1CHMA

Enzymatic mechanism of creatine amidinohydrolase as deduced from crystal structures
Total Genus 143
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
143
sequence length
401
structure length
401
Chain Sequence
QMPKTLRIRNGDKVRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLYCSFGRPYALVVTEDDVISISANIDGGQPWRRTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQYRTFGYGHSFGTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAGGYREHDILIVNENGAENITKFPYGPEKNIIR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Enzymatic mechanism of creatine amidinohydrolase as deduced from crystal structures.
pubmed doi rcsb
source organism Pseudomonas putida
molecule tags Creatinase
molecule keywords CREATINE AMIDINOHYDROLASE
total genus 143
structure length 401
sequence length 401
chains with identical sequence B
ec nomenclature ec 3.5.3.3: Creatinase.
pdb deposition date 1993-07-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 1chmA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 1chmA02
3RVAA 4S2RP 2HOWA 2IW2A 4IECA 4U75A 2GG2A 5CE6A 2BHBA 4PV4A 4ZWUA 1PV9A 1YW7A 4EGEA 3IG4A 2GU7A 2BH3A 4RZYA 3PKDA 5FCHA 3MX6A 4RGZ1 3S6BA 2EA2A 2GU4A 2GG0A 2BWTA 4FKCA 4B28A 1WBQA 2GTXA 3OVKA 4IF7A 2BN7A 1WL6A 2BWVA 3L7GA 2Q96A 5CNXA 1QXYA 2GGCA 1C27A 2Q95A 4IKUA 1WY2A 2B3LA 3RORA 2GG7A 1A16A 4PNCA 2V3YA 5E5BA 1XNZA 1KQ0A 4U69A 1R5HA 3PKAA 5CDEA 2Q93A 3IU7A 1WN1A 1XGSA 1WKMA 1WLRA 4U1BA 1C24A 2GU6A 2BWUA 1Y1NA 2B3KA 4FLKA 1C23A 4U76A 2BWWA 1KQ9A 4U6CA 2DFIA 1C21A 4IKSA 5CLSA 2P98A 3CB5A 4U6JA 3TAVA 4IDYA 4KM3A 1JAWA 3IU8A 2NQ6A 3Q6DA 1KP0A 4ZWOA 2MATA 4U6EA 4S00A 2EA4A 2P99A 3CB6A 1R58A 4IKRA 4A6WA 1WL9A 4U70A 3FMRA 1YJ3A 1W2MA 1CHMA 4S2TP 4ZWPA 2BWXA 4U6ZA 1M35A 2BHAA 2GA2A 1XGOA 1N51A 5JFRA 1XGNA 5E2CA 1XGMA 2ADUA 2GG8A 3IL0A 1O0XA 2GGBA 4FLIA 2BWYA 3BIQA 3TB5A 2EVCA 1B6AA 2B3HA 5CIKA 2BWSA 2GZ5A 1W7VA 3IU9A 2ZSGA 3QOCA 3PKBA 4FLLA 3O5VA 3D27A 4U71A 1BOAA 2OAZA 2V6CA 5CDVA 1YW8A 3PN9A 2BB7A 2GG3A 3OOOA 3FMQA 1MATA 3PKCA 4MATA 2G6PA 3MATA 3MR1A 5D6FA 5D6EA 1YVMA 3BITA 5CDLA 4U73A 4U6WA 4QR8A 2BHCA 4RZZA 2P9AA 3CTZA 2GU5A 4IKTA 4HXXA 2Q8KA 1QZYA 2GG5A 2Q92A 2Q94A 2BHDA 4FO7A 4FUKA 3BIPA 4R60A 1BN5A 5FCFA 3PKEA 1QXWA 1C22A 3FM3A 4FLJA 2EVMA 2V3XA 4A6VA 2GG9A 3PEBA 1YW9A 4Z7MA 1R5GA 2NQ7A 4JUQA 3L24A 4S01A 4ZNGA 3I7MA 4IPAA 4OOKA 2V3ZA 1QXZA 1B59A 2OKNA 5JHUA 5JI6A 2EVOA 4IU6A 4FO8A
