1C0GS

Crystal structure of 1:1 complex between gelsolin segment 1 and a dictyostelium/tetrahymena chimera actin (mutant 228: q228k/t229a/a230y/e360h)
Total Genus 39
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
127
structure length
127
Chain Sequence
MGSVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTCLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Contractile protein
molecule keywords PROTEIN (GELSOLIN SEGMENT 1)
publication title Structural basis for the higher Ca(2+)-activation of the regulated actin-activated myosin ATPase observed with Dictyostelium/Tetrahymena actin chimeras.
pubmed doi rcsb
source organism Homo sapiens
total genus 39
structure length 127
sequence length 127
ec nomenclature
pdb deposition date 1999-07-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
S PF00626 Gelsolin Gelsolin repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1c0gS00
1WNJA 5KYXB 1NM1G 1KCQA 2FH1A 2KVKA 3CJBG 3FFKA 2LXXA 5KYWA 1COFA 1NLVG 1NPHA 2XFAA 1WFSA 3A5OS 1Q8GA 1PD0A 4PKHB 4PKIG 2L72A 3EGDB 3TU5B 2MV2A 4BEX1 1AHQA 1SVYA 4PKGG 2NUPA 3CIPG 1EQYS 1H1VG 5FAEA 5KYWB 3EGDA 4CBXG 1T44G 1AK6A 1M4JA 3A5NS 1CNUA 2VILA 1RGIG 4KEEA 2MOTA 5KYYB 2FH3A 3Q2BA 3EH2A 5FAFA 1WM4A 1YAGG 2VACA 1M2VA 2HD7A 4KEFA 1T3XA 1T3YA 5KYYA 4JD2H 1PCXA 1P8XA 1C0GS 1ESVS 2NUPB 2W0IA 4LIZA 2NUTA 1UDMA 1V6FA 1TMWA 3FG6A 1VFQA 1C0FS 2D8BA 1YVNG 3L50A 1DEJS 4CBWG 1MDUA 5DD2A 3EFOA 2FF6G 2XF1A 1J72A 1SVRA 1M2VB 1P8ZG 1X67A 1CFYA 3EH1A 3A5LS 5KYUA 3EGXA 1M2OA 1VKKA 3CI5G 4S10C 1F7SA 2NUTB 1T2LA 1D4XG 1AK7A 3A5MS 5L6WC 2MP4A 1NMDG 2FH2A 2LLFA 3EFOB 1D0NA 3EG9B 5HVKD 5IVUA 2LJ8A 1JHWA 1SVQA 2I2QA 3FFNA 5KYXA 2QTVA 3CJCG 3EG9A 1TVJA 5KYUB 3EGXB 4KEDA 2FF3A 5A1MA 2VIKA 3FG7A 1HQZ1 3DAWB 4CBUG 1Q8XA 5KYNA 2FGHA 5HVKB 2FH4A 1QPVA 4Z94G 1PD1A
chains in the Genus database with same CATH superfamily
1WNJA 5KYXB 1NM1G 1KCQA 2FH1A 2KVKA 3CJBG 3FFKA 2LXXA 5KYWA 1COFA 1NLVG 1NPHA 2XFAA 1WFSA 3A5OS 1Q8GA 1PD0A 4PKHB 4PKIG 2L72A 3EGDB 3TU5B 2MV2A 4BEX1 1AHQA 1SVYA 4PKGG 2NUPA 3CIPG 1EQYS 1H1VG 5FAEA 5KYWB 3EGDA 4CBXG 1T44G 1AK6A 1M4JA 3A5NS 1CNUA 2VILA 1RGIG 4KEEA 2MOTA 5KYYB 2FH3A 3Q2BA 3EH2A 5FAFA 1WM4A 1YAGG 2VACA 1M2VA 2HD7A 4KEFA 1T3XA 1T3YA 5KYYA 4JD2H 1PCXA 1P8XA 1C0GS 1ESVS 2NUPB 2W0IA 4LIZA 2NUTA 1UDMA 1V6FA 1TMWA 3FG6A 1VFQA 1C0FS 2D8BA 1YVNG 3L50A 1DEJS 4CBWG 1MDUA 5DD2A 3EFOA 2FF6G 2XF1A 1J72A 1SVRA 1M2VB 1P8ZG 1X67A 1CFYA 3EH1A 3A5LS 5KYUA 3EGXA 1M2OA 1VKKA 3CI5G 4S10C 1F7SA 2NUTB 1T2LA 1D4XG 1AK7A 3A5MS 5L6WC 2MP4A 1NMDG 2FH2A 2LLFA 3EFOB 1D0NA 3EG9B 5HVKD 5IVUA 2LJ8A 1JHWA 1SVQA 2I2QA 3FFNA 5KYXA 3DA7A 2QTVA 3CJCG 3EG9A 1TVJA 5KYUB 3EGXB 4KEDA 2FF3A 5A1MA 2VIKA 3FG7A 1HQZ1 3DAWB 4CBUG 1Q8XA 5KYNA 2FGHA 5HVKB 2FH4A 1QPVA 4Z94G 1PD1A
