1ACAA

Three-dimensional structure of the complex between acyl-coenzyme a binding protein and palmitoyl-coenzyme a
Total Genus 33
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
33
sequence length
86
structure length
86
Chain Sequence
SQAEFDKAAEEVKHLKTKPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAKWDAWNELKGTSKEDAMKAYIDKVEELKKKYGI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Acyl-coenzyme a binding protein
molecule keywords ACYL-COENZYME A BINDING PROTEIN
publication title Three-dimensional structure of the complex between acyl-coenzyme A binding protein and palmitoyl-coenzyme A.
pubmed doi rcsb
source organism Bos taurus
total genus 33
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1992-11-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00887 ACBP Acyl CoA binding protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.80.10 Mainly Alpha Up-down Bundle Acyl-CoA Binding Protein Acyl-CoA Binding Protein 1acaA00
3AU4A 1Y19B 3FP5A 3U8ZA 2AEHA 1GC7A 2EMSA 2HRJA 4NY0A 1ST7A 4P7IA 4DXAB 2CQUA 1NI2A 3X23A 1H4RA 2D11A 4ZRKA 1EF1A 2I1KA 1ISNA 2D10A 2I1JA 4HDQA 4CYEA 3PZDA 1HB6A 1NVLA 2ZPYA 4YL8A 2RQ1A 2LBBA 1GC6A 2FDQA 2J0JA 3AU5A 2ABDA 2J0MA 4EKUA 2AL6A 3IVFA 2FJ9A 3PVLA 1MIXA 1SGHA 5IJMA 1HBKA 4ZRJA 4ZRIA 1GG3A 3EPYA 1MK7B 3QIJA 3FLVA 4HDOA 1J19A 2D2QA 2J0KA 1MIZB 3BINA 2CB8A 3U7DA 4F7GA 1E5WA 1NTIA 1HB8A 1ACAA 1MK9B 2EMTA 3WA0A 3G9WA 3ZDTA 2HE7A 2WH5A 2COPA 2YVCA
chains in the Genus database with same CATH superfamily
3AU4A 1GC7A 4DXAB 1ST7A 3E66A 2CQUA 1DIKA 4CYEA 1KBLA 1NVLA 2J0MA 1SGHA 4ILHA 4ZRJA 4ILJA 4TKNA 3E9PA 2D2QA 4F7GA 1HB8A 2COPA 2X0SA 1KC7A 4JKAA 3U8ZA 2HRJA 4JKGB 1H4RA 4HDQA 3SBGA 3E9LA 4YL8A 2LBBA 1GC6A 2J0JA 4JKBA 2AL6A 3IVFA 3PVLA 4JKHA 2DIKA 1HBKA 3EPYA 1MK7B 3QIJA 1J19A 2J0KA 3BINA 1MIZB 1E5WA 1NTIA 1MK9B 3WA0A 1Y19B 4NY0A 4P7IA 4JKGA 4ZRKA 1EF1A 2I1KA 2D10A 3PZDA 4JKCA 2RQ1A 2FDQA 5JVLA 4ILGB 4JK8A 1MIXA 3SBTA 5IJMA 4JKFA 4HDOA 3U7DA 2CB8A 1ACAA 2HE7A 2WH5A 2I1JA 3FP5A 2AEHA 2EMSA 3X23A 1NI2A 2D11A 1ISNA 1HB6A 3E9OA 2ZPYA 3AU5A 2ABDA 4EKUA 1VBGA 4JK9A 2FJ9A 3ENBA 2R82A 1VBHA 4ZRIA 4GXBA 1GG3A 4JKEA 4JKDA 3FLVA 1GGOA 2EMTA 3G9WA 3ZDTA 1JDEA 4JK7A 2YVCA
chains in the Genus database with same CATH topology
3AU4A 1GC7A 4DXAB 1ST7A 3E66A 2CQUA 1DIKA 4CYEA 1KBLA 1NVLA 2J0MA 1SGHA 4ILHA 4ZRJA 4ILJA 4TKNA 3E9PA 2D2QA 4F7GA 1HB8A 2COPA 2X0SA 1KC7A 4JKAA 3U8ZA 2HRJA 4JKGB 1H4RA 4HDQA 3SBGA 3E9LA 4YL8A 2LBBA 1GC6A 2J0JA 4JKBA 2AL6A 3IVFA 3PVLA 4JKHA 2DIKA 1HBKA 3EPYA 1MK7B 3QIJA 1J19A 2J0KA 3BINA 1MIZB 1E5WA 1NTIA 1MK9B 3WA0A 1Y19B 4NY0A 4P7IA 4JKGA 4ZRKA 1EF1A 2I1KA 2D10A 3PZDA 4JKCA 2RQ1A 2FDQA 5JVLA 4ILGB 4JK8A 1MIXA 3SBTA 5IJMA 4JKFA 4HDOA 3U7DA 2CB8A 1ACAA 2HE7A 2WH5A 2I1JA 3FP5A 2AEHA 2EMSA 3X23A 1NI2A 2D11A 1ISNA 1HB6A 3E9OA 2ZPYA 3AU5A 2ABDA 4EKUA 1VBGA 4JK9A 2FJ9A 3ENBA 2R82A 1VBHA 4ZRIA 4GXBA 1GG3A 4JKEA 4JKDA 3FLVA 1GGOA 2EMTA 3G9WA 3ZDTA 1JDEA 4JK7A 2YVCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AU4 