1CSHA

A very short hydrogen bond provides only moderate stabilization of an enzyme: inhibitor complex of citrate synthase
Total Genus 164
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
164
sequence length
435
structure length
435
Chain Sequence
STNLKDVLASLIPKEQARIKTFRQQHGNTAVGQITVDMSYGGMRGMKGLIYETSVLDPDEGIRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLVTGQIPTPEQVSWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWEFVYEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDPQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTAGLEKLSAGG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase(oxo-acid)
molecule keywords CITRATE SYNTHASE
publication title A very short hydrogen bond provides only moderate stabilization of an enzyme-inhibitor complex of citrate synthase.
pubmed doi rcsb
source organism Gallus gallus
total genus 164
structure length 435
sequence length 435
ec nomenclature ec 2.3.3.1: Citrate (Si)-synthase.
pdb deposition date 1994-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00285 Citrate_synt Citrate synthase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.230.10 Mainly Alpha Orthogonal Bundle Cytochrome p450-Terp; domain 2 Cytochrome P450-Terp, domain 2 1cshA02
1.10.580.10 Mainly Alpha Orthogonal Bundle Citrate Synthase; domain 1 Citrate Synthase, domain 1 1cshA01
4JAFA 1IXEA 1CSHA 2CTSA 4XGHA 4G6BA 5CSCA 1IOMA 4CSCA 2R26A 1AMZA 1NXGA 1O7XA 1CSCA 5CSCB 6CSCA 2C6XA 1OWBA 2IBPA 4CTSA 4YBOA 4JADA 1AL6A 3O8JA 1CTSA 4TVMA 4E6YA 6CTSA 1CSSA 4JAEA 3MSUA 1AJ8A 3TQGA 4JAGA 3HWKA 1NXEA 2CSCA 1OWCA 1VGMA 1VGPA 1CSRA 2H12A 3CSCA 1CSIA 3ENJA 5CTSA 2IFCA 2R9EA 2P2WA 1A59A
chains in the Genus database with same CATH superfamily
4JAFA 1IXEA 1CSHA 2CTSA 4XGHA 4G6BA 5CSCA 1IOMA 4CSCA 2R26A 1AMZA 1NXGA 1O7XA 1CSCA 5CSCB 6CSCA 2C6XA 1OWBA 2IBPA 4CTSA 4YBOA 4JADA 1AL6A 3O8JA 1CTSA 4TVMA 4E6YA 6CTSA 1CSSA 4JAEA 3MSUA 1AJ8A 3TQGA 4JAGA 3HWKA 1NXEA 2CSCA 1OWCA 1VGMA 1VGPA 1CSRA 2H12A 3CSCA 1CSIA 3ENJA 5CTSA 2IFCA 2R9EA 2P2WA 1A59A
chains in the Genus database with same CATH topology
4JAFA 1IXEA 1CSHA 2CTSA 4XGHA 4G6BA 5CSCA 1IOMA 4CSCA 2R26A 1AMZA 1NXGA 1O7XA 1CSCA 5CSCB 6CSCA 2C6XA 1OWBA 2IBPA 4CTSA 4YBOA 4JADA 1AL6A 3O8JA 1CTSA 4TVMA 4E6YA 6CTSA 1CSSA 4JAEA 3MSUA 1AJ8A 3TQGA 4JAGA 3HWKA 1NXEA 2CSCA 1OWCA 1VGMA 1VGPA 1CSRA 2H12A 3CSCA 1CSIA 3ENJA 5CTSA 2IFCA 2R9EA 2P2WA 1A59A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JAF A;  1IXE A;  1CSH A;  2CTS A;  4XGH A;  4G6B A;  5CSC A;  1IOM A;  4CSC A;  2R26 A;  1AMZ A;  1NXG A;  1O7X A;  1CSC A;  5CSC B;  6CSC A;  2C6X A;  1OWB A;  2IBP A;  4CTS A;  4YBO A;  4JAD A;  1AL6 A;  3O8J A;  1CTS A;  4TVM A;  4E6Y A;  6CTS A;  1CSS A;  4JAE A;  3MSU A;  1AJ8 A;  3TQG A;  4JAG A;  3HWK A;  1NXE A;  2CSC A;  1OWC A;  1VGM A;  1VGP A;  1CSR A;  2H12 A;  3CSC A;  1CSI A;  3ENJ A;  5CTS A;  2IFC A;  2R9E A;  2P2W A;  1A59 A; 
#chains in the Genus database with same CATH topology
 4JAF A;  1IXE A;  1CSH A;  2CTS A;  4XGH A;  4G6B A;  5CSC A;  1IOM A;  4CSC A;  2R26 A;  1AMZ A;  1NXG A;  1O7X A;  1CSC A;  5CSC B;  6CSC A;  2C6X A;  1OWB A;  2IBP A;  4CTS A;  4YBO A;  4JAD A;  1AL6 A;  3O8J A;  1CTS A;  4TVM A;  4E6Y A;  6CTS A;  1CSS A;  4JAE A;  3MSU A;  1AJ8 A;  3TQG A;  4JAG A;  3HWK A;  1NXE A;  2CSC A;  1OWC A;  1VGM A;  1VGP A;  1CSR A;  2H12 A;  3CSC A;  1CSI A;  3ENJ A;  5CTS A;  2IFC A;  2R9E A;  2P2W A;  1A59 A; 
#chains in the Genus database with same CATH homology
 4JAF A;  1IXE A;  1CSH A;  2CTS A;  4XGH A;  4G6B A;  5CSC A;  1IOM A;  4CSC A;  2R26 A;  1AMZ A;  1NXG A;  1O7X A;  1CSC A;  5CSC B;  6CSC A;  2C6X A;  1OWB A;  2IBP A;  4CTS A;  4YBO A;  4JAD A;  1AL6 A;  3O8J A;  1CTS A;  4TVM A;  4E6Y A;  6CTS A;  1CSS A;  4JAE A;  3MSU A;  1AJ8 A;  3TQG A;  4JAG A;  3HWK A;  1NXE A;  2CSC A;  1OWC A;  1VGM A;  1VGP A;  1CSR A;  2H12 A;  3CSC A;  1CSI A;  3ENJ A;  5CTS A;  2IFC A;  2R9E A;  2P2W A;  1A59 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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