1A4EA

Catalase a from saccharomyces cerevisiae
Total Genus 151
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
151
sequence length
488
structure length
488
Chain Sequence
DVREDRVVTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSGAFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLTTPENQVAIHQVMILFSDRGTPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKTDQGIKNLTIEEATKIAGSNPDYCQQDLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLTKVWPQGQFPLRRVGKIVLNENPLNFFAQVEQAAFAPSTTVPYQEASADPVLQARLFSYADAHRYRLGPNFHQIPVNCPYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRPIQQHQEVWNGPAIPYHWATSPGDVDFVQARNLYRVLGKQPGQQKNLAYNIGIHVEGACPQIQQRVYDMFARVDKGLSEAIKKVAE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords CATALASE A
publication title Structure of catalase-A from Saccharomyces cerevisiae.
pubmed doi rcsb
total genus 151
structure length 488
sequence length 488
chains with identical sequence B, C, D
ec nomenclature ec 1.11.1.6: Catalase.
pdb deposition date 1998-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00199 Catalase Catalase
A PF06628 Catalase-rel Catalase-related immune-responsive
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.180.10 Mainly Beta Beta Barrel Catalase HpII, Chain A, domain 1 Catalase core domain 1a4eA00
4QOQA 4E37A 4ENQA 1GWHA 2XF2A 1CF9A 4CABA 4ENUA 4AUMA 1HBZA 1NM0A 1GWFA 4AJ9A 3P9SA 3PQ5A 1QF7A 3TTVA 4BFLA 1M7SA 4AUEA 3P9PA 2A9EA 1SI8A 5BV2P 4ENTA 1QWSA 3PQ2A 2XQ1A 1QWLA 1QWMA 4QONA 1F4JA 4B40A 3DY5A 3TTWA 2IQFA 2IUFA 4QORA 3HB6A 4QOPA 4ENWA 1GGFA 3PQ7A 3PQ3A 4B31A 1H6NA 2ISAA 1P7YA 1A4EA 4QOLA 3TTXA 4B5KA 4ENSA 1M85A 1GWEA 3P9QA 3PQ8A 3TTTA 3ZJ5A 4QOOA 1GGJA 1U5UA 3PQ6A 4QOMA 4ENRA 3EJ6A 1H7KA 3TTUA 1GGHA 4AUNA 4B2YA 4BIMA 1E93A 3P9RA 2CAGA 1P80A 1GGEA 1IPHA 1P81A 2CAHA 1MQFA 4ENVA 3PQ4A 4B7AA 1GG9A 4AULA 1SY7A 2J2MA 3VU3A 4ENPA 1P7ZA 3ZJ4A 1GGKA
chains in the Genus database with same CATH superfamily
