1DNUC

Structural analyses of human myeloperoxidase-thiocyanate complex
Total Genus 143
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
143
sequence length
466
structure length
465
Chain Sequence
VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFVNCSTLPALNLASWREA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords MYELOPEROXIDASE
publication title Human myeloperoxidase: structure of a cyanide complex and its interaction with bromide and thiocyanate substrates at 1.9 A resolution.
pubmed doi rcsb
total genus 143
structure length 465
sequence length 466
chains with identical sequence D
ec nomenclature ec 1.11.2.2: Myeloperoxidase.
pdb deposition date 1999-12-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal type 1dnuC00
3NTBA 5B72A 5JVZA 3BXIA 5FDQA 3HS7A 3TGYA 1PGEA 4Z0LA 2QQTA 1PXXA 4Y55A 4KVLA 2QRBA 3NT1A 3N8WB 3R4XA 1CQEA 4HHSA 2NQXA 2OYUP 3NIUA 4FM5A 4RS0A 5F19A 3QH0A 3PY4A 3N8VA 1IGZA 1IGXA 3GCJA 1DDXA 3MDLA 4IG5A 3N8XA 1FE2A 3N8ZA 3R55A 4OTYA 3N8YB 5FIWC 4KVJA 3N8FA 3QF1A 3NAKA 1DIYA 5F1AA 1HT5A 3KRQA 1CX2A 5FF1A 4C1MC 3FAQA 3ERHA 4RUTA 4NJBA 2QPKA 4GN6A 1MYPC 3ZS1C 4RRYA 4OTJA 3OLTA 4KVKA 3GCLA 3NTGA 3PGHA 3HS5A 4E1GA 3F9PC 2O86A 3RKEA 2EFBA 4GM7A 4N7AA 1DNUC 4RRXA 5IKVA 3GC1A 2IPSA 4HHRA 3KK6A 1PRHA 3FNLA 3OGWA 3SXVA 5KIRA 3OLUA 5JW1A 3R5QA 3RR3A 3V6QA 4OEKA 5JVYA 4NT3A 1EBVA 3QL6A 4M11A 3LN0A 3NYHA 2Z5ZA 4RRWA 3HS6A 3KRKA 2GJMA 1D5LC 1PTHA 3N8WA 1DNWC 5GLSA 2OYEP 3GCKA 3S4FA 2PT3A 4PNXA 3ZS0C 4M10A 1U67A 1CVUA 5IKRA 1EQHA 2OJVA 3MQEA 4DL1C 3QMOA 1EQGA 4COXA 2EHAA 2E9EA 5HPWA 1D2VC 1HT8A 1MHLC 3UBAA 2IKCA 2AYLA 1D7WC 4QJQA 3ERIA 2PUMA 1CXPC 5IKQA 3N8YA 4LJJA 4KSZA 2R5LA 5GH0A 5IKTA 3Q9KA 3LN1A 6COXA 4RRZA 5COXA 4PH9A 4QYQA 3Q7DA 3I6NA 4MSFA 3TZIA 1Q4GA 4O1ZA 3R5OA
chains in the Genus database with same CATH superfamily
3NTBA 5B72A 5JVZA 3BXIA 5FDQA 3HS7A 3TGYA 1PGEA 4Z0LA 2QQTA 1PXXA 4Y55A 4KVLA 2QRBA 3NT1A 3N8WB 3R4XA 1CQEA 4HHSA 2NQXA 2OYUP 3NIUA 4FM5A 4RS0A 5F19A 3QH0A 3PY4A 3N8VA 1IGZA 1IGXA 3GCJA 1DDXA 3MDLA 4IG5A 3N8XA 1FE2A 3N8ZA 3R55A 4OTYA 3N8YB 5FIWC 4KVJA 3N8FA 3QF1A 3NAKA 1DIYA 5F1AA 1HT5A 3KRQA 1CX2A 5FF1A 4C1MC 3FAQA 3ERHA 