1DTVA

Nmr structure of the leech carboxypeptidase inhibitor (lci)
Total Genus 5
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
67
structure length
67
Chain Sequence
GSHTPDESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPYVE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords CARBOXYPEPTIDASE INHIBITOR
publication title Structure of a novel leech carboxypeptidase inhibitor determined free in solution and in complex with human carboxypeptidase A2.
pubmed doi rcsb
total genus 5
structure length 67
sequence length 67
ec nomenclature
pdb deposition date 2000-01-13
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1040.10 Alpha Beta 2-Layer Sandwich Carboxypeptidase Inhibitor; Chain A Carboxypeptidase inhibitor 1dtvA00
1ZFIA 1ZFLA 1DTDB 1DTVA 2ABZC
chains in the Genus database with same CATH superfamily
3HVNA 1M3JA 1DTDB 4HSCX 3CQFA 1ZFIA 3G2PA 1DTVA 3G2MA 1M3IA 1ZFLA 3PJVD 3G2OA 1PFOA 1S3RA 4BIKA 3IF8B 3G2QA 2ABZC
chains in the Genus database with same CATH topology
1ZFIA 1ZFLA 1DTDB 1DTVA 2ABZC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZFI A;  1ZFL A;  1DTD B;  1DTV A;  2ABZ C; 
#chains in the Genus database with same CATH topology
 3HVN A;  1M3J A;  1DTD B;  4HSC X;  3CQF A;  1ZFI A;  3G2P A;  1DTV A;  3G2M A;  1M3I A;  1ZFL A;  3PJV D;  3G2O A;  1PFO A;  1S3R A;  4BIK A;  3IF8 B;  3G2Q A;  2ABZ C; 
#chains in the Genus database with same CATH homology
 1ZFI A;  1ZFL A;  1DTD B;  1DTV A;  2ABZ C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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