1CHMA

Enzymatic mechanism of creatine amidinohydrolase as deduced from crystal structures
Total Genus 143
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
143
sequence length
401
structure length
401
Chain Sequence
b'QMPKTLRIRNGDKVRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLYCSFGRPYALVVTEDDVISISANIDGGQPWRRTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAARYPDAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSGINTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQYRTFGYGHSFGTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGLPGAGGYREHDILIVNENGAENITKFPYGPEKNIIR'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Enzymatic mechanism of creatine amidinohydrolase as deduced from crystal structures.
pubmed doi rcsb
molecule keywords CREATINE AMIDINOHYDROLASE
source organism Pseudomonas putida
molecule tags Creatinase
total genus 143
structure length 401
sequence length 401
chains with identical sequence B
ec nomenclature ec 3.5.3.3: Creatinase.
pdb deposition date 1993-07-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 1chmA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 1chmA02
4ZWPA 2EVMA 4FLLA 5CDLA 5CDVA 2Q94A 2B3LA 1XGSA 4RGZ1 4IU6A 4FLJA 4ZNGA 2V6CA 4B28A 4PNCA 3PKBA 1WL9A 3MR1A 2B3HA 5CE6A 4U71A 4U76A 3D27A 3CTZA 5D6EA 2BWVA 3CB6A 1C22A 2EA2A 5CNXA 5JHUA 4S00A 2EVOA 1R5HA 1QXYA 4OOKA 1WKMA 2GA2A 3FMQA 4S01A 5FCFA 2GU4A 1KP0A 4ZWOA 1QZYA 2DFIA 4PV4A 4U69A 1BOAA 3FMRA 4Z7MA 2GU5A 2BWTA 1R5GA 2GG8A 2IW2A 2Q95A 2P9AA 4QR8A 2GZ5A 4IKUA 5CLSA 3PKAA 1PV9A 3IL0A 2BWUA 2NQ6A 1CHMA 3MX6A 4ZWUA 5JFRA 2OKNA 5FCHA 3BITA 1XGOA 1WLRA 2BH3A 1KQ0A 5E2CA 1MATA 1R58A 3CB5A 4RZZA 1WY2A 3O5VA 2P99A 4FKCA 2B3KA 3IU8A 4U6ZA 3FM3A 5JI6A 2BHCA 4U6EA 2BN7A 3IU9A 4HXXA 2V3ZA 4S2RP 4IDYA 2BWWA 1C24A 5D6FA 2BB7A 1C27A 4IPAA 4IECA 3MATA 5E5BA 3Q6DA 2BHBA 4R60A 3I7MA 2GG0A 2GGBA 1M35A 1BN5A 2ZSGA 3TAVA 4U1BA 1WL6A 2V3XA 2GG2A 3PEBA 2NQ7A 3RORA 1N51A 4IKTA 3BIPA 1QXZA 1YW9A 3OOOA 1KQ9A 4IKSA 2Q92A 3BIQA 1YW7A 4A6VA 3RVAA 2G6PA 4JUQA 2GG9A 1YJ3A 1W2MA 4U73A 2Q96A 4FO7A 3S6BA 1XGMA 3QOCA 2Q93A 4KM3A 4U70A 2BWYA 2EVCA 4IF7A 4EGEA 5CIKA 3L7GA 1WBQA 2HOWA 2GG7A 2P98A 4FUKA 2BWXA 3L24A 1C23A 2OAZA 3IG4A 1QXWA 2GU7A 4FLIA 1XGNA 2BHAA 1O0XA 2GGCA 2Q8KA 4A6WA 2GTXA 4FLKA 2MATA 3PKDA 4IKRA 1A16A 4U6CA 4U6JA 3OVKA 4RZYA 2V3YA 3PKCA 2EA4A 4U75A 1JAWA 2BWSA 1XNZA 4MATA 1B6AA 1C21A 4FO8A 4U6WA 1WN1A 3TB5A 4S2TP 2GU6A 3IU7A 1W7VA 2GG3A 5CDEA 1Y1NA 2GG5A 3PKEA 2ADUA 3PN9A 1B59A 2BHDA 1YW8A 1YVMA
