1C25A

Human cdc25a catalytic domain
Total Genus 55
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
55
sequence length
161
structure length
161
Chain Sequence
MLIGDFSKGYLFHTVAGKHQDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPPSYRPMHHEDFKE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords CDC25A
publication title Crystal structure of the catalytic domain of the human cell cycle control phosphatase, Cdc25A.
pubmed doi rcsb
source organism Homo sapiens
total genus 55
structure length 161
sequence length 161
ec nomenclature ec 3.1.3.48: Protein-tyrosine-phosphatase.
pdb deposition date 1998-04-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1c25A00
2A2KA 3OP3A 1YMKA 3NTAA 3FNJA 3I2VA 3UTNX 3NTDA 1YMLA 3GK5A 3ICRA 3IPOA 5HBQA 1WHBA 2JTQA 1QB0A 5HBOA 2FSXA 2IFVA 2HHGA 1DP2A 2OUCA 2WLRA 1VEEA 3HIXA 1ORBA 1RHDA 2ORAA 1QXNA 3D1PA 5HBPA 1YM9A 2MRMA 2JTRA 3R2UA 3TG1B 3AAXA 2UZQA 3FOJA 1C25A 1E0CA 1YMDA 3HWIA 2WLXA 2VSWA 3NT6A 1CWSA 2JTSA 4WH7A 3OLHA 3IWHA 3ILMA 3FLHA 4WH9A 1TQ1A 3O3WA 2KL3A 1OKGA 1GN0A 2GWFA 1RHSA 3NHVA 3HZUA 1YS0A 1BOIA 1UARA 2J6PA 3MZZA 1H4MX 1T3KA 1WV9A 3P3AA 3K9RA 1CWRA 3ICSA 4OCGA 1HZMA 5LAOA 3FS5A 3F4AA 3I3UA 5HPAA 3TG3A 1BOHA 1YT8A 1CWTA 2IFDA 4JGTA 2EG4A 2EG3A 3G5JA 3ICTA 3IPPA 2K0ZA 2DCQA 3TP9A 5HBLA 4F67A 2MOLA 2EG4B 1GMXA 5LAMA 2MOIA 1H4KX 1URHA 3AAYA
chains in the Genus database with same CATH superfamily
2A2KA 3OP3A 1YMKA 3NTAA 3FNJA 3I2VA 3UTNX 3NTDA 1YMLA 3GK5A 3ICRA 3IPOA 5HBQA 1WHBA 2JTQA 1QB0A 5HBOA 2FSXA 2IFVA 2HHGA 1DP2A 2OUCA 2WLRA 1VEEA 3HIXA 1ORBA 1RHDA 2ORAA 1QXNA 3D1PA 5HBPA 1YM9A 2MRMA 2JTRA 3R2UA 3TG1B 3AAXA 2UZQA 3FOJA 1C25A 1E0CA 1YMDA 3HWIA 2WLXA 2VSWA 3NT6A 1CWSA 2JTSA 4WH7A 3OLHA 3IWHA 3ILMA 3FLHA 4WH9A 1TQ1A 3O3WA 2KL3A 1OKGA 1GN0A 2GWFA 1RHSA 2Q82A 3NHVA 3HZUA 1YS0A 1BOIA 1UARA 2J6PA 3MZZA 1H4MX 1T3KA 1WV9A 3P3AA 3K9RA 1CWRA 3ICSA 4OCGA 1HZMA 5LAOA 3FS5A 3F4AA 3I3UA 5HPAA 3TG3A 1BOHA 1YT8A 1CWTA 2IFDA 4JGTA 2EG4A 2EG3A 3G5JA 3ICTA 3IPPA 2K0ZA 2DCQA 3TP9A 5HBLA 4F67A 2MOLA 2EG4B 1GMXA 5LAMA 2MOIA 1H4KX 1URHA 3AAYA
chains in the Genus database with same CATH topology
2A2KA 3OP3A 1YMKA 3NTAA 3FNJA 3I2VA 3UTNX 3NTDA 1YMLA 3GK5A 3ICRA 3IPOA 5HBQA 1WHBA 2JTQA 1QB0A 5HBOA 2FSXA 2IFVA 2HHGA 1DP2A 2OUCA 2WLRA 1VEEA 3HIXA 1ORBA 1RHDA 2ORAA 1QXNA 3D1PA 5HBPA 1YM9A 2MRMA 2JTRA 3R2UA 3TG1B 3AAXA 2UZQA 3FOJA 1C25A 1E0CA 1YMDA 3HWIA 2WLXA 2VSWA 3NT6A 1CWSA 2JTSA 4WH7A 3OLHA 3IWHA 3ILMA 3FLHA 4WH9A 1TQ1A 3O3WA 2KL3A 1OKGA 1GN0A 2GWFA 1RHSA 3NHVA 3HZUA 1YS0A 1BOIA 1UARA 2J6PA 3MZZA 1H4MX 1T3KA 1WV9A 3P3AA 3K9RA 1CWRA 3ICSA 4OCGA 1HZMA 5LAOA 3FS5A 3F4AA 3I3UA 5HPAA 3TG3A 1BOHA 1YT8A 1CWTA 2IFDA 4JGTA 2EG4A 2EG3A 3G5JA 3ICTA 3IPPA 2K0ZA 2DCQA 3TP9A 5HBLA 4F67A 2MOLA 2EG4B 1GMXA 5LAMA 2MOIA 1H4KX 1URHA 3AAYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A2K A;  3OP3 A;  1YMK A;  3NTA A;  3FNJ A;  3I2V A;  3UTN X;  3NTD A;  1YML A;  3GK5 A;  3ICR A;  3IPO A;  5HBQ A;  1WHB A;  2JTQ A;  1QB0 