4RUTA 4NJBA 2QPKA 4GN6A 1MYPC 3ZS1C 4RRYA 4OTJA 3OLTA 4KVKA 3GCLA 3NTGA 3PGHA 3HS5A 4E1GA 3F9PC 2O86A 3RKEA 2EFBA 4GM7A 4N7AA 1DNUC 4RRXA 5IKVA 3GC1A 2IPSA 4HHRA 3KK6A 1PRHA 3FNLA 3OGWA 3SXVA 5KIRA 3OLUA 5JW1A 3R5QA 3RR3A 3V6QA 4OEKA 5JVYA 4NT3A 1EBVA 3QL6A 4M11A 3LN0A 3NYHA 2Z5ZA 4RRWA 3HS6A 3KRKA 2GJMA 1D5LC 1PTHA 3N8WA 1DNWC 5GLSA 2OYEP 3GCKA 3S4FA 2PT3A 4PNXA 3ZS0C 4M10A 1U67A 1CVUA 5IKRA 1EQHA 2OJVA 3MQEA 4DL1C 3QMOA 1EQGA 4COXA 2EHAA 2E9EA 5HPWA 1D2VC 1HT8A 1MHLC 3UBAA 2IKCA 2AYLA 1D7WC 4QJQA 3ERIA 2PUMA 1CXPC 5IKQA 3N8YA 4LJJA 4KSZA 2R5LA 5GH0A 5IKTA 3Q9KA 3LN1A 6COXA 4RRZA 5COXA 4PH9A 4QYQA 3Q7DA 3I6NA 4MSFA 3TZIA 1Q4GA 4O1ZA 3R5OA
chains in the Genus database with same CATH topology
3NTBA 5B72A 5JVZA 3BXIA 5FDQA 3HS7A 3TGYA 1PGEA 4Z0LA 2QQTA 1PXXA 4Y55A 4KVLA 2QRBA 3NT1A 3N8WB 3R4XA 1CQEA 4HHSA 2NQXA 2OYUP 3NIUA 4FM5A 4RS0A 5F19A 3QH0A 3PY4A 3N8VA 1IGZA 1IGXA 3GCJA 1DDXA 3MDLA 4IG5A 3N8XA 1FE2A 3N8ZA 3R55A 4OTYA 3N8YB 5FIWC 4KVJA 3N8FA 3QF1A 3NAKA 1DIYA 5F1AA 1HT5A 3KRQA 1CX2A 5FF1A 4C1MC 3FAQA 3ERHA 4RUTA 4NJBA 2QPKA 4GN6A 1MYPC 3ZS1C 4RRYA 4OTJA 3OLTA 4KVKA 3GCLA 3NTGA 3PGHA 3HS5A 4E1GA 3F9PC 2O86A 3RKEA 2EFBA 4GM7A 4N7AA 1DNUC 4RRXA 5IKVA 3GC1A 2IPSA 4HHRA 3KK6A 1PRHA 3FNLA 3OGWA 3SXVA 5KIRA 3OLUA 5JW1A 3R5QA 3RR3A 3V6QA 4OEKA 5JVYA 4NT3A 1EBVA 3QL6A 4M11A 3LN0A 3NYHA 2Z5ZA 4RRWA 3HS6A 3KRKA 2GJMA 1D5LC 1PTHA 3N8WA 1DNWC 5GLSA 2OYEP 3GCKA 3S4FA 2PT3A 4PNXA 3ZS0C 4M10A 1U67A 1CVUA 5IKRA 1EQHA 2OJVA 3MQEA 4DL1C 3QMOA 1EQGA 4COXA 2EHAA 2E9EA 5HPWA 1D2VC 1HT8A 1MHLC 3UBAA 2IKCA 2AYLA 1D7WC 4QJQA 3ERIA 2PUMA 1CXPC 5IKQA 3N8YA 4LJJA 4KSZA 2R5LA 5GH0A 5IKTA 3Q9KA 3LN1A 6COXA 4RRZA 5COXA 4PH9A 4QYQA 3Q7DA 3I6NA 4MSFA 3TZIA 1Q4GA 4O1ZA 3R5OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3NTB A;  5B72 A;  5JVZ A;  3BXI A;  5FDQ A;  3HS7 A;  3TGY A;  1PGE A;  4Z0L A;  2QQT A;  1PXX A;  4Y55 A;  4KVL A;  2QRB A;  3NT1 A;  3N8W B;  3R4X A;  1CQE A;  4HHS A;  2NQX A;  2OYU P;  3NIU A;  4FM5 A;  4RS0 A;  5F19 A;  3QH0 A;  3PY4 A;  3N8V A;  1IGZ A;  1IGX A;  3GCJ A;  1DDX A;  3MDL A;  4IG5 A;  3N8X A;  1FE2 A;  3N8Z A;  3R55 A;  4OTY A;  3N8Y B;  5FIW C;  4KVJ A;  