chains in the Genus database with same CATH superfamily
4ZWPA 2EVMA 4FLLA 5CDLA 5CDVA 2Q94A 2B3LA 1XGSA 4RGZ1 4IU6A 4FLJA 4ZNGA 2V6CA 4B28A 4PNCA 3PKBA 1WL9A 3MR1A 2B3HA 5CE6A 4U71A 4U76A 3D27A 3CTZA 5D6EA 2BWVA 3CB6A 1C22A 2EA2A 5CNXA 5JHUA 4S00A 2EVOA 1R5HA 1QXYA 4OOKA 1WKMA 2GA2A 3FMQA 4S01A 5FCFA 2GU4A 1KP0A 4ZWOA 1QZYA 2DFIA 4PV4A 4U69A 1BOAA 3FMRA 4Z7MA 2GU5A 2BWTA 1R5GA 2GG8A 2IW2A 2Q95A 2P9AA 4QR8A 2GZ5A 4IKUA 5CLSA 3PKAA 1PV9A 3IL0A 2BWUA 2NQ6A 1CHMA 3MX6A 4ZWUA 5JFRA 2OKNA 5FCHA 3BITA 1XGOA 1WLRA 2BH3A 1KQ0A 5E2CA 1MATA 1R58A 3CB5A 4RZZA 1WY2A 3O5VA 2P99A 4FKCA 2B3KA 3IU8A 4U6ZA 3FM3A 5JI6A 2BHCA 4U6EA 2BN7A 3IU9A 4HXXA 2V3ZA 4S2RP 4IDYA 2BWWA 1C24A 5D6FA 2BB7A 1C27A 4IPAA 4IECA 3MATA 5E5BA 3Q6DA 2BHBA 4R60A 3I7MA 2GG0A 2GGBA 1M35A 1BN5A 2ZSGA 3TAVA 4U1BA 1WL6A 2V3XA 2GG2A 3PEBA 2NQ7A 3RORA 1N51A 4IKTA 3BIPA 1QXZA 1YW9A 3OOOA 1KQ9A 4IKSA 2Q92A 3BIQA 1YW7A 4A6VA 3RVAA 2G6PA 4JUQA 2GG9A 1YJ3A 1W2MA 4U73A 2Q96A 4FO7A 3S6BA 1XGMA 3QOCA 2Q93A 4KM3A 4U70A 2BWYA 2EVCA 4IF7A 4EGEA 5CIKA 3L7GA 1WBQA 2HOWA 2GG7A 2P98A 4FUKA 2BWXA 3L24A 1C23A 2OAZA 3IG4A 1QXWA 2GU7A 4FLIA 1XGNA 2BHAA 1O0XA 2GGCA 2Q8KA 4A6WA 2GTXA 4FLKA 2MATA 3PKDA 4IKRA 1A16A 4U6CA 4U6JA 3OVKA 4RZYA 2V3YA 3PKCA 2EA4A 4U75A 1JAWA 2BWSA 1XNZA 4MATA 1B6AA 1C21A 4FO8A 4U6WA 1WN1A 3TB5A 4S2TP 2GU6A 3IU7A 1W7VA 2GG3A 5CDEA 1Y1NA 2GG5A 3PKEA 2ADUA 3PN9A 1B59A 2BHDA 1YW8A 1YVMA
chains in the Genus database with same CATH topology
4ZWPA 2EVMA 4FLLA 5CDLA 5CDVA 2Q94A 2B3LA 1XGSA 4RGZ1 4IU6A 4FLJA 4ZNGA 2V6CA 4B28A 4PNCA 3PKBA 1WL9A 3MR1A 2B3HA 5CE6A 4U71A 4U76A 3D27A 3CTZA 5D6EA 2BWVA 3CB6A 1C22A 2EA2A 5CNXA 5JHUA 4S00A 2EVOA 1R5HA 1QXYA 4OOKA 1WKMA 2GA2A 3FMQA 4S01A 5FCFA 2GU4A 1KP0A 4ZWOA 1QZYA 2DFIA 4PV4A 4U69A 1BOAA 3FMRA 4Z7MA 2GU5A 2BWTA 1R5GA 2GG8A 2IW2A 2Q95A 2P9AA 4QR8A 2GZ5A 4IKUA 5CLSA 3PKAA 1PV9A 3IL0A 2BWUA 2NQ6A 1CHMA 3MX6A 4ZWUA 5JFRA 2OKNA 5FCHA 3BITA 1XGOA 1WLRA 2BH3A 1KQ0A 5E2CA 1MATA 1R58A 3CB5A 4RZZA 1WY2A 3O5VA 2P99A 4FKCA 2B3KA 3IU8A 4U6ZA 3FM3A 5JI6A 2BHCA 4U6EA 2BN7A 3IU9A 4HXXA 2V3ZA 4S2RP 4IDYA 2BWWA 1C24A 5D6FA 2BB7A 1C27A 4IPAA 4IECA 3MATA 5E5BA 3Q6DA 