A;  5HBO A;  2FSX A;  2IFV A;  2HHG A;  1DP2 A;  2OUC A;  2WLR A;  1VEE A;  3HIX A;  1ORB A;  1RHD A;  2ORA A;  1QXN A;  3D1P A;  5HBP A;  1YM9 A;  2MRM A;  2JTR A;  3R2U A;  3TG1 B;  3AAX A;  2UZQ A;  3FOJ A;  1C25 A;  1E0C A;  1YMD A;  3HWI A;  2WLX A;  2VSW A;  3NT6 A;  1CWS A;  2JTS A;  4WH7 A;  3OLH A;  3IWH A;  3ILM A;  3FLH A;  4WH9 A;  1TQ1 A;  3O3W A;  2KL3 A;  1OKG A;  1GN0 A;  2GWF A;  1RHS A;  3NHV A;  3HZU A;  1YS0 A;  1BOI A;  1UAR A;  2J6P A;  3MZZ A;  1H4M X;  1T3K A;  1WV9 A;  3P3A A;  3K9R A;  1CWR A;  3ICS A;  4OCG A;  1HZM A;  5LAO A;  3FS5 A;  3F4A A;  3I3U A;  5HPA A;  3TG3 A;  1BOH A;  1YT8 A;  1CWT A;  2IFD A;  4JGT A;  2EG4 A;  2EG3 A;  3G5J A;  3ICT A;  3IPP A;  2K0Z A;  2DCQ A;  3TP9 A;  5HBL A;  4F67 A;  2MOL A;  2EG4 B;  1GMX A;  5LAM A;  2MOI A;  1H4K X;  1URH A;  3AAY A; 
#chains in the Genus database with same CATH topology
 2A2K A;  3OP3 A;  1YMK A;  3NTA A;  3FNJ A;  3I2V A;  3UTN X;  3NTD A;  1YML A;  3GK5 A;  3ICR A;  3IPO A;  5HBQ A;  1WHB A;  2JTQ A;  1QB0 A;  5HBO A;  2FSX A;  2IFV A;  2HHG A;  1DP2 A;  2OUC A;  2WLR A;  1VEE A;  3HIX A;  1ORB A;  1RHD A;  2ORA A;  1QXN A;  3D1P A;  5HBP A;  1YM9 A;  2MRM A;  2JTR A;  3R2U A;  3TG1 B;  3AAX A;  2UZQ A;  3FOJ A;  1C25 A;  1E0C A;  1YMD A;  3HWI A;  2WLX A;  2VSW A;  3NT6 A;  1CWS A;  2JTS A;  4WH7 A;  3OLH A;  3IWH A;  3ILM A;  3FLH A;  4WH9 A;  1TQ1 A;  3O3W A;  2KL3 A;  1OKG A;  1GN0 A;  2GWF A;  1RHS A;  2Q82 A;  3NHV A;  3HZU A;  1YS0 A;  1BOI A;  1UAR A;  2J6P A;  3MZZ A;  1H4M X;  1T3K A;  1WV9 A;  3P3A A;  3K9R A;  1CWR A;  3ICS A;  4OCG A;  1HZM A;  5LAO A;  3FS5 A;  3F4A A;  3I3U A;  5HPA A;  3TG3 A;  1BOH A;  1YT8 A;  1CWT A;  2IFD A;  4JGT A;  2EG4 A;  2EG3 A;  3G5J A;  3ICT A;  3IPP A;  2K0Z A;  2DCQ A;  3TP9 A;  5HBL A;  4F67 A;  2MOL A;  2EG4 B;  1GMX A;  5LAM A;  2MOI A;  1H4K X;  1URH A;  3AAY A; 
#chains in the Genus database with same CATH homology
 2A2K A;  3OP3 A;  1YMK A;  3NTA A;  3FNJ A;  3I2V A;  3UTN X;  3NTD A;  1YML A;  3GK5 A;  3ICR A;  3IPO A;  5HBQ A;  1WHB A;  2JTQ A;  1QB0 A;  5HBO A;  2FSX A;  2IFV A;  2HHG A;  1DP2 A;  2OUC A;  2WLR A;  1VEE A;  3HIX A;  1ORB A;  1RHD A;  2ORA A;  1QXN A;  3D1P A;  5HBP A;  1YM9 A;  2MRM A;  2JTR A;  3R2U A;  3TG1 B;  3AAX A;  2UZQ A;  3FOJ A;  1C25 A;  1E0C A;  1YMD A;  3HWI A;  2WLX A;  2VSW A;  3NT6 A;  1CWS A;  2JTS A;  4WH7 A;  3OLH A;  3IWH A;  3ILM A;  3FLH A;  4WH9 A;  1TQ1 A;  3O3W A;  2KL3 A;  1OKG A;  1GN0 A;  2GWF A;  1RHS A;  3NHV A;  3HZU A;  1YS0 A;  1BOI A;  1UAR A;  2J6P A;  3MZZ A;  1H4M X;  1T3K A;  1WV9 A;  3P3A A;  3K9R A;  1CWR A;  3ICS A;  4OCG A;  1HZM A;  5LAO A;  3FS5 A;  3F4A A;  3I3U A;  5HPA A;  3TG3 A;  1BOH A;  1YT8 A;  1CWT A;  2IFD A;  4JGT A;  2EG4 A;  2EG3 A;  3G5J A;  3ICT A;  3IPP A;  2K0Z A;  2DCQ A;  3TP9 A;  5HBL A;  4F67 A;  2MOL A;  2EG4 B;  1GMX A;  5LAM A;  2MOI A;  1H4K X;  1URH A;  3AAY A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...