4QOQA 4E37A 4ENQA 1GWHA 2XF2A 3RGPA 1CF9A 4CABA 1DGBA 1QQWA 4ENUA 4AUMA 1HBZA 1NM0A 8CATA 1GWFA 4AJ9A 3P9SA 3PQ5A 1QF7A 3TTVA 4BFLA 3E4WA 1M7SA 4AUEA 3P9PA 2A9EA 1SI8A 5BV2P 4ENTA 1QWSA 3PQ2A 2XQ1A 1QWLA 1QWMA 4QONA 1F4JA 4B40A 3DY5A 3TTWA 2IQFA 2IUFA 4QORA 3HB6A 4QOPA 4ENWA 1GGFA 3PQ7A 3PQ3A 4B31A 1H6NA 2ISAA 1P7YA 1A4EA 4QOLA 3TTXA 4B5KA 4ENSA 3RE8A 1DGGA 1M85A 1GWEA 1TGUA 1TH3A 3P9QA 3PQ8A 3TTTA 3RGSA 3ZJ5A 4QOOA 3E4YA 1GGJA 1U5UA 3PQ6A 1DGFA 1DGHB 3EJ6A 4QOMA 4ENRA 3J7BA 1H7KA 3TTUA 5GKNA 1TH2A 1GGHA 4BLCA 1DGHA 1TH4A 4AUNA 7CATA 3NWLA 4B2YA 4BIMA 1E93A 3P9RA 4B7GA 2CAGA 1P80A 4B7FA 1GGEA 1IPHA 1P81A 4B7HA 2CAHA 1MQFA 4ENVA 3PQ4A 4B7AA 1GG9A 4AULA 1SY7A 2J2MA 3VU3A 4ENPA 1P7ZA 3ZJ4A 1GGKA
chains in the Genus database with same CATH topology
4QOQA 4E37A 4ENQA 1GWHA 2XF2A 1CF9A 4CABA 4ENUA 4AUMA 1HBZA 1NM0A 1GWFA 4AJ9A 3P9SA 3PQ5A 1QF7A 3TTVA 4BFLA 1M7SA 4AUEA 3P9PA 2A9EA 1SI8A 5BV2P 4ENTA 1QWSA 3PQ2A 2XQ1A 1QWLA 1QWMA 4QONA 1F4JA 4B40A 3DY5A 3TTWA 2IQFA 2IUFA 4QORA 3HB6A 4QOPA 4ENWA 1GGFA 3PQ7A 3PQ3A 4B31A 1H6NA 2ISAA 1P7YA 1A4EA 4QOLA 3TTXA 4B5KA 4ENSA 1M85A 1GWEA 3P9QA 3PQ8A 3TTTA 3ZJ5A 4QOOA 1GGJA 1U5UA 3PQ6A 4QOMA 4ENRA 3EJ6A 1H7KA 3TTUA 1GGHA 4AUNA 4B2YA 4BIMA 1E93A 3P9RA 2CAGA 1P80A 1GGEA 1IPHA 1P81A 2CAHA 1MQFA 4ENVA 3PQ4A 4B7AA 1GG9A 4AULA 1SY7A 2J2MA 3VU3A 4ENPA 1P7ZA 3ZJ4A 1GGKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QOQ A;  4E37 A;  4ENQ A;  1GWH A;  2XF2 A;  1CF9 A;  4CAB A;  4ENU A;  4AUM A;  1HBZ A;  1NM0 A;  1GWF A;  4AJ9 A;  3P9S A;  3PQ5 A;  1QF7 A;  3TTV A;  4BFL A;  1M7S A;  4AUE A;  3P9P A;  2A9E A;  1SI8 A;  5BV2 P;  4ENT A;  1QWS A;  3PQ2 A;  2XQ1 A;  1QWL A;  1QWM A;  4QON A;  1F4J A;  4B40 A;  3DY5 A;  3TTW A;  2IQF A;  2IUF A;  4QOR A;  3HB6 A;  4QOP A;  4ENW A;  1GGF A;  3PQ7 A;  3PQ3 A;  4B31 A;  1H6N A;  2ISA A;  1P7Y A;  1A4E A;  4QOL A;  3TTX A;  4B5K A;  4ENS A;  1M85 A;  1GWE A;  3P9Q A;  3PQ8 A;  3TTT A;  3ZJ5 A;  4QOO A;  1GGJ A;  1U5U A;  3PQ6 A;  4QOM A;  4ENR A;  3EJ6 A;  1H7K A;  3TTU A;  1GGH A;  4AUN A;  4B2Y A;  4BIM A;  1E93 A;  3P9R A;  2CAG A;  1P80 A;  1GGE A;  1IPH A;  1P81 A;  2CAH A;  1MQF A;  4ENV A;  3PQ4 A;  4B7A A;  1GG9 A;  4AUL A;  1SY7 A;  2J2M A;  3VU3 A;  4ENP A;  1P7Z A;  3ZJ4 A;  1GGK A; 
#chains in the Genus database with same CATH topology