2BHBA 4R60A 3I7MA 2GG0A 2GGBA 1M35A 1BN5A 2ZSGA 3TAVA 4U1BA 1WL6A 2V3XA 2GG2A 3PEBA 2NQ7A 3RORA 1N51A 4IKTA 3BIPA 1QXZA 1YW9A 3OOOA 1KQ9A 4IKSA 2Q92A 3BIQA 1YW7A 4A6VA 3RVAA 2G6PA 4JUQA 2GG9A 1YJ3A 1W2MA 4U73A 2Q96A 4FO7A 3S6BA 1XGMA 3QOCA 2Q93A 4KM3A 4U70A 2BWYA 2EVCA 4IF7A 4EGEA 5CIKA 3L7GA 1WBQA 2HOWA 2GG7A 2P98A 4FUKA 2BWXA 3L24A 1C23A 2OAZA 3IG4A 1QXWA 2GU7A 4FLIA 1XGNA 2BHAA 1O0XA 2GGCA 2Q8KA 4A6WA 2GTXA 4FLKA 2MATA 3PKDA 4IKRA 1A16A 4U6CA 4U6JA 3OVKA 4RZYA 2V3YA 3PKCA 2EA4A 4U75A 1JAWA 2BWSA 1XNZA 4MATA 1B6AA 1C21A 4FO8A 4U6WA 1WN1A 3TB5A 4S2TP 2GU6A 3IU7A 1W7VA 2GG3A 5CDEA 1Y1NA 2GG5A 3PKEA 2ADUA 3PN9A 1B59A 2BHDA 1YW8A 1YVMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZWP A;  2EVM A;  4FLL A;  5CDL A;  5CDV A;  2Q94 A;  2B3L A;  1XGS A;  4RGZ 1;  4IU6 A;  4FLJ A;  4ZNG A;  2V6C A;  4B28 A;  4PNC A;  3PKB A;  1WL9 A;  3MR1 A;  2B3H A;  5CE6 A;  4U71 A;  4U76 A;  3D27 A;  3CTZ A;  5D6E A;  2BWV A;  3CB6 A;  1C22 A;  2EA2 A;  5CNX A;  5JHU A;  4S00 A;  2EVO A;  1R5H A;  1QXY A;  4OOK A;  1WKM A;  2GA2 A;  3FMQ A;  4S01 A;  5FCF A;  2GU4 A;  1KP0 A;  4ZWO A;  1QZY A;  2DFI A;  4PV4 A;  4U69 A;  1BOA A;  3FMR A;  4Z7M A;  2GU5 A;  2BWT A;  1R5G A;  2GG8 A;  2IW2 A;  2Q95 A;  2P9A A;  4QR8 A;  2GZ5 A;  4IKU A;  5CLS A;  3PKA A;  1PV9 A;  3IL0 A;  2BWU A;  2NQ6 A;  1CHM A;  3MX6 A;  4ZWU A;  5JFR A;  2OKN A;  5FCH A;  3BIT A;  1XGO A;  1WLR A;  2BH3 A;  1KQ0 A;  5E2C A;  1MAT A;  1R58 A;  3CB5 A;  4RZZ A;  1WY2 A;  3O5V A;  2P99 A;  4FKC A;  2B3K A;  3IU8 A;  4U6Z A;  3FM3 A;  5JI6 A;  2BHC A;  4U6E A;  2BN7 A;  3IU9 A;  4HXX A;  2V3Z A;  4S2R P;  4IDY A;  2BWW A;  1C24 A;  5D6F A;  2BB7 A;  1C27 A;  4IPA A;  4IEC A;  3MAT A;  5E5B A;  3Q6D A;  2BHB A;  4R60 A;  3I7M A;  2GG0 A;  2GGB A;  1M35 A;  1BN5 A;  2ZSG A;  3TAV A;  4U1B A;  1WL6 A;  2V3X A;  2GG2 A;  3PEB A;  2NQ7 A;  3ROR A;  1N51 A;  4IKT A;  3BIP A;  1QXZ A;  1YW9 A;  3OOO A;  1KQ9 A;  4IKS A;  2Q92 A;  3BIQ A;  1YW7 A;  4A6V A;  3RVA A;  2G6P A;  4JUQ A;  2GG9 A;  1YJ3 A;  1W2M A;  4U73 A;  2Q96 A;  4FO7 A;  3S6B A;  1XGM A;  3QOC A;  2Q93 A;  4KM3 A;  4U70 A;  2BWY A;  2EVC A;  4IF7 A;  4EGE A;  5CIK A;  3L7G A;  1WBQ A;  2HOW A;  2GG7 A;  2P98 A;  4FUK A;  2BWX A;  3L24 A;  1C23 A;  2OAZ A;  3IG4 A;  1QXW A;  2GU7 A;  4FLI A;  1XGN A;  2BHA