A;  1Y19 B;  3FP5 A;  3U8Z A;  2AEH A;  1GC7 A;  2EMS A;  2HRJ A;  4NY0 A;  1ST7 A;  4P7I A;  4DXA B;  2CQU A;  1NI2 A;  3X23 A;  1H4R A;  2D11 A;  4ZRK A;  1EF1 A;  2I1K A;  1ISN A;  2D10 A;  2I1J A;  4HDQ A;  4CYE A;  3PZD A;  1HB6 A;  1NVL A;  2ZPY A;  4YL8 A;  2RQ1 A;  2LBB A;  1GC6 A;  2FDQ A;  2J0J A;  3AU5 A;  2ABD A;  2J0M A;  4EKU A;  2AL6 A;  3IVF A;  2FJ9 A;  3PVL A;  1MIX A;  1SGH A;  5IJM A;  1HBK A;  4ZRJ A;  4ZRI A;  1GG3 A;  3EPY A;  1MK7 B;  3QIJ A;  3FLV A;  4HDO A;  1J19 A;  2D2Q A;  2J0K A;  1MIZ B;  3BIN A;  2CB8 A;  3U7D A;  4F7G A;  1E5W A;  1NTI A;  1HB8 A;  1ACA A;  1MK9 B;  2EMT A;  3WA0 A;  3G9W A;  3ZDT A;  2HE7 A;  2WH5 A;  2COP A;  2YVC A; 
#chains in the Genus database with same CATH topology
 3AU4 A;  1GC7 A;  4DXA B;  1ST7 A;  3E66 A;  2CQU A;  1DIK A;  4CYE A;  1KBL A;  1NVL A;  2J0M A;  1SGH A;  4ILH A;  4ZRJ A;  4ILJ A;  4TKN A;  3E9P A;  2D2Q A;  4F7G A;  1HB8 A;  2COP A;  2X0S A;  1KC7 A;  4JKA A;  3U8Z A;  2HRJ A;  4JKG B;  1H4R A;  4HDQ A;  3SBG A;  3E9L A;  4YL8 A;  2LBB A;  1GC6 A;  2J0J A;  4JKB A;  2AL6 A;  3IVF A;  3PVL A;  4JKH A;  2DIK A;  1HBK A;  3EPY A;  1MK7 B;  3QIJ A;  1J19 A;  2J0K A;  3BIN A;  1MIZ B;  1E5W A;  1NTI A;  1MK9 B;  3WA0 A;  1Y19 B;  4NY0 A;  4P7I A;  4JKG A;  4ZRK A;  1EF1 A;  2I1K A;  2D10 A;  3PZD A;  4JKC A;  2RQ1 A;  2FDQ A;  5JVL A;  4ILG B;  4JK8 A;  1MIX A;  3SBT A;  5IJM A;  4JKF A;  4HDO A;  3U7D A;  2CB8 A;  1ACA A;  2HE7 A;  2WH5 A;  2I1J A;  3FP5 A;  2AEH A;  2EMS A;  3X23 A;  1NI2 A;  2D11 A;  1ISN A;  1HB6 A;  3E9O A;  2ZPY A;  3AU5 A;  2ABD A;  4EKU A;  1VBG A;  4JK9 A;  2FJ9 A;  3ENB A;  2R82 A;  1VBH A;  4ZRI A;  4GXB A;  1GG3 A;  4JKE A;  4JKD A;  3FLV A;  1GGO A;  2EMT A;  3G9W A;  3ZDT A;  1JDE A;  4JK7 A;  2YVC A; 
#chains in the Genus database with same CATH homology
 3AU4 A;  1GC7 A;  4DXA B;  1ST7 A;  3E66 A;  2CQU A;  1DIK A;  4CYE A;  1KBL A;  1NVL A;  2J0M A;  1SGH A;  4ILH A;  4ZRJ A;  4ILJ A;  4TKN A;  3E9P A;  2D2Q A;  4F7G A;  1HB8 A;  2COP A;  2X0S A;  1KC7 A;  4JKA A;  3U8Z A;  2HRJ A;  4JKG B;  1H4R A;  4HDQ A;  3SBG A;  3E9L A;  4YL8 A;  2LBB A;  1GC6 A;  2J0J A;  4JKB A;  2AL6 A;  3IVF A;  3PVL A;  4JKH A;  2DIK A;  1HBK A;  3EPY A;  1MK7 B;  3QIJ A;  1J19 A;  2J0K A;  3BIN A;  1MIZ B;  1E5W A;  1NTI A;  1MK9 B;  3WA0 A;  1Y19 B;  4NY0 A;  4P7I A;  4JKG A;  4ZRK A;  1EF1 A;  2I1K A;  2D10 A;  3PZD A;  4JKC A;  2RQ1 A;  2FDQ A;  5JVL A;  4ILG B;  4JK8 A;  1MIX A;  3SBT A;  5IJM A;  4JKF A;  4HDO A;  3U7D A;  2CB8 A;  1ACA A;  2HE7 A;  2WH5 A;  2I1J A;  3FP5 A;  2AEH A;  2EMS A;  3X23 A;  1NI2 A;  2D11 A;  1ISN A;  1HB6 A;  3E9O A;  2ZPY A;  3AU5 A;  2ABD A;  4EKU A;  1VBG A;  4JK9 A;  2FJ9 A;  3ENB A;  2R82 A;  1VBH A;  4ZRI A;  4GXB A;  1GG3 A;  4JKE A;  4JKD A;  3FLV A;  1GGO A;  2EMT A;  3G9W A;  3ZDT A;  1JDE A;  4JK7 A;  2YVC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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