1AOPA

Sulfite reductase structure at 1.6 angstrom resolution
Total Genus 161
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
161
sequence length
490
structure length
456
Chain Sequence
LLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILPVHQMLHSVGLDALNDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Sulfite reductase structure at 1.6 A: evolution and catalysis for reduction of inorganic anions.
pubmed rcsb
source organism Escherichia coli
molecule tags Oxidoreductase
molecule keywords SULFITE REDUCTASE HEMOPROTEIN
total genus 161
structure length 456
sequence length 490
ec nomenclature ec 1.8.1.2: Assimilatory sulfite reductase (NADPH).
pdb deposition date 1997-07-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01077 NIR_SIR Nitrite and sulphite reductase 4Fe-4S domain
A PF03460 NIR_SIR_ferr Nitrite/Sulfite reductase ferredoxin-like half domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.413.10 Alpha Beta 2-Layer Sandwich Sulfite Reductase Hemoprotein; domain 1 Sulfite Reductase Hemoprotein, domain 1 1aopA01
3.30.413.10 Alpha Beta 2-Layer Sandwich Sulfite Reductase Hemoprotein; domain 1 Sulfite Reductase Hemoprotein, domain 1 1aopA03
3.90.480.10 Alpha Beta Alpha-Beta Complex Sulfite Reductase Hemoprotein; domain 2 Sulfite Reductase Hemoprotein;Domain 2 1aopA02
1AOPA 4S3BA 3B0NA 3B0HA 3MM8A 3AOPA 3OR2B 3MMCA 3VM0A 3MMBA 3MM7A 4G38A 3MM9B 4S23A 2XSJA 3B0JA 3MM6B 8GEPA 3GEOA 3B0LA 3MMCB 4G9PA 3OR2A 1ZJ8A 4S3CA 3MMBB 4S39A 5GEPA 4S3EA 3MM6A 3VKQA 3MM5B 4GEPA 3VKPA 3MM9A 3MM7B 4S3AA 3MMAA 3VM1A 2XSJB 3VKTA 3VLZA 7GEPA 5AOPA 3B0GA 2V4JB 2GEPA 3NOYA 3MM8B 4S38A 4S3FA 4HTRA 3VKSA 3VLYA 3VKRA 4S3DA 3B0MA 2V4JA 2AOPA 2Y0FA 2AKJA 3MMAB 3OR1B 4G39A 3VLXA 4AOPA 6GEPA 3OR1A 3MM5A 1ZJ9A
chains in the Genus database with same CATH superfamily
1AOPA 4S3BA 3B0NA 3B0HA 3MM8A 3AOPA 3OR2B 3MMCA 3VM0A 3MMBA 3MM7A 4G38A 3MM9B 4S23A 2XSJA 3B0JA 3MM6B 8GEPA 3GEOA 3B0LA 3MMCB 4G9PA 3OR2A 1ZJ8A 4S3CA 3MMBB 4S39A 5GEPA 4S3EA 3MM6A 3VKQA 3MM5B 4GEPA 3VKPA 3MM9A 3MM7B 4S3AA 3MMAA 3VM1A 2XSJB 3VKTA 3VLZA 7GEPA 5AOPA 3B0GA 2V4JB 2GEPA 3NOYA 3MM8B 4S38A 4S3FA 4HTRA 3VKSA 3VLYA 3VKRA 4S3DA 3B0MA 2V4JA 2AOPA 2Y0FA 2AKJA 3MMAB 3OR1B 4G39A 3VLXA 4AOPA 6GEPA 3OR1A 3MM5A 1ZJ9A
chains in the Genus database with same CATH topology
