1CA0D

Bovine chymotrypsin complexed to appi
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
54
structure length
54
Chain Sequence
EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Complex (serine protease/inhibitor)
molecule keywords BOVINE CHYMOTRYPSIN
publication title Crystal structures of bovine chymotrypsin and trypsin complexed to the inhibitor domain of Alzheimer's amyloid beta-protein precursor (APPI) and basic pancreatic trypsin inhibitor (BPTI): engineering of inhibitors with altered specificities.
pubmed rcsb
source organism Bos taurus
total genus 9
structure length 54
sequence length 54
chains with identical sequence I
ec nomenclature
pdb deposition date 1997-01-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domain 1ca0D00
1YC0I 1BPIA 3TGJI 1BTIA 2LFLA 3BTMI 1P2QB 2FTMB 3AUIA 3OTJI 1LD6A 2KAII 3UIRC 3AUCA 1KTHA 4BD9B 3P92E 1BF0A 5C67C 3BTQI 4ISLB 3BTTI 5PTIA 2RA3C 1JV8A 3TGKI 1P2II 1B0CA 1P2KI 2TPII 3AUDA 4Y11I 1QLQA 1BZ5A 1CO7I 1YKTB 3P95E 1T8NB 3AUGA 1T8OB 3BTKI 1UUAA 5JB6A 4DG4C 1AALA 5JB4A 1BIKA 1TFXC 1D0DA 2R9PE 1FY8I 2KNTA 3BYBA 3FP8I 3GYMI 3OFWA 3BTGI 3AUEA 1YLDB 3WNYA 1F5RI 2LFKA 4NTXB 1DEMA 1BPTA 3UOUB 3LDJA 3FP6I 4Y0ZI 1Y62A 1TAWB 3BTFI 1TPAI 3LDIA 1OA55 1P2NB 1BRCI 4U32X 3L33E 1FANA 1BZXI 1LD5A 1T8MB 3AUHA 1JC6A 1CBWD 3FP7J 1G6XA 1TOCR 5JB7A 4Y0YI 1P2JI 5JB5A 3LDMA 1BHCA 3M7QB 2FI3I 1P2OB 2ZVXA 2M99A 1SHPA 3T62D 4PTIA 1KNTA 3AUBA 1BRBI 1CA0D 2HEXA 1KUNA 1BUNB 7PTIA 1MTND 4BQDA 1F7ZI 3D65I 2FI4I 4Y10I 1YLCB 2UUXA 1EAWB 1ZR0B 1NAGA 1DTXA 1K6UA 1T7CB 2ODYE 3BTDI 3U1JE 2JOTA 6PTIA 8PTIA 9PTIA 2W8XA 1KIGI 2ZJXA 2DDJA 4WXVC 2FI5I 4TPII 4DTGK 1EJMB 4WWYC 2UUYB 4U30W 1TAPA 1IRHA 3BTWI 2J6DA 2TGPI 4ISNB 2PTCI 2KCRA 3TGII 2M01A 1D0DB 1FAKI 3CI7A 4BNRI 4NTWB 1T8LB 2FTLI 4ISOB 1TCPA 2IJOI 1ZJDB 1JV9A 1BTHP 1DTKA 2CA7A 4NTYB 1PITA 3L3TE 1OA65 3BTHI 2DDIA 1DENA 1UUBA 1ADZA 1P2MB 3BTEI 3TPII 1AAPA
chains in the Genus database with same CATH superfamily
1YC0I 1BPIA 3TGJI 1BTIA 2LFLA 3BTMI 1P2QB 2FTMB 3AUIA 3OTJI 1LD6A 2KAII 3UIRC 3AUCA 1KTHA 4BD9B 3P92E 1BF0A 5C67C 3BTQI 4ISLB 3BTTI 5PTIA 2RA3C 1JV8A 3TGKI 1P2II 1B0CA 1P2KI 2TPII 3AUDA 4Y11I 1QLQA 1BZ5A 1CO7I 1YKTB 3P95E 1T8NB 3AUGA 1T8OB 3BTKI 1UUAA 5JB6A 4DG4C 1AALA 5JB4A 1BIKA 1TFXC 1D0DA 2R9PE 1FY8I 2KNTA 3BYBA 3FP8I 3GYMI 3OFWA 3BTGI 3AUEA 1YLDB 3WNYA 1F5RI 2LFKA 4NTXB 1DEMA 1BPTA 3UOUB 3LDJA 3FP6I 4Y0ZI 1Y62A 