1AW6A

Gal4 (cd), nmr, 24 structures
Total Genus 4
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
43
structure length
43
Chain Sequence
MKLLSSIEQACDICRLKKLKCSKEKPKCAKCLKNNWECRYSPK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Refined solution structure of the DNA-binding domain of GAL4 and use of 3J(113Cd,1H) in structure determination.
pubmed doi rcsb
molecule tags Transcription regulation
source organism Saccharomyces cerevisiae
molecule keywords GAL4 (CD)
total genus 4
structure length 43
sequence length 43
ec nomenclature
pdb deposition date 1997-10-10
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.240.10 Few Secondary Structures Irregular CD2-Gal4 Zn(2)-C6 fungal-type DNA-binding domain 1aw6A00
1QP9A 3ALCA 1HWTC 1PYIA 2ALCA 1AJYA 2HAPC 1F4SP 2EREA 1F5EP 1ZMEC 3COQA 1D66A 2ER8A 1PYCA 1AW6A 2ERGA
chains in the Genus database with same CATH superfamily
1QP9A 3ALCA 1HWTC 1PYIA 2ALCA 1AJYA 2HAPC 1F4SP 2EREA 1F5EP 1ZMEC 3COQA 1D66A 2ER8A 1PYCA 1AW6A 2ERGA
chains in the Genus database with same CATH topology
1QP9A 3ALCA 1HWTC 1PYIA 2ALCA 1AJYA 2HAPC 1F4SP 2EREA 1F5EP 1ZMEC 3COQA 1D66A 2ER8A 1PYCA 1AW6A 2ERGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QP9 A;  3ALC A;  1HWT C;  1PYI A;  2ALC A;  1AJY A;  2HAP C;  1F4S P;  2ERE A;  1F5E P;  1ZME C;  3COQ A;  1D66 A;  2ER8 A;  1PYC A;  1AW6 A;  2ERG A; 
#chains in the Genus database with same CATH topology
 1QP9 A;  3ALC A;  1HWT C;  1PYI A;  2ALC A;  1AJY A;  2HAP C;  1F4S P;  2ERE A;  1F5E P;  1ZME C;  3COQ A;  1D66 A;  2ER8 A;  1PYC A;  1AW6 A;  2ERG A; 
#chains in the Genus database with same CATH homology
 1QP9 A;  3ALC A;  1HWT C;  1PYI A;  2ALC A;  1AJY A;  2HAP C;  1F4S P;  2ERE A;  1F5E P;  1ZME C;  3COQ A;  1D66 A;  2ER8 A;  1PYC A;  1AW6 A;  2ERG A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...