chains in the Genus database with same CATH superfamily
3RVAA 4S2RP 2HOWA 2IW2A 4IECA 4U75A 2GG2A 5CE6A 2BHBA 4PV4A 4ZWUA 1PV9A 1YW7A 4EGEA 3IG4A 2GU7A 2BH3A 4RZYA 3PKDA 5FCHA 3MX6A 4RGZ1 3S6BA 2EA2A 2GU4A 2GG0A 2BWTA 4FKCA 4B28A 1WBQA 2GTXA 3OVKA 4IF7A 2BN7A 1WL6A 2BWVA 3L7GA 2Q96A 5CNXA 1QXYA 2GGCA 1C27A 2Q95A 4IKUA 1WY2A 2B3LA 3RORA 2GG7A 1A16A 4PNCA 2V3YA 5E5BA 1XNZA 1KQ0A 4U69A 1R5HA 3PKAA 5CDEA 2Q93A 3IU7A 1WN1A 1XGSA 1WKMA 1WLRA 4U1BA 1C24A 2GU6A 2BWUA 1Y1NA 2B3KA 4FLKA 1C23A 4U76A 2BWWA 1KQ9A 4U6CA 2DFIA 1C21A 4IKSA 5CLSA 2P98A 3CB5A 4U6JA 3TAVA 4IDYA 4KM3A 1JAWA 3IU8A 2NQ6A 3Q6DA 1KP0A 4ZWOA 2MATA 4U6EA 4S00A 2EA4A 2P99A 3CB6A 1R58A 4IKRA 4A6WA 1WL9A 4U70A 3FMRA 1YJ3A 1W2MA 1CHMA 4S2TP 4ZWPA 2BWXA 4U6ZA 1M35A 2BHAA 2GA2A 1XGOA 1N51A 5JFRA 1XGNA 5E2CA 1XGMA 2ADUA 2GG8A 3IL0A 1O0XA 2GGBA 4FLIA 2BWYA 3BIQA 3TB5A 2EVCA 1B6AA 2B3HA 5CIKA 2BWSA 2GZ5A 1W7VA 3IU9A 2ZSGA 3QOCA 3PKBA 4FLLA 3O5VA 3D27A 4U71A 1BOAA 2OAZA 2V6CA 5CDVA 1YW8A 3PN9A 2BB7A 2GG3A 3OOOA 3FMQA 1MATA 3PKCA 4MATA 2G6PA 3MATA 3MR1A 5D6FA 5D6EA 1YVMA 3BITA 5CDLA 4U73A 4U6WA 4QR8A 2BHCA 4RZZA 2P9AA 3CTZA 2GU5A 4IKTA 4HXXA 2Q8KA 1QZYA 2GG5A 2Q92A 2Q94A 2BHDA 4FO7A 4FUKA 3BIPA 4R60A 1BN5A 5FCFA 3PKEA 1QXWA 1C22A 3FM3A 4FLJA 2EVMA 2V3XA 4A6VA 2GG9A 3PEBA 1YW9A 4Z7MA 1R5GA 2NQ7A 4JUQA 3L24A 4S01A 4ZNGA 3I7MA 4IPAA 4OOKA 2V3ZA 1QXZA 1B59A 2OKNA 5JHUA 5JI6A 2EVOA 4IU6A 4FO8A
chains in the Genus database with same CATH topology
3RVAA 4S2RP 2HOWA 2IW2A 4IECA 4U75A 2GG2A 5CE6A 2BHBA 4PV4A 4ZWUA 1PV9A 1YW7A 4EGEA 3IG4A 2GU7A 2BH3A 4RZYA 3PKDA 5FCHA 3MX6A 4RGZ1 3S6BA 2EA2A 2GU4A 2GG0A 2BWTA 4FKCA 4B28A 1WBQA 2GTXA 3OVKA 4IF7A 2BN7A 1WL6A 2BWVA 3L7GA 2Q96A 5CNXA 1QXYA 2GGCA 1C27A 2Q95A 4IKUA 1WY2A 2B3LA 3RORA 2GG7A 1A16A 4PNCA 2V3YA 5E5BA 1XNZA 1KQ0A 4U69A 1R5HA 3PKAA 5CDEA 2Q93A 3IU7A 1WN1A 1XGSA 1WKMA 1WLRA 4U1BA 1C24A 2GU6A 2BWUA 1Y1NA 2B3KA 4FLKA 1C23A 4U76A 2BWWA 1KQ9A 4U6CA 2DFIA 1C21A 4IKSA 5CLSA 2P98A 3CB5A 4U6JA 3TAVA 4IDYA 4KM3A 1JAWA 3IU8A 2NQ6A 3Q6DA 1KP0A 4ZWOA 2MATA 4U6EA 4S00A 2EA4A 2P99A 3CB6A 1R58A 4IKRA 4A6WA 1WL9A 4U70A 3FMRA 1YJ3A 1W2MA 1CHMA 4S2TP 4ZWPA 2BWXA 4U6ZA 1M35A 2BHAA 2GA2A 1XGOA 1N51A 5JFRA 1XGNA 5E2CA 