1TAWB 3BTFI 1TPAI 3LDIA 1OA55 1P2NB 1BRCI 4U32X 3L33E 1FANA 1BZXI 1LD5A 1T8MB 3AUHA 1JC6A 1CBWD 3FP7J 1G6XA 1TOCR 5JB7A 4Y0YI 1P2JI 5JB5A 3LDMA 1BHCA 3M7QB 2FI3I 1P2OB 2ZVXA 2M99A 1SHPA 3T62D 4PTIA 1KNTA 3AUBA 1BRBI 1CA0D 2HEXA 1KUNA 1BUNB 7PTIA 1MTND 4BQDA 1F7ZI 3D65I 2FI4I 4Y10I 1YLCB 2UUXA 1EAWB 1ZR0B 1NAGA 1DTXA 1K6UA 1T7CB 2ODYE 3BTDI 3U1JE 2JOTA 6PTIA 8PTIA 9PTIA 2W8XA 1KIGI 2ZJXA 2DDJA 4WXVC 2FI5I 4TPII 4DTGK 1EJMB 4WWYC 2UUYB 4U30W 1TAPA 1IRHA 3BTWI 2J6DA 2TGPI 4ISNB 2PTCI 2KCRA 3TGII 2M01A 1D0DB 1FAKI 3CI7A 4BNRI 4NTWB 1T8LB 2FTLI 4ISOB 1TCPA 2IJOI 1ZJDB 1JV9A 1BTHP 1DTKA 2CA7A 4NTYB 1PITA 3L3TE 1OA65 3BTHI 2DDIA 1DENA 1UUBA 1ADZA 1P2MB 3BTEI 3TPII 1AAPA
chains in the Genus database with same CATH topology
1YC0I 1BPIA 3TGJI 1BTIA 2LFLA 3BTMI 1P2QB 2FTMB 3AUIA 3OTJI 1LD6A 2KAII 3UIRC 3AUCA 1KTHA 4BD9B 3P92E 1BF0A 5C67C 3BTQI 4ISLB 3BTTI 5PTIA 2RA3C 1JV8A 3TGKI 1P2II 1B0CA 1P2KI 2TPII 3AUDA 4Y11I 1QLQA 1BZ5A 1CO7I 1YKTB 3P95E 1T8NB 3AUGA 1T8OB 3BTKI 1UUAA 5JB6A 4DG4C 1AALA 5JB4A 1BIKA 1TFXC 1D0DA 2R9PE 1FY8I 2KNTA 3BYBA 3FP8I 3GYMI 3OFWA 3BTGI 3AUEA 1YLDB 3WNYA 1F5RI 2LFKA 4NTXB 1DEMA 1BPTA 3UOUB 3LDJA 3FP6I 4Y0ZI 1Y62A 1TAWB 3BTFI 1TPAI 3LDIA 1OA55 1P2NB 1BRCI 4U32X 3L33E 1FANA 1BZXI 1LD5A 1T8MB 3AUHA 1JC6A 1CBWD 3FP7J 1G6XA 1TOCR 5JB7A 4Y0YI 1P2JI 5JB5A 3LDMA 1BHCA 3M7QB 2FI3I 1P2OB 2ZVXA 2M99A 1SHPA 3T62D 4PTIA 1KNTA 3AUBA 1BRBI 1CA0D 2HEXA 1KUNA 1BUNB 7PTIA 1MTND 4BQDA 1F7ZI 3D65I 2FI4I 4Y10I 1YLCB 2UUXA 1EAWB 1ZR0B 1NAGA 1DTXA 1K6UA 1T7CB 2ODYE 3BTDI 3U1JE 2JOTA 6PTIA 8PTIA 9PTIA 2W8XA 1KIGI 2ZJXA 2DDJA 4WXVC 2FI5I 4TPII 4DTGK 1EJMB 4WWYC 2UUYB 4U30W 1TAPA 1IRHA 3BTWI 2J6DA 2TGPI 4ISNB 2PTCI 2KCRA 3TGII 2M01A 1D0DB 1FAKI 3CI7A 4BNRI 4NTWB 1T8LB 2FTLI 4ISOB 1TCPA 2IJOI 1ZJDB 1JV9A 1BTHP 1DTKA 2CA7A 4NTYB 1PITA 3L3TE 1OA65 3BTHI 2DDIA 1DENA 1UUBA 1ADZA 1P2MB 3BTEI 3TPII 1AAPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YC0 I;  1BPI A;  3TGJ I;  1BTI A;  2LFL A;  3BTM I;  1P2Q B;  2FTM B;  3AUI A;  3OTJ I;  1LD6 A;  2KAI I;  3UIR C;  3AUC A;  1KTH A;  4BD9 B;  3P92 E;  1BF0 A;  5C67 C;  3BTQ I;  4ISL B;  3BTT I;  5PTI A;  2RA3 C;  1JV8 A;  3TGK I;  1P2I I;  1B0C A;  1P2K I;  2TPI I;  3AUD A;  4Y11 I;  1QLQ A;  1BZ5 A;  1CO7 I;  1YKT B;  3P95 E;  1T8N B;  3AUG A;  1T8O B;  3BTK I;  1UUA A;  5JB6 A;  4DG4 C;  1AAL A;  5JB4 A;  1BIK A;  1TFX C;  1D0D A;  2R9P E;  1FY8 I;  2KNT