1C2AA

Crystal structure of barley bbi
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
120
structure length
120
Chain Sequence
KRPWKCCDEAVCTRSIPPICTCMDEVFECPKTCKSCGPSMGDPSRRICQDQYVGDPGPICRPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSRSRPSRRVCIDSYFGPVPPRCT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords BOWMAN-BIRK TRYPSIN INHIBITOR
publication title Crystal structure of a 16 kDa double-headed Bowman-Birk trypsin inhibitor from barley seeds at 1.9 A resolution.
pubmed doi rcsb
total genus 15
structure length 120
sequence length 120
ec nomenclature
pdb deposition date 1999-07-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00228 Bowman-Birk_leg Bowman-Birk serine protease inhibitor family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.69.10 Mainly Beta Ribbon Cysteine Protease (Bromelain) Inhibitor, subunit H Cysteine Protease (Bromelain) Inhibitor, subunit H 1c2aA01
2.10.69.10 Mainly Beta Ribbon Cysteine Protease (Bromelain) Inhibitor, subunit H Cysteine Protease (Bromelain) Inhibitor, subunit H 1c2aA02
3RU4B 2BI6H 1K9BA 1H34A 2BBIA 2G81I 1BI6H 1BBIA 1C2AA 5J4QB 1D6RI 2FJ8A 2R33A 1PI2A 3MYWI 1TX6I 1PBIA 2AIHA 2ILNI 2QN5B 1MVZA 5J4SB
chains in the Genus database with same CATH superfamily
3RU4B 2BI6H 1K9BA 1H34A 2BBIA 2G81I 1BI6H 1BBIA 1C2AA 5J4QB 1D6RI 2FJ8A 2R33A 1PI2A 3MYWI 1TX6I 1PBIA 2AIHA 2ILNI 2QN5B 1MVZA 5J4SB
chains in the Genus database with same CATH topology
3RU4B 2BI6H 1K9BA 1H34A 2BBIA 2G81I 1BI6H 1BBIA 1C2AA 5J4QB 1D6RI 2FJ8A 2R33A 1PI2A 3MYWI 1TX6I 1PBIA 2AIHA 2ILNI 2QN5B 1MVZA 5J4SB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RU4 B;  2BI6 H;  1K9B A;  1H34 A;  2BBI A;  2G81 I;  1BI6 H;  1BBI A;  1C2A A;  5J4Q B;  1D6R I;  2FJ8 A;  2R33 A;  1PI2 A;  3MYW I;  1TX6 I;  1PBI A;  2AIH A;  2ILN I;  2QN5 B;  1MVZ A;  5J4S B; 
#chains in the Genus database with same CATH topology
 3RU4 B;  2BI6 H;  1K9B A;  1H34 A;  2BBI A;  2G81 I;  1BI6 H;  1BBI A;  1C2A A;  5J4Q B;  1D6R I;  2FJ8 A;  2R33 A;  1PI2 A;  3MYW I;  1TX6 I;  1PBI A;  2AIH A;  2ILN I;  2QN5 B;  1MVZ A;  5J4S B; 
#chains in the Genus database with same CATH homology
 3RU4 B;  2BI6 H;  1K9B A;  1H34 A;  2BBI A;  2G81 I;  1BI6 H;  1BBI A;  1C2A A;  5J4Q B;  1D6R I;  2FJ8 A;  2R33 A;  1PI2 A;  3MYW I;  1TX6 I;  1PBI A;  2AIH A;  2ILN I;  2QN5 B;  1MVZ A;  5J4S B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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