1BC3A

Recombinant rat annexin v, triple mutant (t72k, s144k, s228k)
Total Genus 131
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
318
structure length
318
Chain Sequence
ALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELKGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGDTKGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETKGNLENLLLAVVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFATSLYSMIKGDTSGDYKKALLLLCGGEDD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Calcium-binding protein
molecule keywords ANNEXIN V
publication title Mutational and crystallographic analyses of interfacial residues in annexin V suggest direct interactions with phospholipid membrane components.
pubmed doi rcsb
source organism Rattus norvegicus
total genus 131
structure length 318
sequence length 318
ec nomenclature
pdb deposition date 1998-05-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1bc3A02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1bc3A04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1bc3A01
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 1bc3A03
1BC3A 1ANXA 4MDUA 2II2A 1AEIA 1YIIA 2ZOCA 2ZHJA 1N42A 1HVDA 1BCZA 1ALAA 2ZHIA 1I4AA 1AVRA 1HVFA 1N41A 2H0LA 1ANNA 1G5NA 1XJLA 2RANA 1W7BA 1DK5A 1AIIA 1AXNA 1N44A 1BCWA 2IE7A 1W3WA 4EVFA 3BRXA 2XO2A 1MCXA 1ANWA 1M9IA 4X9PA 1HM6A 1HAKA 4MDVA 1AOWA 1DM5A 1AVCA 1BC1A 2IE6A 1AVHA 1W45A 2Q4CA 2HYWA 4EVHA 1SAVA 1BO9A 1A8BA 2H0KA 1YJ0A 4HREA 1BC0A 1N00A 2HYUA 1HVEA 2IICA 2HYVA 1A8AA 1HVGA 1YCNA 2H0MA 1BCYA 2XO3A
chains in the Genus database with same CATH superfamily
4D7QA 1LKVX 2VXGA 3ANYA 1G5NA 1AXNA 1N44A 1BCWA 4L5MA 1Q8DA 3BRXA 1KU1A 1R8QE 3L8NA 3USWA 1QC7A 4JWLA 1AOWA 4FHRB 1AVCA 1W45A 2QEZA 1YGMA 3HJLA 1SAVA 1A8BA 1YJ0A 4HREA 1N00A 1HVEA 1A8AA 1R8ME 3AO0A 1HVGA 2H0MA 4KN4X 1W3WA 1BCYA 2ZHJA 1BC3A 4D7RA 1AEIA 1YIIA 2ZOCA 1HVDA 1BCZA 3ABSA 2K6XA 2R0DA 2ZHIA 1I4AA 1AVRA 1HVFA 2H0LA 1BC9A 4Q2SA 1XJLA 4JXHA 2R09A 1DK5A 1AIIA 1PBVA 2IE7A 4Z21A 1ANWA 1M9IA 1HAKA 1S9DE 2OY9A 3SWVA 4EVHA 1BC0A 2XO3A 4FQ0C 1R8SE 3LTLA 2II2A 1ANNA 4C0AA 2RANA 1W7BA 3TW5A 4EVFA 1MCXA 4A4PA 1HM6A 1BC1A 2IE6A 1XT0B 4C7PA 4KN7X 2HSNA 1ANXA 3SOHB 4MDUA 3ABQA 4KMUX 1ALAA 1N41A 1RE0B 1C1KA 2XO2A 4X9PA 4MDVA 4JMOA 1DM5A 1UPTB 1AVHA 3USYA 2Q4CA 3AJCA 1R4AE 2HYWA 1BO9A 2H0KA 2HYUA 2IICA 4JK1X 4OIYA 2HYVA 3ABRA 4JMIA 1YCNA 1XSZA 1N42A 3ABOA
chains in the Genus database with same CATH topology
