG 5HE2G 2TRCG 1OMWG 1GOTG 1TBGE 3SN6G 4PNKG 5KDOG 3PVWG 3AH8G 1GP2G 3KRXG 4MK0G 4KFMG 2BCJG 3PSCG 1A0RG 1B9YB 1XHMB 2PBIA 5HE1G 5HE3G 5HE0G 3PVUG
chains in the Genus database with same CATH superfamily
3V5WG 5TDHG 3CIKG 1B9XB 3KRWG 5HE2G 2TRCG 1OMWG 1GOTG 1TBGE 3SN6G 4PNKG 5KDOG 1HFES 1IOJA 3PVWG 3AH8G 1GP2G 3KRXG 4MK0G 4KFMG 2BCJG 3PVUG 3PSCG 1A0RG 1B9YB 1XHMB 2PBIA 5HE1G 5HE3G 5HE0G 1GG2G
chains in the Genus database with same CATH topology
3V5WG 5TDHG 3CIKG 1B9XB 1GG2G 3KRWG 5HE2G 2TRCG 1OMWG 1GOTG 1TBGE 3SN6G 4PNKG 5KDOG 3PVWG 3AH8G 1GP2G 3KRXG 4MK0G 4KFMG 2BCJG 3PSCG 1A0RG 1B9YB 1XHMB 2PBIA 5HE1G 5HE3G 5HE0G 3PVUG
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3V5W G;  5TDH G;  3CIK G;  1B9X B;  1GG2 G;  3KRW G;  5HE2 G;  2TRC G;  1OMW G;  1GOT G;  1TBG E;  3SN6 G;  4PNK G;  5KDO G;  3PVW G;  3AH8 G;  1GP2 G;  3KRX G;  4MK0 G;  4KFM G;  2BCJ G;  3PSC G;  1A0R G;  1B9Y B;  1XHM B;  2PBI A;  5HE1 G;  5HE3 G;  5HE0 G;  3PVU G; 
#chains in the Genus database with same CATH topology
 3V5W G;  5TDH G;  3CIK G;  1B9X B;  3KRW G;  5HE2 G;  2TRC G;  1OMW G;  1GOT G;  1TBG E;  3SN6 G;  4PNK G;  5KDO G;  1HFE S;  1IOJ A;  3PVW G;  3AH8 G;  1GP2 G;  3KRX G;  4MK0 G;  4KFM G;  2BCJ G;  3PVU G;  3PSC G;  1A0R G;  1B9Y B;  1XHM B;  2PBI A;  5HE1 G;  5HE3 G;  5HE0 G;  1GG2 G; 
#chains in the Genus database with same CATH homology
 3V5W G;  5TDH G;  3CIK G;  1B9X B;  1GG2 G;  3KRW G;  5HE2 G;  2TRC G;  1OMW G;  1GOT G;  1TBG E;  3SN6 G;  4PNK G;  5KDO G;  3PVW G;  3AH8 G;  1GP2 G;  3KRX G;  4MK0 G;  4KFM G;  2BCJ G;  3PSC G;  1A0R G;  1B9Y B;  1XHM B;  2PBI A;  5HE1 G;  5HE3 G;  5HE0 G;  3PVU G; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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