1BOHA

Sulfur-substituted rhodanese (orthorhombic form)
Total Genus 97
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
97
sequence length
293
structure length
292
Chain Sequence
VHQVLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords RHODANESE
publication title NH2-terminal sequence truncation decreases the stability of bovine rhodanese, minimally perturbs its crystal structure, and enhances interaction with GroEL under native conditions.
pubmed doi rcsb
source organism Bos taurus
total genus 97
structure length 292
sequence length 293
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 1998-08-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1bohA02
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1bohA01
1OKGA 1YMDA 2HHGA 3NT6A 3O3WA 5LAMA 3ICTA 2EG4B 3ICRA 4WH7A 3OP3A 3MZZA 1RHSA 1T3KA 3TG1B 3I2VA 1ORBA 3IWHA 4OCGA 1YS0A 3AAYA 5LAOA 1YMKA 1E0CA 3HZUA 3TP9A 4JGTA 1YT8A 5HBLA 5HBPA 2MRMA 1BOHA 2ORAA 3G5JA 3FLHA 2J6PA 2JTRA 3FS5A 2MOLA 2DCQA 1VEEA 1H4KX 2EG4A 3UTNX 1QB0A 1CWTA 3R2UA 4F67A 3I3UA 3F4AA 3HIXA 3ICSA 3NTDA 2KL3A 2UZQA 3IPPA 5HPAA 2A2KA 2MOIA 1GMXA 2FSXA 1TQ1A 1YM9A 4WH9A 1URHA 1CWSA 5HBOA 3AAXA 2EG3A 2WLXA 3FOJA 2K0ZA 1GN0A 1CWRA 1YMLA 1DP2A 3ILMA 1WHBA 2WLRA 1RHDA 1C25A 3HWIA 1QXNA 3GK5A 3OLHA 3K9RA 3NHVA 2GWFA 3TG3A 1BOIA 5HBQA 1H4MX 1UARA 2IFDA 1HZMA 3IPOA 3P3AA 1WV9A 2JTSA 3NTAA 3D1PA 2JTQA 2IFVA 2VSWA 3FNJA 2OUCA
chains in the Genus database with same CATH superfamily
1OKGA 1YMDA 2HHGA 3NT6A 3O3WA 5LAMA 3ICTA 2EG4B 3ICRA 4WH7A 3OP3A 3MZZA 1RHSA 1T3KA 3TG1B 3I2VA 1ORBA 3IWHA 4OCGA 1YS0A 3AAYA 5LAOA 1YMKA 1E0CA 3HZUA 3TP9A 4JGTA 1YT8A 5HBLA 5HBPA 2MRMA 1BOHA 2ORAA 3G5JA 3FLHA 2J6PA 2JTRA 3FS5A 2MOLA 2DCQA 1VEEA 1H4KX 2EG4A 3UTNX 1QB0A 1CWTA 3R2UA 4F67A 3I3UA 3F4AA 3HIXA 3ICSA 3NTDA 2KL3A 2UZQA 3IPPA 5HPAA 2A2KA 2MOIA 1GMXA 2FSXA 2Q82A 1TQ1A 1YM9A 4WH9A 1URHA 1CWSA 5HBOA 3AAXA 2EG3A 2WLXA 3FOJA 2K0ZA 1GN0A 1CWRA 1YMLA 1DP2A 3ILMA 1WHBA 2WLRA 1RHDA 1C25A 3HWIA 1QXNA 3GK5A 3OLHA 3K9RA 3NHVA 2GWFA 3TG3A 1BOIA 5HBQA 1H4MX 1UARA 2IFDA 1HZMA 3IPOA 3P3AA 1WV9A 2JTSA 3NTAA 3D1PA 2JTQA 2IFVA 2VSWA 3FNJA 2OUCA
chains in the Genus database with same CATH topology
1OKGA 1YMDA 2HHGA 3NT6A 3O3WA 5LAMA 3ICTA 2EG4B 3ICRA 4WH7A 3OP3A 3MZZA 1RHSA 1T3KA 3TG1B 3I2VA 1ORBA 3IWHA 4OCGA 1YS0A 3AAYA 5LAOA 1YMKA 1E0CA 3HZUA 3TP9A 4JGTA 1YT8A 5HBLA 5HBPA 2MRMA 1BOHA 2ORAA 3G5JA 3FLHA 2J6PA 2JTRA 3FS5A 2MOLA 2DCQA 1VEEA 1H4KX 2EG4A 3UTNX 1QB0A 1CWTA 3R2UA 4F67A 3I3UA 3F4AA 3HIXA 3ICSA 3NTDA 2KL3A 2UZQA 3IPPA 5HPAA 2A2KA 2MOIA 1GMXA 2FSXA 1TQ1A 1YM9A 4WH9A 1URHA 1CWSA 5HBOA 3AAXA 2EG3A 2WLXA 3FOJA 2K0ZA 1GN0A 1CWRA 1YMLA 1DP2A 3ILMA 1WHBA 2WLRA 1RHDA 1C25A 3HWIA 1QXNA 3GK5A 3OLHA 3K9RA 3NHVA 2GWFA 3TG3A 1BOIA 5HBQA 1H4MX 1UARA 2IFDA 1HZMA 3IPOA 3P3AA 1WV9A 2JTSA 3NTAA 3D1PA 2JTQA 2IFVA 2VSWA 3FNJA 2OUCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OKG A;  1YMD A;  2HHG A;  3NT6 A;  3O3W A;  5LAM A;  3ICT A;  2EG4 B;  3ICR A;  4WH7 A;  3OP3 A;  3MZZ A;  1RHS A;  1T3K A;  3TG1 B;  