1BTBA

Three-dimensional solution structure and 13c assignments of barstar using nuclear magnetic resonance spectroscopy
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
89
structure length
89
Chain Sequence
KKAVINGEQIRSISDLHQTLKKELALPEYYGENLDALWDCLTGWVEYPLVLEWRQFEQSKQLTENGAESVLQVFREAKAEGCDITIILS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ribonuclease inhibitor
molecule keywords BARSTAR
publication title Three-dimensional solution structure and 13C assignments of barstar using nuclear magnetic resonance spectroscopy.
pubmed doi rcsb
source organism Bacillus amyloliquefaciens
total genus 22
structure length 89
sequence length 89
ec nomenclature
pdb deposition date 1994-05-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01337 Barstar Barstar (barnase inhibitor)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.370.10 Alpha Beta 2-Layer Sandwich Barnase; Chain D Barstar-like 1btbA00
1X1XD 1B27D 1AB7A 1X1UD 1A19A 1X1YD 2CX6A 1B3SD 1BGSE 1BTAA 1X1WD 2ZA4B 2HXXA 3DA7C 1B2SD 1AY7B 1BRSD 1B2UD 1BTBA 5F4CA
chains in the Genus database with same CATH superfamily
1X1XD 1B27D 1AB7A 1X1UD 2YK6A 2YK4A 1A19A 1X1YD 2CX6A 1B3SD 1BGSE 1BTAA 2YK5A 1X1WD 2ZA4B 2HXXA 3DA7C 1B2SD 1AY7B 1BRSD 1B2UD 2YK7A 1BTBA 5F4CA
chains in the Genus database with same CATH topology
1X1XD 1B27D 1AB7A 1X1UD 1A19A 1X1YD 2CX6A 1B3SD 1BGSE 1BTAA 1X1WD 2ZA4B 2HXXA 3DA7C 1B2SD 1AY7B 1BRSD 1B2UD 1BTBA 5F4CA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1X1X D;  1B27 D;  1AB7 A;  1X1U D;  1A19 A;  1X1Y D;  2CX6 A;  1B3S D;  1BGS E;  1BTA A;  1X1W D;  2ZA4 B;  2HXX A;  3DA7 C;  1B2S D;  1AY7 B;  1BRS D;  1B2U D;  1BTB A;  5F4C A; 
#chains in the Genus database with same CATH topology
 1X1X D;  1B27 D;  1AB7 A;  1X1U D;  2YK6 A;  2YK4 A;  1A19 A;  1X1Y D;  2CX6 A;  1B3S D;  1BGS E;  1BTA A;  2YK5 A;  1X1W D;  2ZA4 B;  2HXX A;  3DA7 C;  1B2S D;  1AY7 B;  1BRS D;  1B2U D;  2YK7 A;  1BTB A;  5F4C A; 
#chains in the Genus database with same CATH homology
 1X1X D;  1B27 D;  1AB7 A;  1X1U D;  1A19 A;  1X1Y D;  2CX6 A;  1B3S D;  1BGS E;  1BTA A;  1X1W D;  2ZA4 B;  2HXX A;  3DA7 C;  1B2S D;  1AY7 B;  1BRS D;  1B2U D;  1BTB A;  5F4C A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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