1AEIA

Crystal structure of the annexin xii hexamer
Total Genus 127
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
127
sequence length
315
structure length
315
Chain Sequence
VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQAGEGQIGTDESRFNAVLATRSYPQLHQIFHEYSKISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKSLYEFIADDCSGDYKDLLLQITGH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Calcium/phospholipid-binding
molecule keywords ANNEXIN XII
publication title Crystal structure of the annexin XII hexamer and implications for bilayer insertion.
pubmed doi rcsb
source organism Hydra vulgaris
total genus 127
structure length 315
sequence length 315
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 1995-09-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1aeiA01
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1aeiA04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1aeiA02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1aeiA03
1W7BA 2RANA 1W45A 2II2A 1G5NA 1AVRA 2IICA 1BCWA 1ANXA 1YIIA 2H0LA 1YJ0A 2H0MA 4EVFA 2ZHJA 4HREA 1HVGA 1BCYA 1AVCA 1HVDA 2H0KA 1I4AA 1HAKA 2Q4CA 1HM6A 1ALAA 4X9PA 3BRXA 1BC0A 1MCXA 2HYUA 1AIIA 1W3WA 1YCNA 2ZHIA 4MDUA 1BO9A 1BCZA 1AXNA 2XO3A 1A8BA 2ZOCA 4EVHA 1ANWA 1BC1A 1AEIA 1A8AA 1DM5A 1BC3A 1N42A 2HYWA 2XO2A 1N00A 4MDVA 1HVEA 2IE6A 1XJLA 1N44A 1SAVA 2IE7A 2HYVA 1ANNA 1AOWA 1AVHA 1DK5A 1M9IA 1HVFA 1N41A
chains in the Genus database with same CATH superfamily
3ABOA 2RANA 1HVFA 3USWA 3SWVA 1RE0B 2H0LA 3SOHB 3TW5A 1I4AA 1PBVA 2VXGA 1MCXA 1AIIA 2ZHIA 1BC1A 2XO2A 4FQ0C 1N00A 4JWLA 1QC7A 4KN7X 3USYA 1DK5A 3AJCA 3ABRA 4D7QA 1AVRA 2IICA 1BCWA 1YIIA 1C1KA 4L5MA 4HREA 1AVCA 2H0KA 1HAKA 4D7RA 4Z21A 1R4AE 4MDUA 4C7PA 4A4PA 1BO9A 2XO3A 1ANWA 1A8AA 1N42A 1S9DE 4KMUX 2IE6A 3ANYA 1R8SE 1G5NA 1R8ME 1ANXA 2R0DA 1Q8DA 2H0MA 1BC9A 1HVGA 1BCYA 3AO0A 1HVDA 4OIYA 1XSZA 1ALAA 1BC0A 1LKVX 1W3WA 1YCNA 1BCZA 2ZOCA 2HYWA 2QEZA 2IE7A 4JK1X 4JMOA 1ANNA 1AOWA 3HJLA 2II2A 1M9IA 1W7BA 1W45A 1UPTB 3LTLA 4Q2SA 3L8NA 1YJ0A 4C0AA 2R09A 4EVFA 2ZHJA 2K6XA 1R8QE 4JMIA 2Q4CA 1HM6A 4KN4X 4X9PA 3BRXA 1KU1A 2HSNA 2HYUA 4JXHA 3ABQA 1AXNA 1A8BA 4EVHA 1DM5A 1AEIA 1XT0B 1BC3A 4FHRB 4MDVA 1HVEA 3ABSA 1XJLA 1N44A 1SAVA 2HYVA 1AVHA 2OY9A 1YGMA 1N41A
chains in the Genus database with same CATH topology