1XGMA 2ADUA 2GG8A 3IL0A 1O0XA 2GGBA 4FLIA 2BWYA 3BIQA 3TB5A 2EVCA 1B6AA 2B3HA 5CIKA 2BWSA 2GZ5A 1W7VA 3IU9A 2ZSGA 3QOCA 3PKBA 4FLLA 3O5VA 3D27A 4U71A 1BOAA 2OAZA 2V6CA 5CDVA 1YW8A 3PN9A 2BB7A 2GG3A 3OOOA 3FMQA 1MATA 3PKCA 4MATA 2G6PA 3MATA 3MR1A 5D6FA 5D6EA 1YVMA 3BITA 5CDLA 4U73A 4U6WA 4QR8A 2BHCA 4RZZA 2P9AA 3CTZA 2GU5A 4IKTA 4HXXA 2Q8KA 1QZYA 2GG5A 2Q92A 2Q94A 2BHDA 4FO7A 4FUKA 3BIPA 4R60A 1BN5A 5FCFA 3PKEA 1QXWA 1C22A 3FM3A 4FLJA 2EVMA 2V3XA 4A6VA 2GG9A 3PEBA 1YW9A 4Z7MA 1R5GA 2NQ7A 4JUQA 3L24A 4S01A 4ZNGA 3I7MA 4IPAA 4OOKA 2V3ZA 1QXZA 1B59A 2OKNA 5JHUA 5JI6A 2EVOA 4IU6A 4FO8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RVA A;  4S2R P;  2HOW A;  2IW2 A;  4IEC A;  4U75 A;  2GG2 A;  5CE6 A;  2BHB A;  4PV4 A;  4ZWU A;  1PV9 A;  1YW7 A;  4EGE A;  3IG4 A;  2GU7 A;  2BH3 A;  4RZY A;  3PKD A;  5FCH A;  3MX6 A;  4RGZ 1;  3S6B A;  2EA2 A;  2GU4 A;  2GG0 A;  2BWT A;  4FKC A;  4B28 A;  1WBQ A;  2GTX A;  3OVK A;  4IF7 A;  2BN7 A;  1WL6 A;  2BWV A;  3L7G A;  2Q96 A;  5CNX A;  1QXY A;  2GGC A;  1C27 A;  2Q95 A;  4IKU A;  1WY2 A;  2B3L A;  3ROR A;  2GG7 A;  1A16 A;  4PNC A;  2V3Y A;  5E5B A;  1XNZ A;  1KQ0 A;  4U69 A;  1R5H A;  3PKA A;  5CDE A;  2Q93 A;  3IU7 A;  1WN1 A;  1XGS A;  1WKM A;  1WLR A;  4U1B A;  1C24 A;  2GU6 A;  2BWU A;  1Y1N A;  2B3K A;  4FLK A;  1C23 A;  4U76 A;  2BWW A;  1KQ9 A;  4U6C A;  2DFI A;  1C21 A;  4IKS A;  5CLS A;  2P98 A;  3CB5 A;  4U6J A;  3TAV A;  4IDY A;  4KM3 A;  1JAW A;  3IU8 A;  2NQ6 A;  3Q6D A;  1KP0 A;  4ZWO A;  2MAT A;  4U6E A;  4S00 A;  2EA4 A;  2P99 A;  3CB6 A;  1R58 A;  4IKR A;  4A6W A;  1WL9 A;  4U70 A;  3FMR A;  1YJ3 A;  1W2M A;  1CHM A;  4S2T P;  4ZWP A;  2BWX A;  4U6Z A;  1M35 A;  2BHA A;  2GA2 A;  1XGO A;  1N51 A;  5JFR A;  1XGN A;  5E2C A;  1XGM A;  2ADU A;  2GG8 A;  3IL0 A;  1O0X A;  2GGB A;  4FLI A;  2BWY A;  3BIQ A;  3TB5 A;  2EVC A;  1B6A A;  2B3H A;  5CIK A;  2BWS A;  2GZ5 A;  1W7V A;  3IU9 A;  2ZSG A;  3QOC A;  3PKB A;  4FLL A;  3O5V A;  3D27 A;  4U71 A;  1BOA A;  2OAZ A;  2V6C A;  5CDV A;  1YW8 A;  3PN9 A;  2BB7 A;  2GG3 A;  3OOO A;  3FMQ A;  1MAT A;  3PKC A;  4MAT A;  2G6P A;  3MAT A;  3MR1 A;  5D6F A;  5D6E A;  1YVM A;  3BIT A;  5CDL A;  4U73 A;  4U6W A;  4QR8 A;  2BHC A;  4RZZ A;  2P9A A;  3CTZ A;  2GU5 A;  4IKT A;  4HXX A;  2Q8K