A;  3BYB A;  3FP8 I;  3GYM I;  3OFW A;  3BTG I;  3AUE A;  1YLD B;  3WNY A;  1F5R I;  2LFK A;  4NTX B;  1DEM A;  1BPT A;  3UOU B;  3LDJ A;  3FP6 I;  4Y0Z I;  1Y62 A;  1TAW B;  3BTF I;  1TPA I;  3LDI A;  1OA5 5;  1P2N B;  1BRC I;  4U32 X;  3L33 E;  1FAN A;  1BZX I;  1LD5 A;  1T8M B;  3AUH A;  1JC6 A;  1CBW D;  3FP7 J;  1G6X A;  1TOC R;  5JB7 A;  4Y0Y I;  1P2J I;  5JB5 A;  3LDM A;  1BHC A;  3M7Q B;  2FI3 I;  1P2O B;  2ZVX A;  2M99 A;  1SHP A;  3T62 D;  4PTI A;  1KNT A;  3AUB A;  1BRB I;  1CA0 D;  2HEX A;  1KUN A;  1BUN B;  7PTI A;  1MTN D;  4BQD A;  1F7Z I;  3D65 I;  2FI4 I;  4Y10 I;  1YLC B;  2UUX A;  1EAW B;  1ZR0 B;  1NAG A;  1DTX A;  1K6U A;  1T7C B;  2ODY E;  3BTD I;  3U1J E;  2JOT A;  6PTI A;  8PTI A;  9PTI A;  2W8X A;  1KIG I;  2ZJX A;  2DDJ A;  4WXV C;  2FI5 I;  4TPI I;  4DTG K;  1EJM B;  4WWY C;  2UUY B;  4U30 W;  1TAP A;  1IRH A;  3BTW I;  2J6D A;  2TGP I;  4ISN B;  2PTC I;  2KCR A;  3TGI I;  2M01 A;  1D0D B;  1FAK I;  3CI7 A;  4BNR I;  4NTW B;  1T8L B;  2FTL I;  4ISO B;  1TCP A;  2IJO I;  1ZJD B;  1JV9 A;  1BTH P;  1DTK A;  2CA7 A;  4NTY B;  1PIT A;  3L3T E;  1OA6 5;  3BTH I;  2DDI A;  1DEN A;  1UUB A;  1ADZ A;  1P2M B;  3BTE I;  3TPI I;  1AAP A; 
#chains in the Genus database with same CATH topology
 1YC0 I;  1BPI A;  3TGJ I;  1BTI A;  2LFL A;  3BTM I;  1P2Q B;  2FTM B;  3AUI A;  3OTJ I;  1LD6 A;  2KAI I;  3UIR C;  3AUC A;  1KTH A;  4BD9 B;  3P92 E;  1BF0 A;  5C67 C;  3BTQ I;  4ISL B;  3BTT I;  5PTI A;  2RA3 C;  1JV8 A;  3TGK I;  1P2I I;  1B0C A;  1P2K I;  2TPI I;  3AUD A;  4Y11 I;  1QLQ A;  1BZ5 A;  1CO7 I;  1YKT B;  3P95 E;  1T8N B;  3AUG A;  1T8O B;  3BTK I;  1UUA A;  5JB6 A;  4DG4 C;  1AAL A;  5JB4 A;  1BIK A;  1TFX C;  1D0D A;  2R9P E;  1FY8 I;  2KNT A;  3BYB A;  3FP8 I;  3GYM I;  3OFW A;  3BTG I;  3AUE A;  1YLD B;  3WNY A;  1F5R I;  2LFK A;  4NTX B;  1DEM A;  1BPT A;  3UOU B;  3LDJ A;  3FP6 I;  4Y0Z I;  1Y62 A;  1TAW B;  3BTF I;  1TPA I;  3LDI A;  1OA5 5;  1P2N B;  1BRC I;  4U32 X;  3L33 E;  1FAN A;  1BZX I;  1LD5 A;  1T8M B;  3AUH A;  1JC6 A;  1CBW D;  3FP7 J;  1G6X A;  1TOC R;  5JB7 A;  4Y0Y I;  1P2J I;  5JB5 A;  3LDM A;  1BHC A;  3M7Q B;  2FI3 I;  1P2O B;  2ZVX A;  2M99 A;  1SHP A;  3T62 D;  4PTI A;  1KNT A;  3AUB A;  1BRB I;  1CA0 D;  2HEX A;  1KUN A;  1BUN B;  7PTI A;  1MTN D;  4BQD A;  1F7Z I;  3D65 I;  2FI4 I;  4Y10 I;  1YLC B;  2UUX A;  1EAW B;  1ZR0 B;  1NAG A;  1DTX