1BC3A 1ANXA 4MDUA 2II2A 1AEIA 1YIIA 2ZOCA 2ZHJA 1N42A 1HVDA 1BCZA 1ALAA 2ZHIA 1I4AA 1AVRA 1HVFA 1N41A 2H0LA 1ANNA 1G5NA 1XJLA 2RANA 1W7BA 1DK5A 1AIIA 1AXNA 1N44A 1BCWA 2IE7A 1W3WA 4EVFA 3BRXA 2XO2A 1MCXA 1ANWA 1M9IA 4X9PA 1HM6A 1HAKA 4MDVA 1AOWA 1DM5A 1AVCA 1BC1A 2IE6A 1AVHA 1W45A 2Q4CA 2HYWA 4EVHA 1SAVA 1BO9A 1A8BA 2H0KA 1YJ0A 4HREA 1BC0A 1N00A 2HYUA 1HVEA 2IICA 2HYVA 1A8AA 1HVGA 1YCNA 2H0MA 1BCYA 2XO3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BC3 A;  1ANX A;  4MDU A;  2II2 A;  1AEI A;  1YII A;  2ZOC A;  2ZHJ A;  1N42 A;  1HVD A;  1BCZ A;  1ALA A;  2ZHI A;  1I4A A;  1AVR A;  1HVF A;  1N41 A;  2H0L A;  1ANN A;  1G5N A;  1XJL A;  2RAN A;  1W7B A;  1DK5 A;  1AII A;  1AXN A;  1N44 A;  1BCW A;  2IE7 A;  1W3W A;  4EVF A;  3BRX A;  2XO2 A;  1MCX A;  1ANW A;  1M9I A;  4X9P A;  1HM6 A;  1HAK A;  4MDV A;  1AOW A;  1DM5 A;  1AVC A;  1BC1 A;  2IE6 A;  1AVH A;  1W45 A;  2Q4C A;  2HYW A;  4EVH A;  1SAV A;  1BO9 A;  1A8B A;  2H0K A;  1YJ0 A;  4HRE A;  1BC0 A;  1N00 A;  2HYU A;  1HVE A;  2IIC A;  2HYV A;  1A8A A;  1HVG A;  1YCN A;  2H0M A;  1BCY A;  2XO3 A; 
#chains in the Genus database with same CATH topology
 4D7Q A;  1LKV X;  2VXG A;  3ANY A;  1G5N A;  1AXN A;  1N44 A;  1BCW A;  4L5M A;  1Q8D A;  3BRX A;  1KU1 A;  1R8Q E;  3L8N A;  3USW A;  1QC7 A;  4JWL A;  1AOW A;  4FHR B;  1AVC A;  1W45 A;  2QEZ A;  1YGM A;  3HJL A;  1SAV A;  1A8B A;  1YJ0 A;  4HRE A;  1N00 A;  1HVE A;  1A8A A;  1R8M E;  3AO0 A;  1HVG A;  2H0M A;  4KN4 X;  1W3W A;  1BCY A;  2ZHJ A;  1BC3 A;  4D7R A;  1AEI A;  1YII A;  2ZOC A;  1HVD A;  1BCZ A;  3ABS A;  2K6X A;  2R0D A;  2ZHI A;  1I4A A;  1AVR A;  1HVF A;  2H0L A;  1BC9 A;  4Q2S A;  1XJL A;  4JXH A;  2R09 A;  1DK5 A;  1AII A;  1PBV A;  2IE7 A;  4Z21 A;  1ANW A;  1M9I A;  1HAK A;  1S9D E;  2OY9 A;  3SWV A;  4EVH A;  1BC0 A;  2XO3 A;  4FQ0 C;  1R8S E;  3LTL A;  2II2 A;  1ANN A;  4C0A A;  2RAN A;  1W7B A;  3TW5 A;  4EVF A;  1MCX A;  4A4P A;  1HM6 A;  1BC1 A;  2IE6 A;  1XT0 B;  4C7P A;  4KN7 X;  2HSN A;  1ANX A;  3SOH B;  4MDU A;  3ABQ A;  4KMU X;  1ALA A;  1N41 A;  1RE0 B;  1C1K A;  2XO2 A;  4X9P A;  4MDV A;  4JMO A;  1DM5 A;  1UPT B;  1AVH A;  3USY A;  2Q4C A;  3AJC A;  1R4A E;  2HYW A;  1BO9 A;  2H0K A;  2HYU A;  2IIC A;  4JK1 X;  4OIY A;  2HYV A;  3ABR A;  4JMI A;  1YCN A;  1XSZ A;  1N42 A;  3ABO A; 
#chains in the Genus database with same CATH homology
 1BC3 A;  1ANX A;  4MDU A;  2II2 A;  1AEI A;  1YII A;  2ZOC A;  2ZHJ A;  1N42 A;  1HVD A;  1BCZ A;  1ALA A;  2ZHI A;  1I4A A;  1AVR A;  1HVF A;  1N41 A;  2H0L A;  1ANN A;  1G5N A;  1XJL A;  2RAN A;  1W7B A;  1DK5 A;  1AII A;  1AXN A;  1N44 A;  1BCW A;  2IE7 A;  1W3W A;  4EVF A;  3BRX A;  2XO2 A;  1MCX A;  1ANW A;  1M9I A;  4X9P A;  1HM6 A;  1HAK A;  4MDV A;  1AOW A;  1DM5 A;  1AVC A;  1BC1 A;  2IE6 A;  1AVH A;  1W45 A;  2Q4C A;  2HYW A;  4EVH A;  1SAV A;  1BO9 A;  1A8B A;  2H0K A;  1YJ0 A;  4HRE A;  1BC0 A;  1N00 A;  2HYU A;  1HVE A;  2IIC A;  2HYV A;  1A8A A;  1HVG A;  1YCN A;  2H0M A;  1BCY A;  2XO3 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...