A;  1QZY A;  2GG5 A;  2Q92 A;  2Q94 A;  2BHD A;  4FO7 A;  4FUK A;  3BIP A;  4R60 A;  1BN5 A;  5FCF A;  3PKE A;  1QXW A;  1C22 A;  3FM3 A;  4FLJ A;  2EVM A;  2V3X A;  4A6V A;  2GG9 A;  3PEB A;  1YW9 A;  4Z7M A;  1R5G A;  2NQ7 A;  4JUQ A;  3L24 A;  4S01 A;  4ZNG A;  3I7M A;  4IPA A;  4OOK A;  2V3Z A;  1QXZ A;  1B59 A;  2OKN A;  5JHU A;  5JI6 A;  2EVO A;  4IU6 A;  4FO8 A; 
#chains in the Genus database with same CATH topology
 3RVA A;  4S2R P;  2HOW A;  2IW2 A;  4IEC A;  4U75 A;  2GG2 A;  5CE6 A;  2BHB A;  4PV4 A;  4ZWU A;  1PV9 A;  1YW7 A;  4EGE A;  3IG4 A;  2GU7 A;  2BH3 A;  4RZY A;  3PKD A;  5FCH A;  3MX6 A;  4RGZ 1;  3S6B A;  2EA2 A;  2GU4 A;  2GG0 A;  2BWT A;  4FKC A;  4B28 A;  1WBQ A;  2GTX A;  3OVK A;  4IF7 A;  2BN7 A;  1WL6 A;  2BWV A;  3L7G A;  2Q96 A;  5CNX A;  1QXY A;  2GGC A;  1C27 A;  2Q95 A;  4IKU A;  1WY2 A;  2B3L A;  3ROR A;  2GG7 A;  1A16 A;  4PNC A;  2V3Y A;  5E5B A;  1XNZ A;  1KQ0 A;  4U69 A;  1R5H A;  3PKA A;  5CDE A;  2Q93 A;  3IU7 A;  1WN1 A;  1XGS A;  1WKM A;  1WLR A;  4U1B A;  1C24 A;  2GU6 A;  2BWU A;  1Y1N A;  2B3K A;  4FLK A;  1C23 A;  4U76 A;  2BWW A;  1KQ9 A;  4U6C A;  2DFI A;  1C21 A;  4IKS A;  5CLS A;  2P98 A;  3CB5 A;  4U6J A;  3TAV A;  4IDY A;  4KM3 A;  1JAW A;  3IU8 A;  2NQ6 A;  3Q6D A;  1KP0 A;  4ZWO A;  2MAT A;  4U6E A;  4S00 A;  2EA4 A;  2P99 A;  3CB6 A;  1R58 A;  4IKR A;  4A6W A;  1WL9 A;  4U70 A;  3FMR A;  1YJ3 A;  1W2M A;  1CHM A;  4S2T P;  4ZWP A;  2BWX A;  4U6Z A;  1M35 A;  2BHA A;  2GA2 A;  1XGO A;  1N51 A;  5JFR A;  1XGN A;  5E2C A;  1XGM A;  2ADU A;  2GG8 A;  3IL0 A;  1O0X A;  2GGB A;  4FLI A;  2BWY A;  3BIQ A;  3TB5 A;  2EVC A;  1B6A A;  2B3H A;  5CIK A;  2BWS A;  2GZ5 A;  1W7V A;  3IU9 A;  2ZSG A;  3QOC A;  3PKB A;  4FLL A;  3O5V A;  3D27 A;  4U71 A;  1BOA A;  2OAZ A;  2V6C A;  5CDV A;  1YW8 A;  3PN9 A;  2BB7 A;  2GG3 A;  3OOO A;  3FMQ A;  1MAT A;  3PKC A;  4MAT A;  2G6P A;  3MAT A;  3MR1 A;  5D6F A;  5D6E A;  1YVM A;  3BIT A;  5CDL A;  4U73 A;  4U6W A;  4QR8 A;  2BHC A;  4RZZ A;  2P9A A;  3CTZ A;  2GU5 A;  4IKT A;  4HXX A;  2Q8K A;  1QZY A;  2GG5 A;  2Q92 A;  2Q94 A;  2BHD A;  4FO7 A;  4FUK A;  3BIP A;  4R60 A;  1BN5 A;  5FCF A;  3PKE A;  1QXW A;  1C22 A;  3FM3 A;  4FLJ A;  2EVM A;  2V3X A;  4A6V A;  2GG9 A;  3PEB A;  1YW9 A;  4Z7M A;  1R5G A;  2NQ7 A;  4JUQ A;  3L24 A;  4S01 A;  4ZNG A;  3I7M A;  4IPA A;  4OOK A;  2V3Z A;  1QXZ A;  1B59 A;  2OKN A;  5JHU A;  5JI6 A;  2EVO A;  4IU6 A;  4FO8 A; 