3I2V A;  1ORB A;  3IWH A;  4OCG A;  1YS0 A;  3AAY A;  5LAO A;  1YMK A;  1E0C A;  3HZU A;  3TP9 A;  4JGT A;  1YT8 A;  5HBL A;  5HBP A;  2MRM A;  1BOH A;  2ORA A;  3G5J A;  3FLH A;  2J6P A;  2JTR A;  3FS5 A;  2MOL A;  2DCQ A;  1VEE A;  1H4K X;  2EG4 A;  3UTN X;  1QB0 A;  1CWT A;  3R2U A;  4F67 A;  3I3U A;  3F4A A;  3HIX A;  3ICS A;  3NTD A;  2KL3 A;  2UZQ A;  3IPP A;  5HPA A;  2A2K A;  2MOI A;  1GMX A;  2FSX A;  1TQ1 A;  1YM9 A;  4WH9 A;  1URH A;  1CWS A;  5HBO A;  3AAX A;  2EG3 A;  2WLX A;  3FOJ A;  2K0Z A;  1GN0 A;  1CWR A;  1YML A;  1DP2 A;  3ILM A;  1WHB A;  2WLR A;  1RHD A;  1C25 A;  3HWI A;  1QXN A;  3GK5 A;  3OLH A;  3K9R A;  3NHV A;  2GWF A;  3TG3 A;  1BOI A;  5HBQ A;  1H4M X;  1UAR A;  2IFD A;  1HZM A;  3IPO A;  3P3A A;  1WV9 A;  2JTS A;  3NTA A;  3D1P A;  2JTQ A;  2IFV A;  2VSW A;  3FNJ A;  2OUC A; 
#chains in the Genus database with same CATH topology
 1OKG A;  1YMD A;  2HHG A;  3NT6 A;  3O3W A;  5LAM A;  3ICT A;  2EG4 B;  3ICR A;  4WH7 A;  3OP3 A;  3MZZ A;  1RHS A;  1T3K A;  3TG1 B;  3I2V A;  1ORB A;  3IWH A;  4OCG A;  1YS0 A;  3AAY A;  5LAO A;  1YMK A;  1E0C A;  3HZU A;  3TP9 A;  4JGT A;  1YT8 A;  5HBL A;  5HBP A;  2MRM A;  1BOH A;  2ORA A;  3G5J A;  3FLH A;  2J6P A;  2JTR A;  3FS5 A;  2MOL A;  2DCQ A;  1VEE A;  1H4K X;  2EG4 A;  3UTN X;  1QB0 A;  1CWT A;  3R2U A;  4F67 A;  3I3U A;  3F4A A;  3HIX A;  3ICS A;  3NTD A;  2KL3 A;  2UZQ A;  3IPP A;  5HPA A;  2A2K A;  2MOI A;  1GMX A;  2FSX A;  2Q82 A;  1TQ1 A;  1YM9 A;  4WH9 A;  1URH A;  1CWS A;  5HBO A;  3AAX A;  2EG3 A;  2WLX A;  3FOJ A;  2K0Z A;  1GN0 A;  1CWR A;  1YML A;  1DP2 A;  3ILM A;  1WHB A;  2WLR A;  1RHD A;  1C25 A;  3HWI A;  1QXN A;  3GK5 A;  3OLH A;  3K9R A;  3NHV A;  2GWF A;  3TG3 A;  1BOI A;  5HBQ A;  1H4M X;  1UAR A;  2IFD A;  1HZM A;  3IPO A;  3P3A A;  1WV9 A;  2JTS A;  3NTA A;  3D1P A;  2JTQ A;  2IFV A;  2VSW A;  3FNJ A;  2OUC A; 
#chains in the Genus database with same CATH homology
 1OKG A;  1YMD A;  2HHG A;  3NT6 A;  3O3W A;  5LAM A;  3ICT A;  2EG4 B;  3ICR A;  4WH7 A;  3OP3 A;  3MZZ A;  1RHS A;  1T3K A;  3TG1 B;  3I2V A;  1ORB A;  3IWH A;  4OCG A;  1YS0 A;  3AAY A;  5LAO A;  1YMK A;  1E0C A;  3HZU A;  3TP9 A;  4JGT A;  1YT8 A;  5HBL A;  5HBP A;  2MRM A;  1BOH A;  2ORA A;  3G5J A;  3FLH A;  2J6P A;  2JTR A;  3FS5 A;  2MOL A;  2DCQ A;  1VEE A;  1H4K X;  2EG4 A;  3UTN X;  1QB0 A;  1CWT A;  3R2U A;  4F67 A;  3I3U A;  3F4A A;  3HIX A;  3ICS A;  3NTD A;  2KL3 A;  2UZQ A;  3IPP A;  5HPA A;  2A2K A;  2MOI A;  1GMX A;  2FSX A;  1TQ1 A;  1YM9 A;  4WH9 A;  1URH A;  1CWS A;  5HBO A;  3AAX A;  2EG3 A;  2WLX A;  3FOJ A;  2K0Z A;  1GN0 A;  1CWR A;  1YML A;  1DP2 A;  3ILM A;  1WHB A;  2WLR A;  1RHD A;  1C25 A;  3HWI A;  1QXN A;  3GK5 A;  3OLH A;  3K9R A;  3NHV A;  2GWF A;  3TG3 A;  1BOI A;  5HBQ A;  1H4M X;  1UAR A;  2IFD A;  1HZM A;  3IPO A;  3P3A A;  1WV9 A;  2JTS A;  3NTA A;  3D1P A;  2JTQ A;  2IFV A;  2VSW A;  3FNJ A;  2OUC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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