1AOPA 4S3BA 3B0NA 3B0HA 3MM8A 3AOPA 3OR2B 3MMCA 3VM0A 3MMBA 3MM7A 4G38A 3MM9B 4S23A 2XSJA 3B0JA 3MM6B 8GEPA 3GEOA 3B0LA 3MMCB 4G9PA 3OR2A 1ZJ8A 4S3CA 3MMBB 4S39A 5GEPA 4S3EA 3MM6A 3VKQA 3MM5B 4GEPA 3VKPA 3MM9A 3MM7B 4S3AA 3MMAA 3VM1A 2XSJB 3VKTA 3VLZA 7GEPA 5AOPA 3B0GA 2V4JB 2GEPA 3NOYA 3MM8B 4S38A 4S3FA 4HTRA 3VKSA 3VLYA 3VKRA 4S3DA 3B0MA 2V4JA 2AOPA 2Y0FA 2AKJA 3MMAB 3OR1B 4G39A 3VLXA 4AOPA 6GEPA 3OR1A 3MM5A 1ZJ9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1AOP A;  4S3B A;  3B0N A;  3B0H A;  3MM8 A;  3AOP A;  3OR2 B;  3MMC A;  3VM0 A;  3MMB A;  3MM7 A;  4G38 A;  3MM9 B;  4S23 A;  2XSJ A;  3B0J A;  3MM6 B;  8GEP A;  3GEO A;  3B0L A;  3MMC B;  4G9P A;  3OR2 A;  1ZJ8 A;  4S3C A;  3MMB B;  4S39 A;  5GEP A;  4S3E A;  3MM6 A;  3VKQ A;  3MM5 B;  4GEP A;  3VKP A;  3MM9 A;  3MM7 B;  4S3A A;  3MMA A;  3VM1 A;  2XSJ B;  3VKT A;  3VLZ A;  7GEP A;  5AOP A;  3B0G A;  2V4J B;  2GEP A;  3NOY A;  3MM8 B;  4S38 A;  4S3F A;  4HTR A;  3VKS A;  3VLY A;  3VKR A;  4S3D A;  3B0M A;  2V4J A;  2AOP A;  2Y0F A;  2AKJ A;  3MMA B;  3OR1 B;  4G39 A;  3VLX A;  4AOP A;  6GEP A;  3OR1 A;  3MM5 A;  1ZJ9 A; 
#chains in the Genus database with same CATH topology
 1AOP A;  4S3B A;  3B0N A;  3B0H A;  3MM8 A;  3AOP A;  3OR2 B;  3MMC A;  3VM0 A;  3MMB A;  3MM7 A;  4G38 A;  3MM9 B;  4S23 A;  2XSJ A;  3B0J A;  3MM6 B;  8GEP A;  3GEO A;  3B0L A;  3MMC B;  4G9P A;  3OR2 A;  1ZJ8 A;  4S3C A;  3MMB B;  4S39 A;  5GEP A;  4S3E A;  3MM6 A;  3VKQ A;  3MM5 B;  4GEP A;  3VKP A;  3MM9 A;  3MM7 B;  4S3A A;  3MMA A;  3VM1 A;  2XSJ B;  3VKT A;  3VLZ A;  7GEP A;  5AOP A;  3B0G A;  2V4J B;  2GEP A;  3NOY A;  3MM8 B;  4S38 A;  4S3F A;  4HTR A;  3VKS A;  3VLY A;  3VKR A;  4S3D A;  3B0M A;  2V4J A;  2AOP A;  2Y0F A;  2AKJ A;  3MMA B;  3OR1 B;  4G39 A;  3VLX A;  4AOP A;  6GEP A;  3OR1 A;  3MM5 A;  1ZJ9 A; 
#chains in the Genus database with same CATH homology
 1AOP A;  4S3B A;  3B0N A;  3B0H A;  3MM8 A;  3AOP A;  3OR2 B;  3MMC A;  3VM0 A;  3MMB A;  3MM7 A;  4G38 A;  3MM9 B;  4S23 A;  2XSJ A;  3B0J A;  3MM6 B;  8GEP A;  3GEO A;  3B0L A;  3MMC B;  4G9P A;  3OR2 A;  1ZJ8 A;  4S3C A;  3MMB B;  4S39 A;  5GEP A;  4S3E A;  3MM6 A;  3VKQ A;  3MM5 B;  4GEP A;  3VKP A;  3MM9 A;  3MM7 B;  4S3A A;  3MMA A;  3VM1 A;  2XSJ B;  3VKT A;  3VLZ A;  7GEP A;  5AOP A;  3B0G A;  2V4J B;  2GEP A;  3NOY A;  3MM8 B;  4S38 A;  4S3F A;  4HTR A;  3VKS A;  3VLY A;  3VKR A;  4S3D A;  3B0M A;  2V4J A;  2AOP A;  2Y0F A;  2AKJ A;  3MMA B;  3OR1 B;  4G39 A;  3VLX A;  4AOP A;  6GEP A;  3OR1 A;  3MM5 A;  1ZJ9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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