 4QOQ A;  4E37 A;  4ENQ A;  1GWH A;  2XF2 A;  3RGP A;  1CF9 A;  4CAB A;  1DGB A;  1QQW A;  4ENU A;  4AUM A;  1HBZ A;  1NM0 A;  8CAT A;  1GWF A;  4AJ9 A;  3P9S A;  3PQ5 A;  1QF7 A;  3TTV A;  4BFL A;  3E4W A;  1M7S A;  4AUE A;  3P9P A;  2A9E A;  1SI8 A;  5BV2 P;  4ENT A;  1QWS A;  3PQ2 A;  2XQ1 A;  1QWL A;  1QWM A;  4QON A;  1F4J A;  4B40 A;  3DY5 A;  3TTW A;  2IQF A;  2IUF A;  4QOR A;  3HB6 A;  4QOP A;  4ENW A;  1GGF A;  3PQ7 A;  3PQ3 A;  4B31 A;  1H6N A;  2ISA A;  1P7Y A;  1A4E A;  4QOL A;  3TTX A;  4B5K A;  4ENS A;  3RE8 A;  1DGG A;  1M85 A;  1GWE A;  1TGU A;  1TH3 A;  3P9Q A;  3PQ8 A;  3TTT A;  3RGS A;  3ZJ5 A;  4QOO A;  3E4Y A;  1GGJ A;  1U5U A;  3PQ6 A;  1DGF A;  1DGH B;  3EJ6 A;  4QOM A;  4ENR A;  3J7B A;  1H7K A;  3TTU A;  5GKN A;  1TH2 A;  1GGH A;  4BLC A;  1DGH A;  1TH4 A;  4AUN A;  7CAT A;  3NWL A;  4B2Y A;  4BIM A;  1E93 A;  3P9R A;  4B7G A;  2CAG A;  1P80 A;  4B7F A;  1GGE A;  1IPH A;  1P81 A;  4B7H A;  2CAH A;  1MQF A;  4ENV A;  3PQ4 A;  4B7A A;  1GG9 A;  4AUL A;  1SY7 A;  2J2M A;  3VU3 A;  4ENP A;  1P7Z A;  3ZJ4 A;  1GGK A; 
#chains in the Genus database with same CATH homology
 4QOQ A;  4E37 A;  4ENQ A;  1GWH A;  2XF2 A;  1CF9 A;  4CAB A;  4ENU A;  4AUM A;  1HBZ A;  1NM0 A;  1GWF A;  4AJ9 A;  3P9S A;  3PQ5 A;  1QF7 A;  3TTV A;  4BFL A;  1M7S A;  4AUE A;  3P9P A;  2A9E A;  1SI8 A;  5BV2 P;  4ENT A;  1QWS A;  3PQ2 A;  2XQ1 A;  1QWL A;  1QWM A;  4QON A;  1F4J A;  4B40 A;  3DY5 A;  3TTW A;  2IQF A;  2IUF A;  4QOR A;  3HB6 A;  4QOP A;  4ENW A;  1GGF A;  3PQ7 A;  3PQ3 A;  4B31 A;  1H6N A;  2ISA A;  1P7Y A;  1A4E A;  4QOL A;  3TTX A;  4B5K A;  4ENS A;  1M85 A;  1GWE A;  3P9Q A;  3PQ8 A;  3TTT A;  3ZJ5 A;  4QOO A;  1GGJ A;  1U5U A;  3PQ6 A;  4QOM A;  4ENR A;  3EJ6 A;  1H7K A;  3TTU A;  1GGH A;  4AUN A;  4B2Y A;  4BIM A;  1E93 A;  3P9R A;  2CAG A;  1P80 A;  1GGE A;  1IPH A;  1P81 A;  2CAH A;  1MQF A;  4ENV A;  3PQ4 A;  4B7A A;  1GG9 A;  4AUL A;  1SY7 A;  2J2M A;  3VU3 A;  4ENP A;  1P7Z A;  3ZJ4 A;  1GGK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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