1DI6A

1.45 a crystal structure of the molybdenumm cofactor biosynthesis protein moga from escherichia coli
Total Genus 64
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
190
structure length
183
Chain Sequence
ATLRIGLVSISDRDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFASVPYCIQLLEGPYVETAPEVVAAFRPKSARR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Unknown function
molecule keywords MOLYBDENUM COFACTOR BIOSYNTHETIC ENZYME
publication title Crystal structure of the gephyrin-related molybdenum cofactor biosynthesis protein MogA from Escherichia coli.
pubmed doi rcsb
source organism Escherichia coli
total genus 64
structure length 183
sequence length 190
ec nomenclature ec 2.7.7.75: Molybdopterin adenylyltransferase.
pdb deposition date 1999-11-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 1di6A00
4TK1A 3K6AA 4PD0A 2QQ1A 2FTSA 5G2SA 4TK3A 3MCHA 4XCWA 2F7YA 3RFQA 4CT8A 2NRPA 1G8RA 1MKZA 4NWOA 5ERRA 4CT9A 1FC5A 5ERSA 5ERUA 1R2KA 3MCIA 1DI7A 2NQNA 4U91A 4UUXA 1JLJA 2F7WA 2NQUA 2IS8A 1XI8A 1UUYA 5ERTA 5G2RA 4UOCA 4CTAA 2NRSA 1DI6A 3TCRA 4CTAB 1Y5EA 1O8QA 1O8OA 3KBQA 2G2CA 1WU2A 2NQQA 3PZYA 5ERVA 2NROA 4LHBA 1UUXA 4U90A 1IHCA 1G8LA 2G4RA 2NQSA 3OI9A 2NQMA 2NQKA 4TWGA 2FU3A 2NQVA 4PD1A 1O8NA 2NQRA 4UUWA 1EAVA 1T3EA 1UZ5A 3MCJA 5ERQA 3IWTA 2PBQA 4TK4A
chains in the Genus database with same CATH superfamily
5G2SA 2NRPA 5ERSA 1DI7A 4U91A 4CTAA 2F7WA 5ERTA 5G2RA 2IS8A 4CTAB 1Y5EA 1YZYA 2G2CA 1WU2A 1IHCA 3DQQA 2NQMA 1T3EA 2PBQA 3K6AA 2QQ1A 3RFQA 4CT8A 1G8RA 1MKZA 4NWOA 1JLJA 1XI8A 1UUYA 2NRSA 1DI6A 3TCRA 1O8OA 3KBQA 5ERVA 1G8LA 2NQSA 4UUWA 1EAVA 4TK4A 5DMHA 4TK1A 4XCWA 2F7YA 5ERRA 5ERUA 1R2KA 2NQNA 4UUXA 2NQUA 2NQQA 4U90A 2NQKA 4TWGA 2FU3A 4PD1A 1O8NA 2NQRA 1UZ5A 3PZYA 3IWTA 4PD0A 2FTSA 4TK3A 3MCHA 4CT9A 1FC5A 3MCIA 4UOCA 1O8QA 2NROA 4LHBA 1UUXA 3OI9A 2G4RA 2NQVA 5ERQA 3MCJA
chains in the Genus database with same CATH topology
4TK1A 3K6AA 4PD0A 2QQ1A 2FTSA 5G2SA 4TK3A 3MCHA 4XCWA 2F7YA 3RFQA 4CT8A 2NRPA 1G8RA 1MKZA 4NWOA 5ERRA 4CT9A 1FC5A 5ERSA 5ERUA 1R2KA 3MCIA 1DI7A 2NQNA 4U91A 4UUXA 1JLJA 2F7WA 2NQUA 2IS8A 1XI8A 1UUYA 5ERTA 5G2RA 4UOCA 4CTAA 2NRSA 1DI6A 3TCRA 4CTAB 1Y5EA 1O8QA 1O8OA 3KBQA 2G2CA 1WU2A 2NQQA 3PZYA 5ERVA 2NROA 4LHBA 1UUXA 4U90A 1IHCA 1G8LA 2G4RA 2NQSA 3OI9A 2NQMA 2NQKA 4TWGA 2FU3A 2NQVA 4PD1A 1O8NA 2NQRA 4UUWA 1EAVA 1T3EA 1UZ5A 3MCJA 5ERQA 