1E44B

Ribonuclease domain of colicin e3 in complex with its immunity protein
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
96
structure length
96
Chain Sequence
GFKDYGHDYHPAPKTENIKGLGDLKPGIPKTPKQNGGGKRKRWTGDKGRKIYEWDSQHGELEGYRASDGQHLGSFDPKTGNQLKGPDPKRNIKKYL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ribonuclease
molecule keywords IMMUNITY PROTEIN
publication title Inhibition of a Ribosome Inactivating Ribonuclease: The Crystal Structure of the Cytotoxic Domain of Colicin E3 in Complex with its Immunity Protein
pubmed doi rcsb
source organism Escherichia coli
total genus 21
structure length 96
sequence length 96
ec nomenclature
pdb deposition date 2000-06-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF09000 Cytotoxic Cytotoxic
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.380.10 Alpha Beta Roll Ribonuclease domain of colicin e3 (Residues 456-551) Colicin E3-like ribonuclease domain 1e44B00
1E44B 1JCHA 2B5UA 4UDMB
chains in the Genus database with same CATH superfamily
1E44B 4NTQA 2B5UA 1JCHA 4UDMB
chains in the Genus database with same CATH topology
1E44B 1JCHA 2B5UA 4UDMB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E44 B;  1JCH A;  2B5U A;  4UDM B; 
#chains in the Genus database with same CATH topology
 1E44 B;  4NTQ A;  2B5U A;  1JCH A;  4UDM B; 
#chains in the Genus database with same CATH homology
 1E44 B;  1JCH A;  2B5U A;  4UDM B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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