1W7BA 2RANA 1W45A 2II2A 1G5NA 1AVRA 2IICA 1BCWA 1ANXA 1YIIA 2H0LA 1YJ0A 2H0MA 4EVFA 2ZHJA 4HREA 1HVGA 1BCYA 1AVCA 1HVDA 2H0KA 1I4AA 1HAKA 2Q4CA 1HM6A 1ALAA 4X9PA 3BRXA 1BC0A 1MCXA 2HYUA 1AIIA 1W3WA 1YCNA 2ZHIA 4MDUA 1BO9A 1BCZA 1AXNA 2XO3A 1A8BA 2ZOCA 4EVHA 1ANWA 1BC1A 1AEIA 1A8AA 1DM5A 1BC3A 1N42A 2HYWA 2XO2A 1N00A 4MDVA 1HVEA 2IE6A 1XJLA 1N44A 1SAVA 2IE7A 2HYVA 1ANNA 1AOWA 1AVHA 1DK5A 1M9IA 1HVFA 1N41A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W7B A;  2RAN A;  1W45 A;  2II2 A;  1G5N A;  1AVR A;  2IIC A;  1BCW A;  1ANX A;  1YII A;  2H0L A;  1YJ0 A;  2H0M A;  4EVF A;  2ZHJ A;  4HRE A;  1HVG A;  1BCY A;  1AVC A;  1HVD A;  2H0K A;  1I4A A;  1HAK A;  2Q4C A;  1HM6 A;  1ALA A;  4X9P A;  3BRX A;  1BC0 A;  1MCX A;  2HYU A;  1AII A;  1W3W A;  1YCN A;  2ZHI A;  4MDU A;  1BO9 A;  1BCZ A;  1AXN A;  2XO3 A;  1A8B A;  2ZOC A;  4EVH A;  1ANW A;  1BC1 A;  1AEI A;  1A8A A;  1DM5 A;  1BC3 A;  1N42 A;  2HYW A;  2XO2 A;  1N00 A;  4MDV A;  1HVE A;  2IE6 A;  1XJL A;  1N44 A;  1SAV A;  2IE7 A;  2HYV A;  1ANN A;  1AOW A;  1AVH A;  1DK5 A;  1M9I A;  1HVF A;  1N41 A; 
#chains in the Genus database with same CATH topology
 3ABO A;  2RAN A;  1HVF A;  3USW A;  3SWV A;  1RE0 B;  2H0L A;  3SOH B;  3TW5 A;  1I4A A;  1PBV A;  2VXG A;  1MCX A;  1AII A;  2ZHI A;  1BC1 A;  2XO2 A;  4FQ0 C;  1N00 A;  4JWL A;  1QC7 A;  4KN7 X;  3USY A;  1DK5 A;  3AJC A;  3ABR A;  4D7Q A;  1AVR A;  2IIC A;  1BCW A;  1YII A;  1C1K A;  4L5M A;  4HRE A;  1AVC A;  2H0K A;  1HAK A;  4D7R A;  4Z21 A;  1R4A E;  4MDU A;  4C7P A;  4A4P A;  1BO9 A;  2XO3 A;  1ANW A;  1A8A A;  1N42 A;  1S9D E;  4KMU X;  2IE6 A;  3ANY A;  1R8S E;  1G5N A;  1R8M E;  1ANX A;  2R0D A;  1Q8D A;  2H0M A;  1BC9 A;  1HVG A;  1BCY A;  3AO0 A;  1HVD A;  4OIY A;  1XSZ A;  1ALA A;  1BC0 A;  1LKV X;  1W3W A;  1YCN A;  1BCZ A;  2ZOC A;  2HYW A;  2QEZ A;  2IE7 A;  4JK1 X;  4JMO A;  1ANN A;  1AOW A;  3HJL A;  2II2 A;  1M9I A;  1W7B A;  1W45 A;  1UPT B;  3LTL A;  4Q2S A;  3L8N A;  1YJ0 A;  4C0A A;  2R09 A;  4EVF A;  2ZHJ A;  2K6X A;  1R8Q E;  4JMI A;  2Q4C A;  1HM6 A;  4KN4 X;  4X9P A;  3BRX A;  1KU1 A;  2HSN A;  2HYU A;  4JXH A;  3ABQ A;  1AXN A;  1A8B A;  4EVH A;  1DM5 A;  1AEI A;  1XT0 B;  1BC3 A;  4FHR B;  4MDV A;  1HVE A;  3ABS A;  1XJL A;  1N44 A;  1SAV A;  2HYV A;  1AVH A;  2OY9 A;  1YGM A;  1N41 A; 
#chains in the Genus database with same CATH homology
 1W7B A;  2RAN A;  1W45 A;  2II2 A;  1G5N A;  1AVR A;  2IIC A;  1BCW A;  1ANX A;  1YII A;  2H0L A;  1YJ0 A;  2H0M A;  4EVF A;  2ZHJ A;  4HRE A;  1HVG A;  1BCY A;  1AVC A;  1HVD A;  2H0K A;  1I4A A;  1HAK A;  2Q4C A;  1HM6 A;  1ALA A;  4X9P A;  3BRX A;  1BC0 A;  1MCX A;  2HYU A;  1AII A;  1W3W A;  1YCN A;  2ZHI A;  4MDU A;  1BO9 A;  1BCZ A;  1AXN A;  2XO3 A;  1A8B A;  2ZOC A;  4EVH A;  1ANW A;  1BC1 A;  1AEI A;  1A8A A;  1DM5 A;  1BC3 A;  1N42 A;  2HYW A;  2XO2 A;  1N00 A;  4MDV A;  1HVE A;  2IE6 A;  1XJL A;  1N44 A;  1SAV A;  2IE7 A;  2HYV A;  1ANN A;  1AOW A;  1AVH A;  1DK5 A;  1M9I A;  1HVF A;  1N41 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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