3N8F A;  3QF1 A;  3NAK A;  1DIY A;  5F1A A;  1HT5 A;  3KRQ A;  1CX2 A;  5FF1 A;  4C1M C;  3FAQ A;  3ERH A;  4RUT A;  4NJB A;  2QPK A;  4GN6 A;  1MYP C;  3ZS1 C;  4RRY A;  4OTJ A;  3OLT A;  4KVK A;  3GCL A;  3NTG A;  3PGH A;  3HS5 A;  4E1G A;  3F9P C;  2O86 A;  3RKE A;  2EFB A;  4GM7 A;  4N7A A;  1DNU C;  4RRX A;  5IKV A;  3GC1 A;  2IPS A;  4HHR A;  3KK6 A;  1PRH A;  3FNL A;  3OGW A;  3SXV A;  5KIR A;  3OLU A;  5JW1 A;  3R5Q A;  3RR3 A;  3V6Q A;  4OEK A;  5JVY A;  4NT3 A;  1EBV A;  3QL6 A;  4M11 A;  3LN0 A;  3NYH A;  2Z5Z A;  4RRW A;  3HS6 A;  3KRK A;  2GJM A;  1D5L C;  1PTH A;  3N8W A;  1DNW C;  5GLS A;  2OYE P;  3GCK A;  3S4F A;  2PT3 A;  4PNX A;  3ZS0 C;  4M10 A;  1U67 A;  1CVU A;  5IKR A;  1EQH A;  2OJV A;  3MQE A;  4DL1 C;  3QMO A;  1EQG A;  4COX A;  2EHA A;  2E9E A;  5HPW A;  1D2V C;  1HT8 A;  1MHL C;  3UBA A;  2IKC A;  2AYL A;  1D7W C;  4QJQ A;  3ERI A;  2PUM A;  1CXP C;  5IKQ A;  3N8Y A;  4LJJ A;  4KSZ A;  2R5L A;  5GH0 A;  5IKT A;  3Q9K A;  3LN1 A;  6COX A;  4RRZ A;  5COX A;  4PH9 A;  4QYQ A;  3Q7D A;  3I6N A;  4MSF A;  3TZI A;  1Q4G A;  4O1Z A;  3R5O A; 
#chains in the Genus database with same CATH topology
 3NTB A;  5B72 A;  5JVZ A;  3BXI A;  5FDQ A;  3HS7 A;  3TGY A;  1PGE A;  4Z0L A;  2QQT A;  1PXX A;  4Y55 A;  4KVL A;  2QRB A;  3NT1 A;  3N8W B;  3R4X A;  1CQE A;  4HHS A;  2NQX A;  2OYU P;  3NIU A;  4FM5 A;  4RS0 A;  5F19 A;  3QH0 A;  3PY4 A;  3N8V A;  1IGZ A;  1IGX A;  3GCJ A;  1DDX A;  3MDL A;  4IG5 A;  3N8X A;  1FE2 A;  3N8Z A;  3R55 A;  4OTY A;  3N8Y B;  5FIW C;  4KVJ A;  3N8F A;  3QF1 A;  3NAK A;  1DIY A;  5F1A A;  1HT5 A;  3KRQ A;  1CX2 A;  5FF1 A;  4C1M C;  3FAQ A;  3ERH A;  4RUT A;  4NJB A;  2QPK A;  4GN6 A;  1MYP C;  3ZS1 C;  4RRY A;  4OTJ A;  3OLT A;  4KVK A;  3GCL A;  3NTG A;  3PGH A;  3HS5 A;  4E1G A;  3F9P C;  2O86 A;  3RKE A;  2EFB A;  4GM7 A;  4N7A A;  1DNU C;  4RRX A;  5IKV A;  3GC1 A;  2IPS A;  4HHR A;  3KK6 A;  1PRH A;  3FNL A;  3OGW A;  3SXV A;  5KIR A;  3OLU A;  5JW1 A;  3R5Q A;  3RR3 A;  3V6Q A;  4OEK A;  5JVY A;  4NT3 A;  1EBV A;  3QL6 A;  4M11 A;  3LN0 A;  3NYH A;  2Z5Z A;  4RRW A;  3HS6 A;  3KRK A;  2GJM A;  1D5L C;  1PTH A;  3N8W