A;  1K6U A;  1T7C B;  2ODY E;  3BTD I;  3U1J E;  2JOT A;  6PTI A;  8PTI A;  9PTI A;  2W8X A;  1KIG I;  2ZJX A;  2DDJ A;  4WXV C;  2FI5 I;  4TPI I;  4DTG K;  1EJM B;  4WWY C;  2UUY B;  4U30 W;  1TAP A;  1IRH A;  3BTW I;  2J6D A;  2TGP I;  4ISN B;  2PTC I;  2KCR A;  3TGI I;  2M01 A;  1D0D B;  1FAK I;  3CI7 A;  4BNR I;  4NTW B;  1T8L B;  2FTL I;  4ISO B;  1TCP A;  2IJO I;  1ZJD B;  1JV9 A;  1BTH P;  1DTK A;  2CA7 A;  4NTY B;  1PIT A;  3L3T E;  1OA6 5;  3BTH I;  2DDI A;  1DEN A;  1UUB A;  1ADZ A;  1P2M B;  3BTE I;  3TPI I;  1AAP A; 
#chains in the Genus database with same CATH homology
 1YC0 I;  1BPI A;  3TGJ I;  1BTI A;  2LFL A;  3BTM I;  1P2Q B;  2FTM B;  3AUI A;  3OTJ I;  1LD6 A;  2KAI I;  3UIR C;  3AUC A;  1KTH A;  4BD9 B;  3P92 E;  1BF0 A;  5C67 C;  3BTQ I;  4ISL B;  3BTT I;  5PTI A;  2RA3 C;  1JV8 A;  3TGK I;  1P2I I;  1B0C A;  1P2K I;  2TPI I;  3AUD A;  4Y11 I;  1QLQ A;  1BZ5 A;  1CO7 I;  1YKT B;  3P95 E;  1T8N B;  3AUG A;  1T8O B;  3BTK I;  1UUA A;  5JB6 A;  4DG4 C;  1AAL A;  5JB4 A;  1BIK A;  1TFX C;  1D0D A;  2R9P E;  1FY8 I;  2KNT A;  3BYB A;  3FP8 I;  3GYM I;  3OFW A;  3BTG I;  3AUE A;  1YLD B;  3WNY A;  1F5R I;  2LFK A;  4NTX B;  1DEM A;  1BPT A;  3UOU B;  3LDJ A;  3FP6 I;  4Y0Z I;  1Y62 A;  1TAW B;  3BTF I;  1TPA I;  3LDI A;  1OA5 5;  1P2N B;  1BRC I;  4U32 X;  3L33 E;  1FAN A;  1BZX I;  1LD5 A;  1T8M B;  3AUH A;  1JC6 A;  1CBW D;  3FP7 J;  1G6X A;  1TOC R;  5JB7 A;  4Y0Y I;  1P2J I;  5JB5 A;  3LDM A;  1BHC A;  3M7Q B;  2FI3 I;  1P2O B;  2ZVX A;  2M99 A;  1SHP A;  3T62 D;  4PTI A;  1KNT A;  3AUB A;  1BRB I;  1CA0 D;  2HEX A;  1KUN A;  1BUN B;  7PTI A;  1MTN D;  4BQD A;  1F7Z I;  3D65 I;  2FI4 I;  4Y10 I;  1YLC B;  2UUX A;  1EAW B;  1ZR0 B;  1NAG A;  1DTX A;  1K6U A;  1T7C B;  2ODY E;  3BTD I;  3U1J E;  2JOT A;  6PTI A;  8PTI A;  9PTI A;  2W8X A;  1KIG I;  2ZJX A;  2DDJ A;  4WXV C;  2FI5 I;  4TPI I;  4DTG K;  1EJM B;  4WWY C;  2UUY B;  4U30 W;  1TAP A;  1IRH A;  3BTW I;  2J6D A;  2TGP I;  4ISN B;  2PTC I;  2KCR A;  3TGI I;  2M01 A;  1D0D B;  1FAK I;  3CI7 A;  4BNR I;  4NTW B;  1T8L B;  2FTL I;  4ISO B;  1TCP A;  2IJO I;  1ZJD B;  1JV9 A;  1BTH P;  1DTK A;  2CA7 A;  4NTY B;  1PIT A;  3L3T E;  1OA6 5;  3BTH I;  2DDI A;  1DEN A;  1UUB A;  1ADZ A;  1P2M B;  3BTE I;  3TPI I;  1AAP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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