#chains in the Genus database with same CATH homology
 3RVA A;  4S2R P;  2HOW A;  2IW2 A;  4IEC A;  4U75 A;  2GG2 A;  5CE6 A;  2BHB A;  4PV4 A;  4ZWU A;  1PV9 A;  1YW7 A;  4EGE A;  3IG4 A;  2GU7 A;  2BH3 A;  4RZY A;  3PKD A;  5FCH A;  3MX6 A;  4RGZ 1;  3S6B A;  2EA2 A;  2GU4 A;  2GG0 A;  2BWT A;  4FKC A;  4B28 A;  1WBQ A;  2GTX A;  3OVK A;  4IF7 A;  2BN7 A;  1WL6 A;  2BWV A;  3L7G A;  2Q96 A;  5CNX A;  1QXY A;  2GGC A;  1C27 A;  2Q95 A;  4IKU A;  1WY2 A;  2B3L A;  3ROR A;  2GG7 A;  1A16 A;  4PNC A;  2V3Y A;  5E5B A;  1XNZ A;  1KQ0 A;  4U69 A;  1R5H A;  3PKA A;  5CDE A;  2Q93 A;  3IU7 A;  1WN1 A;  1XGS A;  1WKM A;  1WLR A;  4U1B A;  1C24 A;  2GU6 A;  2BWU A;  1Y1N A;  2B3K A;  4FLK A;  1C23 A;  4U76 A;  2BWW A;  1KQ9 A;  4U6C A;  2DFI A;  1C21 A;  4IKS A;  5CLS A;  2P98 A;  3CB5 A;  4U6J A;  3TAV A;  4IDY A;  4KM3 A;  1JAW A;  3IU8 A;  2NQ6 A;  3Q6D A;  1KP0 A;  4ZWO A;  2MAT A;  4U6E A;  4S00 A;  2EA4 A;  2P99 A;  3CB6 A;  1R58 A;  4IKR A;  4A6W A;  1WL9 A;  4U70 A;  3FMR A;  1YJ3 A;  1W2M A;  1CHM A;  4S2T P;  4ZWP A;  2BWX A;  4U6Z A;  1M35 A;  2BHA A;  2GA2 A;  1XGO A;  1N51 A;  5JFR A;  1XGN A;  5E2C A;  1XGM A;  2ADU A;  2GG8 A;  3IL0 A;  1O0X A;  2GGB A;  4FLI A;  2BWY A;  3BIQ A;  3TB5 A;  2EVC A;  1B6A A;  2B3H A;  5CIK A;  2BWS A;  2GZ5 A;  1W7V A;  3IU9 A;  2ZSG A;  3QOC A;  3PKB A;  4FLL A;  3O5V A;  3D27 A;  4U71 A;  1BOA A;  2OAZ A;  2V6C A;  5CDV A;  1YW8 A;  3PN9 A;  2BB7 A;  2GG3 A;  3OOO A;  3FMQ A;  1MAT A;  3PKC A;  4MAT A;  2G6P A;  3MAT A;  3MR1 A;  5D6F A;  5D6E A;  1YVM A;  3BIT A;  5CDL A;  4U73 A;  4U6W A;  4QR8 A;  2BHC A;  4RZZ A;  2P9A A;  3CTZ A;  2GU5 A;  4IKT A;  4HXX A;  2Q8K A;  1QZY A;  2GG5 A;  2Q92 A;  2Q94 A;  2BHD A;  4FO7 A;  4FUK A;  3BIP A;  4R60 A;  1BN5 A;  5FCF A;  3PKE A;  1QXW A;  1C22 A;  3FM3 A;  4FLJ A;  2EVM A;  2V3X A;  4A6V A;  2GG9 A;  3PEB A;  1YW9 A;  4Z7M A;  1R5G A;  2NQ7 A;  4JUQ A;  3L24 A;  4S01 A;  4ZNG A;  3I7M A;  4IPA A;  4OOK A;  2V3Z A;  1QXZ A;  1B59 A;  2OKN A;  5JHU A;  5JI6 A;  2EVO A;  4IU6 A;  4FO8 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...