A;  1O0X A;  2GGC A;  2Q8K A;  4A6W A;  2GTX A;  4FLK A;  2MAT A;  3PKD A;  4IKR A;  1A16 A;  4U6C A;  4U6J A;  3OVK A;  4RZY A;  2V3Y A;  3PKC A;  2EA4 A;  4U75 A;  1JAW A;  2BWS A;  1XNZ A;  4MAT A;  1B6A A;  1C21 A;  4FO8 A;  4U6W A;  1WN1 A;  3TB5 A;  4S2T P;  2GU6 A;  3IU7 A;  1W7V A;  2GG3 A;  5CDE A;  1Y1N A;  2GG5 A;  3PKE A;  2ADU A;  3PN9 A;  1B59 A;  2BHD A;  1YW8 A;  1YVM A; 
#chains in the Genus database with same CATH topology
 4ZWP A;  2EVM A;  4FLL A;  5CDL A;  5CDV A;  2Q94 A;  2B3L A;  1XGS A;  4RGZ 1;  4IU6 A;  4FLJ A;  4ZNG A;  2V6C A;  4B28 A;  4PNC A;  3PKB A;  1WL9 A;  3MR1 A;  2B3H A;  5CE6 A;  4U71 A;  4U76 A;  3D27 A;  3CTZ A;  5D6E A;  2BWV A;  3CB6 A;  1C22 A;  2EA2 A;  5CNX A;  5JHU A;  4S00 A;  2EVO A;  1R5H A;  1QXY A;  4OOK A;  1WKM A;  2GA2 A;  3FMQ A;  4S01 A;  5FCF A;  2GU4 A;  1KP0 A;  4ZWO A;  1QZY A;  2DFI A;  4PV4 A;  4U69 A;  1BOA A;  3FMR A;  4Z7M A;  2GU5 A;  2BWT A;  1R5G A;  2GG8 A;  2IW2 A;  2Q95 A;  2P9A A;  4QR8 A;  2GZ5 A;  4IKU A;  5CLS A;  3PKA A;  1PV9 A;  3IL0 A;  2BWU A;  2NQ6 A;  1CHM A;  3MX6 A;  4ZWU A;  5JFR A;  2OKN A;  5FCH A;  3BIT A;  1XGO A;  1WLR A;  2BH3 A;  1KQ0 A;  5E2C A;  1MAT A;  1R58 A;  3CB5 A;  4RZZ A;  1WY2 A;  3O5V A;  2P99 A;  4FKC A;  2B3K A;  3IU8 A;  4U6Z A;  3FM3 A;  5JI6 A;  2BHC A;  4U6E A;  2BN7 A;  3IU9 A;  4HXX A;  2V3Z A;  4S2R P;  4IDY A;  2BWW A;  1C24 A;  5D6F A;  2BB7 A;  1C27 A;  4IPA A;  4IEC A;  3MAT A;  5E5B A;  3Q6D A;  2BHB A;  4R60 A;  3I7M A;  2GG0 A;  2GGB A;  1M35 A;  1BN5 A;  2ZSG A;  3TAV A;  4U1B A;  1WL6 A;  2V3X A;  2GG2 A;  3PEB A;  2NQ7 A;  3ROR A;  1N51 A;  4IKT A;  3BIP A;  1QXZ A;  1YW9 A;  3OOO A;  1KQ9 A;  4IKS A;  2Q92 A;  3BIQ A;  1YW7 A;  4A6V A;  3RVA A;  2G6P A;  4JUQ A;  2GG9 A;  1YJ3 A;  1W2M A;  4U73 A;  2Q96 A;  4FO7 A;  3S6B A;  1XGM A;  3QOC A;  2Q93 A;  4KM3 A;  4U70 A;  2BWY A;  2EVC A;  4IF7 A;  4EGE A;  5CIK A;  3L7G A;  1WBQ A;  2HOW A;  2GG7 A;  2P98 A;  4FUK A;  2BWX A;  3L24 A;  1C23 A;  2OAZ A;  3IG4 A;  1QXW A;  2GU7 A;  4FLI A;  1XGN A;  2BHA A;  1O0X A;  2GGC A;  2Q8K A;  4A6W A;  2GTX A;  4FLK A;  2MAT A;  3PKD A;  4IKR A;  1A16 A;  4U6C A;  4U6J A;  3OVK A;  4RZY A;  2V3Y A;  3PKC A;  2EA4 A;  4U75 A;  1JAW A;  2BWS A;  1XNZ A;  4MAT A;  1B6A A;  1C21 A;  4FO8 A;  4U6W A;  1WN1 A;  3TB5 A;  4S2T P;  2GU6 A;  3IU7 A;  1W7V A;  2GG3 A;  5CDE A;  1Y1N A;  2GG5 A;  3PKE A;  2ADU A;  3PN9 A;  1B59 A;  2BHD A;  1YW8 A;  1YVM A; 