3IWTA 2PBQA 4TK4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4TK1 A;  3K6A A;  4PD0 A;  2QQ1 A;  2FTS A;  5G2S A;  4TK3 A;  3MCH A;  4XCW A;  2F7Y A;  3RFQ A;  4CT8 A;  2NRP A;  1G8R A;  1MKZ A;  4NWO A;  5ERR A;  4CT9 A;  1FC5 A;  5ERS A;  5ERU A;  1R2K A;  3MCI A;  1DI7 A;  2NQN A;  4U91 A;  4UUX A;  1JLJ A;  2F7W A;  2NQU A;  2IS8 A;  1XI8 A;  1UUY A;  5ERT A;  5G2R A;  4UOC A;  4CTA A;  2NRS A;  1DI6 A;  3TCR A;  4CTA B;  1Y5E A;  1O8Q A;  1O8O A;  3KBQ A;  2G2C A;  1WU2 A;  2NQQ A;  3PZY A;  5ERV A;  2NRO A;  4LHB A;  1UUX A;  4U90 A;  1IHC A;  1G8L A;  2G4R A;  2NQS A;  3OI9 A;  2NQM A;  2NQK A;  4TWG A;  2FU3 A;  2NQV A;  4PD1 A;  1O8N A;  2NQR A;  4UUW A;  1EAV A;  1T3E A;  1UZ5 A;  3MCJ A;  5ERQ A;  3IWT A;  2PBQ A;  4TK4 A; 
#chains in the Genus database with same CATH topology
 5G2S A;  2NRP A;  5ERS A;  1DI7 A;  4U91 A;  4CTA A;  2F7W A;  5ERT A;  5G2R A;  2IS8 A;  4CTA B;  1Y5E A;  1YZY A;  2G2C A;  1WU2 A;  1IHC A;  3DQQ A;  2NQM A;  1T3E A;  2PBQ A;  3K6A A;  2QQ1 A;  3RFQ A;  4CT8 A;  1G8R A;  1MKZ A;  4NWO A;  1JLJ A;  1XI8 A;  1UUY A;  2NRS A;  1DI6 A;  3TCR A;  1O8O A;  3KBQ A;  5ERV A;  1G8L A;  2NQS A;  4UUW A;  1EAV A;  4TK4 A;  5DMH A;  4TK1 A;  4XCW A;  2F7Y A;  5ERR A;  5ERU A;  1R2K A;  2NQN A;  4UUX A;  2NQU A;  2NQQ A;  4U90 A;  2NQK A;  4TWG A;  2FU3 A;  4PD1 A;  1O8N A;  2NQR A;  1UZ5 A;  3PZY A;  3IWT A;  4PD0 A;  2FTS A;  4TK3 A;  3MCH A;  4CT9 A;  1FC5 A;  3MCI A;  4UOC A;  1O8Q A;  2NRO A;  4LHB A;  1UUX A;  3OI9 A;  2G4R A;  2NQV A;  5ERQ A;  3MCJ A; 
#chains in the Genus database with same CATH homology
 4TK1 A;  3K6A A;  4PD0 A;  2QQ1 A;  2FTS A;  5G2S A;  4TK3 A;  3MCH A;  4XCW A;  2F7Y A;  3RFQ A;  4CT8 A;  2NRP A;  1G8R A;  1MKZ A;  4NWO A;  5ERR A;  4CT9 A;  1FC5 A;  5ERS A;  5ERU A;  1R2K A;  3MCI A;  1DI7 A;  2NQN A;  4U91 A;  4UUX A;  1JLJ A;  2F7W A;  2NQU A;  2IS8 A;  1XI8 A;  1UUY A;  5ERT A;  5G2R A;  4UOC A;  4CTA A;  2NRS A;  1DI6 A;  3TCR A;  4CTA B;  1Y5E A;  1O8Q A;  1O8O A;  3KBQ A;  2G2C A;  1WU2 A;  2NQQ A;  3PZY A;  5ERV A;  2NRO A;  4LHB A;  1UUX A;  4U90 A;  1IHC A;  1G8L A;  2G4R A;  2NQS A;  3OI9 A;  2NQM A;  2NQK A;  4TWG A;  2FU3 A;  2NQV A;  4PD1 A;  1O8N A;  2NQR A;  4UUW A;  1EAV A;  1T3E A;  1UZ5 A;  3MCJ A;  5ERQ A;  3IWT A;  2PBQ A;  4TK4 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...