chains in the Genus database with same CATH topology
1WNJA 5KYXB 1NM1G 1KCQA 2FH1A 2KVKA 3CJBG 3FFKA 2LXXA 5KYWA 1COFA 1NLVG 1NPHA 2XFAA 1WFSA 3A5OS 1Q8GA 1PD0A 4PKHB 4PKIG 2L72A 3EGDB 3TU5B 2MV2A 4BEX1 1AHQA 1SVYA 4PKGG 2NUPA 3CIPG 1EQYS 1H1VG 5FAEA 5KYWB 3EGDA 4CBXG 1T44G 1AK6A 1M4JA 3A5NS 1CNUA 2VILA 1RGIG 4KEEA 2MOTA 5KYYB 2FH3A 3Q2BA 3EH2A 5FAFA 1WM4A 1YAGG 2VACA 1M2VA 2HD7A 4KEFA 1T3XA 1T3YA 5KYYA 4JD2H 1PCXA 1P8XA 1C0GS 1ESVS 2NUPB 2W0IA 4LIZA 2NUTA 1UDMA 1V6FA 1TMWA 3FG6A 1VFQA 1C0FS 2D8BA 1YVNG 3L50A 1DEJS 4CBWG 1MDUA 5DD2A 3EFOA 2FF6G 2XF1A 1J72A 1SVRA 1M2VB 1P8ZG 1X67A 1CFYA 3EH1A 3A5LS 5KYUA 3EGXA 1M2OA 1VKKA 3CI5G 4S10C 1F7SA 2NUTB 1T2LA 1D4XG 1AK7A 3A5MS 5L6WC 2MP4A 1NMDG 2FH2A 2LLFA 3EFOB 1D0NA 3EG9B 5HVKD 5IVUA 2LJ8A 1JHWA 1SVQA 2I2QA 3FFNA 5KYXA 3DA7A 2QTVA 3CJCG 3EG9A 1TVJA 5KYUB 3EGXB 4KEDA 2FF3A 5A1MA 2VIKA 3FG7A 1HQZ1 3DAWB 4CBUG 1Q8XA 5KYNA 2FGHA 5HVKB 2FH4A 1QPVA 4Z94G 1PD1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WNJ A;  5KYX B;  1NM1 G;  1KCQ A;  2FH1 A;  2KVK A;  3CJB G;  3FFK A;  2LXX A;  5KYW A;  1COF A;  1NLV G;  1NPH A;  2XFA A;  1WFS A;  3A5O S;  1Q8G A;  1PD0 A;  4PKH B;  4PKI G;  2L72 A;  3EGD B;  3TU5 B;  2MV2 A;  4BEX 1;  1AHQ A;  1SVY A;  4PKG G;  2NUP A;  3CIP G;  1EQY S;  1H1V G;  5FAE A;  5KYW B;  3EGD A;  4CBX G;  1T44 G;  1AK6 A;  1M4J A;  3A5N S;  1CNU A;  2VIL A;  1RGI G;  4KEE A;  2MOT A;  5KYY B;  2FH3 A;  3Q2B A;  3EH2 A;  5FAF A;  1WM4 A;  1YAG G;  2VAC A;  1M2V A;  2HD7 A;  4KEF A;  1T3X A;  1T3Y A;  5KYY A;  4JD2 H;  1PCX A;  1P8X A;  1C0G S;  1ESV S;  2NUP B;  2W0I A;  4LIZ A;  2NUT A;  1UDM A;  1V6F A;  1TMW A;  3FG6 A;  1VFQ A;  1C0F S;  2D8B A;  1YVN G;  3L50 A;  1DEJ S;  4CBW G;  1MDU A;  5DD2 A;  3EFO A;  2FF6 G;  2XF1 A;  1J72 A;  1SVR A;  1M2V B;  1P8Z G;  1X67 A;  1CFY A;  3EH1 A;  3A5L S;  5KYU A;  3EGX A;  1M2O A;  1VKK A;  3CI5 G;  4S10 C;  1F7S A;  2NUT B;  1T2L A;  1D4X G;  1AK7 A;  3A5M S;  5L6W C;  2MP4 A;  1NMD G;  2FH2 A;  2LLF A;  3EFO B;  1D0N A;  3EG9 B;  5HVK D;  5IVU A;  2LJ8 A;  1JHW A;  1SVQ A;  2I2Q A;  3FFN A;  5KYX A;  2QTV A;  3CJC G;  3EG9 A;  1TVJ A;  5KYU B;  3EGX B;  4KED A;  2FF3 A;  5A1M A;  2VIK A;  3FG7 A;  1HQZ 1;  3DAW B;  4CBU G;  1Q8X A;  5KYN A;  2FGH A;  5HVK B;  2FH4 A;  1QPV A;  4Z94 G;  1PD1 A; 
#chains in the Genus database with same CATH topology