#chains in the Genus database with same CATH homology
 4ZWP A;  2EVM A;  4FLL A;  5CDL A;  5CDV A;  2Q94 A;  2B3L A;  1XGS A;  4RGZ 1;  4IU6 A;  4FLJ A;  4ZNG A;  2V6C A;  4B28 A;  4PNC A;  3PKB A;  1WL9 A;  3MR1 A;  2B3H A;  5CE6 A;  4U71 A;  4U76 A;  3D27 A;  3CTZ A;  5D6E A;  2BWV A;  3CB6 A;  1C22 A;  2EA2 A;  5CNX A;  5JHU A;  4S00 A;  2EVO A;  1R5H A;  1QXY A;  4OOK A;  1WKM A;  2GA2 A;  3FMQ A;  4S01 A;  5FCF A;  2GU4 A;  1KP0 A;  4ZWO A;  1QZY A;  2DFI A;  4PV4 A;  4U69 A;  1BOA A;  3FMR A;  4Z7M A;  2GU5 A;  2BWT A;  1R5G A;  2GG8 A;  2IW2 A;  2Q95 A;  2P9A A;  4QR8 A;  2GZ5 A;  4IKU A;  5CLS A;  3PKA A;  1PV9 A;  3IL0 A;  2BWU A;  2NQ6 A;  1CHM A;  3MX6 A;  4ZWU A;  5JFR A;  2OKN A;  5FCH A;  3BIT A;  1XGO A;  1WLR A;  2BH3 A;  1KQ0 A;  5E2C A;  1MAT A;  1R58 A;  3CB5 A;  4RZZ A;  1WY2 A;  3O5V A;  2P99 A;  4FKC A;  2B3K A;  3IU8 A;  4U6Z A;  3FM3 A;  5JI6 A;  2BHC A;  4U6E A;  2BN7 A;  3IU9 A;  4HXX A;  2V3Z A;  4S2R P;  4IDY A;  2BWW A;  1C24 A;  5D6F A;  2BB7 A;  1C27 A;  4IPA A;  4IEC A;  3MAT A;  5E5B A;  3Q6D A;  2BHB A;  4R60 A;  3I7M A;  2GG0 A;  2GGB A;  1M35 A;  1BN5 A;  2ZSG A;  3TAV A;  4U1B A;  1WL6 A;  2V3X A;  2GG2 A;  3PEB A;  2NQ7 A;  3ROR A;  1N51 A;  4IKT A;  3BIP A;  1QXZ A;  1YW9 A;  3OOO A;  1KQ9 A;  4IKS A;  2Q92 A;  3BIQ A;  1YW7 A;  4A6V A;  3RVA A;  2G6P A;  4JUQ A;  2GG9 A;  1YJ3 A;  1W2M A;  4U73 A;  2Q96 A;  4FO7 A;  3S6B A;  1XGM A;  3QOC A;  2Q93 A;  4KM3 A;  4U70 A;  2BWY A;  2EVC A;  4IF7 A;  4EGE A;  5CIK A;  3L7G A;  1WBQ A;  2HOW A;  2GG7 A;  2P98 A;  4FUK A;  2BWX A;  3L24 A;  1C23 A;  2OAZ A;  3IG4 A;  1QXW A;  2GU7 A;  4FLI A;  1XGN A;  2BHA A;  1O0X A;  2GGC A;  2Q8K A;  4A6W A;  2GTX A;  4FLK A;  2MAT A;  3PKD A;  4IKR A;  1A16 A;  4U6C A;  4U6J A;  3OVK A;  4RZY A;  2V3Y A;  3PKC A;  2EA4 A;  4U75 A;  1JAW A;  2BWS A;  1XNZ A;  4MAT A;  1B6A A;  1C21 A;  4FO8 A;  4U6W A;  1WN1 A;  3TB5 A;  4S2T P;  2GU6 A;  3IU7 A;  1W7V A;  2GG3 A;  5CDE A;  1Y1N A;  2GG5 A;  3PKE A;  2ADU A;  3PN9 A;  1B59 A;  2BHD A;  1YW8 A;  1YVM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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