A;  1DNW C;  5GLS A;  2OYE P;  3GCK A;  3S4F A;  2PT3 A;  4PNX A;  3ZS0 C;  4M10 A;  1U67 A;  1CVU A;  5IKR A;  1EQH A;  2OJV A;  3MQE A;  4DL1 C;  3QMO A;  1EQG A;  4COX A;  2EHA A;  2E9E A;  5HPW A;  1D2V C;  1HT8 A;  1MHL C;  3UBA A;  2IKC A;  2AYL A;  1D7W C;  4QJQ A;  3ERI A;  2PUM A;  1CXP C;  5IKQ A;  3N8Y A;  4LJJ A;  4KSZ A;  2R5L A;  5GH0 A;  5IKT A;  3Q9K A;  3LN1 A;  6COX A;  4RRZ A;  5COX A;  4PH9 A;  4QYQ A;  3Q7D A;  3I6N A;  4MSF A;  3TZI A;  1Q4G A;  4O1Z A;  3R5O A; 
#chains in the Genus database with same CATH homology
 3NTB A;  5B72 A;  5JVZ A;  3BXI A;  5FDQ A;  3HS7 A;  3TGY A;  1PGE A;  4Z0L A;  2QQT A;  1PXX A;  4Y55 A;  4KVL A;  2QRB A;  3NT1 A;  3N8W B;  3R4X A;  1CQE A;  4HHS A;  2NQX A;  2OYU P;  3NIU A;  4FM5 A;  4RS0 A;  5F19 A;  3QH0 A;  3PY4 A;  3N8V A;  1IGZ A;  1IGX A;  3GCJ A;  1DDX A;  3MDL A;  4IG5 A;  3N8X A;  1FE2 A;  3N8Z A;  3R55 A;  4OTY A;  3N8Y B;  5FIW C;  4KVJ A;  3N8F A;  3QF1 A;  3NAK A;  1DIY A;  5F1A A;  1HT5 A;  3KRQ A;  1CX2 A;  5FF1 A;  4C1M C;  3FAQ A;  3ERH A;  4RUT A;  4NJB A;  2QPK A;  4GN6 A;  1MYP C;  3ZS1 C;  4RRY A;  4OTJ A;  3OLT A;  4KVK A;  3GCL A;  3NTG A;  3PGH A;  3HS5 A;  4E1G A;  3F9P C;  2O86 A;  3RKE A;  2EFB A;  4GM7 A;  4N7A A;  1DNU C;  4RRX A;  5IKV A;  3GC1 A;  2IPS A;  4HHR A;  3KK6 A;  1PRH A;  3FNL A;  3OGW A;  3SXV A;  5KIR A;  3OLU A;  5JW1 A;  3R5Q A;  3RR3 A;  3V6Q A;  4OEK A;  5JVY A;  4NT3 A;  1EBV A;  3QL6 A;  4M11 A;  3LN0 A;  3NYH A;  2Z5Z A;  4RRW A;  3HS6 A;  3KRK A;  2GJM A;  1D5L C;  1PTH A;  3N8W A;  1DNW C;  5GLS A;  2OYE P;  3GCK A;  3S4F A;  2PT3 A;  4PNX A;  3ZS0 C;  4M10 A;  1U67 A;  1CVU A;  5IKR A;  1EQH A;  2OJV A;  3MQE A;  4DL1 C;  3QMO A;  1EQG A;  4COX A;  2EHA A;  2E9E A;  5HPW A;  1D2V C;  1HT8 A;  1MHL C;  3UBA A;  2IKC A;  2AYL A;  1D7W C;  4QJQ A;  3ERI A;  2PUM A;  1CXP C;  5IKQ A;  3N8Y A;  4LJJ A;  4KSZ A;  2R5L A;  5GH0 A;  5IKT A;  3Q9K A;  3LN1 A;  6COX A;  4RRZ A;  5COX A;  4PH9 A;  4QYQ A;  3Q7D A;  3I6N A;  4MSF A;  3TZI A;  1Q4G A;  4O1Z A;  3R5O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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