1AJ8A

Citrate synthase from pyrococcus furiosus
Total Genus 132
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
132
sequence length
371
structure length
371
Chain Sequence
LAKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIMEALPKNTHPMGALRTIISYLGNIDDSGDIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKLGDKKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIPIELYTTIFAMGRIAGWTAHLAEYVSHNRIIRPRLQYVGEIGKKYLPIELRR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords CITRATE SYNTHASE
publication title The crystal structure of citrate synthase from the hyperthermophilic archaeon pyrococcus furiosus at 1.9 A resolution,.
pubmed doi rcsb
source organism Pyrococcus furiosus
total genus 132
structure length 371
sequence length 371
chains with identical sequence B
ec nomenclature ec 2.3.3.16: Citrate synthase (unknown stereospecificity).
pdb deposition date 1997-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00285 Citrate_synt Citrate synthase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.230.10 Mainly Alpha Orthogonal Bundle Cytochrome p450-Terp; domain 2 Cytochrome P450-Terp, domain 2 1aj8A02
1.10.580.10 Mainly Alpha Orthogonal Bundle Citrate Synthase; domain 1 Citrate Synthase, domain 1 1aj8A01
2P2WA 4E6YA 1CTSA 4JAFA 4CTSA 6CTSA 2H12A 2IBPA 5CSCA 2C6XA 2R26A 3O8JA 1AJ8A 1CSRA 4G6BA 5CSCB 2CTSA 3HWKA 1CSCA 1NXGA 4TVMA 4JAEA 2R9EA 1AMZA 1NXEA 1IOMA 1VGMA 1AL6A 6CSCA 4JAGA 3ENJA 1CSSA 1O7XA 1A59A 1OWBA 1OWCA 5CTSA 2IFCA 3CSCA 1CSIA 2CSCA 3TQGA 4JADA 1VGPA 3MSUA 4YBOA 1IXEA 1CSHA 4CSCA 4XGHA
chains in the Genus database with same CATH superfamily
2P2WA 4E6YA 1CTSA 4JAFA 4CTSA 6CTSA 2H12A 2IBPA 5CSCA 2C6XA 2R26A 3O8JA 1AJ8A 1CSRA 4G6BA 5CSCB 2CTSA 3HWKA 1CSCA 1NXGA 4TVMA 4JAEA 2R9EA 1AMZA 1NXEA 1IOMA 1VGMA 1AL6A 6CSCA 4JAGA 3ENJA 1CSSA 1O7XA 1A59A 1OWBA 1OWCA 5CTSA 2IFCA 3CSCA 1CSIA 2CSCA 3TQGA 4JADA 1VGPA 3MSUA 4YBOA 1IXEA 1CSHA 4CSCA 4XGHA
chains in the Genus database with same CATH topology
2P2WA 4E6YA 1CTSA 4JAFA 4CTSA 6CTSA 2H12A 2IBPA 5CSCA 2C6XA 2R26A 3O8JA 1AJ8A 1CSRA 4G6BA 5CSCB 2CTSA 3HWKA 1CSCA 1NXGA 4TVMA 4JAEA 2R9EA 1AMZA 1NXEA 1IOMA 1VGMA 1AL6A 6CSCA 4JAGA 3ENJA 1CSSA 1O7XA 1A59A 1OWBA 1OWCA 5CTSA 2IFCA 3CSCA 1CSIA 2CSCA 3TQGA 4JADA 1VGPA 3MSUA 4YBOA 1IXEA 1CSHA 4CSCA 4XGHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2P2W A;  4E6Y A;  1CTS A;  4JAF A;  4CTS A;  6CTS A;  2H12 A;  2IBP A;  5CSC A;  2C6X A;  2R26 A;  3O8J A;  1AJ8 A;  1CSR A;  4G6B A;  5CSC B;  2CTS A;  3HWK A;  1CSC A;  1NXG A;  4TVM A;  4JAE A;  2R9E A;  1AMZ A;  1NXE A;  1IOM A;  1VGM A;  1AL6 A;  6CSC A;  4JAG A;  3ENJ A;  1CSS A;  1O7X A;  1A59 A;  1OWB A;  1OWC A;  5CTS A;  2IFC A;  3CSC A;  1CSI A;  2CSC A;  3TQG A;  4JAD A;  1VGP A;  3MSU A;  4YBO A;  1IXE A;  1CSH A;  4CSC A;  4XGH A; 
#chains in the Genus database with same CATH topology
 2P2W A;  4E6Y A;  1CTS A;  4JAF A;  4CTS A;  6CTS A;  2H12 A;  2IBP A;  5CSC A;  2C6X A;  2R26 A;  3O8J A;  1AJ8 A;  1CSR A;  4G6B A;  5CSC B;  2CTS A;  3HWK A;  1CSC A;  1NXG A;  4TVM A;  4JAE A;  2R9E A;  1AMZ A;  1NXE A;  1IOM A;  1VGM A;  1AL6 A;  6CSC A;  4JAG A;  3ENJ A;  1CSS A;  1O7X A;  1A59 A;  1OWB A;  1OWC A;  5CTS A;  2IFC A;  3CSC A;  1CSI A;  2CSC A;  3TQG A;  4JAD A;  1VGP A;  3MSU A;  4YBO A;  1IXE A;  1CSH A;  4CSC A;  4XGH A; 
#chains in the Genus database with same CATH homology
 2P2W A;  4E6Y A;  1CTS A;  4JAF A;  4CTS A;  6CTS A;  2H12 A;  2IBP A;  5CSC A;  2C6X A;  2R26 A;  3O8J A;  1AJ8 A;  1CSR A;  4G6B A;  5CSC B;  2CTS A;  3HWK A;  1CSC A;  1NXG A;  4TVM A;  4JAE A;  2R9E A;  1AMZ A;  1NXE A;  1IOM A;  1VGM A;  1AL6 A;  6CSC A;  4JAG A;  3ENJ A;  1CSS A;  1O7X A;  1A59 A;  1OWB A;  1OWC A;  5CTS A;  2IFC A;  3CSC A;  1CSI A;  2CSC A;  3TQG A;  4JAD A;  1VGP A;  3MSU A;  4YBO A;  1IXE A;  1CSH A;  4CSC A;  4XGH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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