 1WNJ A;  5KYX B;  1NM1 G;  1KCQ A;  2FH1 A;  2KVK A;  3CJB G;  3FFK A;  2LXX A;  5KYW A;  1COF A;  1NLV G;  1NPH A;  2XFA A;  1WFS A;  3A5O S;  1Q8G A;  1PD0 A;  4PKH B;  4PKI G;  2L72 A;  3EGD B;  3TU5 B;  2MV2 A;  4BEX 1;  1AHQ A;  1SVY A;  4PKG G;  2NUP A;  3CIP G;  1EQY S;  1H1V G;  5FAE A;  5KYW B;  3EGD A;  4CBX G;  1T44 G;  1AK6 A;  1M4J A;  3A5N S;  1CNU A;  2VIL A;  1RGI G;  4KEE A;  2MOT A;  5KYY B;  2FH3 A;  3Q2B A;  3EH2 A;  5FAF A;  1WM4 A;  1YAG G;  2VAC A;  1M2V A;  2HD7 A;  4KEF A;  1T3X A;  1T3Y A;  5KYY A;  4JD2 H;  1PCX A;  1P8X A;  1C0G S;  1ESV S;  2NUP B;  2W0I A;  4LIZ A;  2NUT A;  1UDM A;  1V6F A;  1TMW A;  3FG6 A;  1VFQ A;  1C0F S;  2D8B A;  1YVN G;  3L50 A;  1DEJ S;  4CBW G;  1MDU A;  5DD2 A;  3EFO A;  2FF6 G;  2XF1 A;  1J72 A;  1SVR A;  1M2V B;  1P8Z G;  1X67 A;  1CFY A;  3EH1 A;  3A5L S;  5KYU A;  3EGX A;  1M2O A;  1VKK A;  3CI5 G;  4S10 C;  1F7S A;  2NUT B;  1T2L A;  1D4X G;  1AK7 A;  3A5M S;  5L6W C;  2MP4 A;  1NMD G;  2FH2 A;  2LLF A;  3EFO B;  1D0N A;  3EG9 B;  5HVK D;  5IVU A;  2LJ8 A;  1JHW A;  1SVQ A;  2I2Q A;  3FFN A;  5KYX A;  3DA7 A;  2QTV A;  3CJC G;  3EG9 A;  1TVJ A;  5KYU B;  3EGX B;  4KED A;  2FF3 A;  5A1M A;  2VIK A;  3FG7 A;  1HQZ 1;  3DAW B;  4CBU G;  1Q8X A;  5KYN A;  2FGH A;  5HVK B;  2FH4 A;  1QPV A;  4Z94 G;  1PD1 A; 
#chains in the Genus database with same CATH homology
 1WNJ A;  5KYX B;  1NM1 G;  1KCQ A;  2FH1 A;  2KVK A;  3CJB G;  3FFK A;  2LXX A;  5KYW A;  1COF A;  1NLV G;  1NPH A;  2XFA A;  1WFS A;  3A5O S;  1Q8G A;  1PD0 A;  4PKH B;  4PKI G;  2L72 A;  3EGD B;  3TU5 B;  2MV2 A;  4BEX 1;  1AHQ A;  1SVY A;  4PKG G;  2NUP A;  3CIP G;  1EQY S;  1H1V G;  5FAE A;  5KYW B;  3EGD A;  4CBX G;  1T44 G;  1AK6 A;  1M4J A;  3A5N S;  1CNU A;  2VIL A;  1RGI G;  4KEE A;  2MOT A;  5KYY B;  2FH3 A;  3Q2B A;  3EH2 A;  5FAF A;  1WM4 A;  1YAG G;  2VAC A;  1M2V A;  2HD7 A;  4KEF A;  1T3X A;  1T3Y A;  5KYY A;  4JD2 H;  1PCX A;  1P8X A;  1C0G S;  1ESV S;  2NUP B;  2W0I A;  4LIZ A;  2NUT A;  1UDM A;  1V6F A;  1TMW A;  3FG6 A;  1VFQ A;  1C0F S;  2D8B A;  1YVN G;  3L50 A;  1DEJ S;  4CBW G;  1MDU A;  5DD2 A;  3EFO A;  2FF6 G;  2XF1 A;  1J72 A;  1SVR A;  1M2V B;  1P8Z G;  1X67 A;  1CFY A;  3EH1 A;  3A5L S;  5KYU A;  3EGX A;  1M2O A;  1VKK A;  3CI5 G;  4S10 C;  1F7S A;  2NUT B;  1T2L A;  1D4X G;  1AK7 A;  3A5M S;  5L6W C;  2MP4 A;  1NMD G;  2FH2 A;  2LLF A;  3EFO B;  1D0N A;  3EG9 B;  5HVK D;  5IVU A;  2LJ8 A;  1JHW A;  1SVQ A;  2I2Q A;  3FFN A;  5KYX A;  3DA7 A;  2QTV A;  3CJC G;  3EG9 A;  1TVJ A;  5KYU B;  3EGX B;  4KED A;  2FF3 A;  5A1M A;  2VIK A;  3FG7 A;  1HQZ 1;  3DAW B;  4CBU G;  1Q8X A;  5KYN A;  2FGH A;  5HVK B;  2FH4 A;  1QPV A;  4Z94 G;  1PD1 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...