1ED7A

Solution structure of the chitin-binding domain of bacillus circulans wl-12 chitinase a1
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
45
structure length
45
Chain Sequence
AWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNVPALWQLQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Solution structure of the chitin-binding domain of Bacillus circulans WL-12 chitinase A1.
pubmed doi rcsb
molecule tags Hydrolase
source organism Bacillus circulans
molecule keywords CHITINASE A1
total genus 4
structure length 45
sequence length 45
ec nomenclature ec 3.2.1.14: Chitinase.
pdb deposition date 2000-01-27
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.10.20 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) Carbohydrate-binding module superfamily 5/12 1ed7A00
1W1PA 1W1VA 1UR8A 1H0IA 1GPFA 4Z2IA 1O6IA 4HMDA 3WD4A 4Z2LA 1E6RA 1W1TA 3WD0A 3WD2A 4HMCA 1E6PA 1W1YA 1H0GA 1E15A 1GOIA 1E6NA 2RTSA 1E6ZA 1UR9A 2D49A 4MB3A 4MB4A 4TX8A 1OGBA 1ED7A 4Z2HA 1OGGA 3WD1A 4Z2JA 4Z2KA 4MB5A 4Z2GA 3WD3A 4HMEA 1AIWA
chains in the Genus database with same CATH superfamily
1W1PA 1YU2A 2Y2QA 2Y2GA 4IBFA 3L28A 4IBCA 4OJOA 2FN2A 2JCHA 3MQLA 1W1TA 4IBBA 2BG1A 1H0GA 1E15A 1GOIA 3FKEA 1UR9A 4MB3A 1E8BA 4MB4A 4MB5A 4IBJA 3M7PA 4IBEA 4OUIA 2Y2JA 1J7MA 3L25A 2XD5A 2Y2KA 2XD1A 2Y2IA 3KS4A 4Z2IA 4NZ4A 1O6IA 2Y2PA 4HMDA 4Z2LA 3HSHA 4NZ1A 4HMCA 4OJLA 1W1YA 4IBIA 1YU4A 1E6NA 1YU3A 1QO6A 2D49A 2Y2NA 4TX8A 1YU1A 4QNLA 1OGBA 1CK7A 4Z2HA 4Z2JA 1PDCA 3WD3A 4GHAA 1W1VA 1UR8A 2Y2LA 2V5OA 1GPFA 2IOUA 3WX7A 2FFFB 2Y2OA 1L6JA 3WD4A 1E6RA 3WD0A 5BPVA 1E6PA 4GHLA 2Y2HA 3L29A 4NZ3A 3L2AA 4LG2A 4IBGA 2RTSA 4OJPA 4NY2A 4OJ6A 4NYYA 3L27A 1E88A 3KS8A 4IJEA 1AIWA 1EAKA 1H8PA 4IBDA 1H0IA 3HONA 1KS0A 1YU0A 4NZ5A 3WD2A 4NYUA 1GXDA 4IJFA 4GH9A 1E6ZA 1CXWA 4OJ5A 3N3FA 1ED7A 1OGGA 3WD1A 2UWXA 3L26A 1YUEA 4Z2KA 2Y2MA 4IBKA 2JE5A 4Z2GA 4HMEA
chains in the Genus database with same CATH topology
1W1PA 1W1VA 1UR8A 1H0IA 1GPFA 4Z2IA 1O6IA 4HMDA 3WD4A 4Z2LA 1E6RA 1W1TA 3WD0A 3WD2A 4HMCA 1E6PA 1W1YA 1H0GA 1E15A 1GOIA 1E6NA 2RTSA 1E6ZA 1UR9A 2D49A 4MB3A 4MB4A 4TX8A 1OGBA 1ED7A 4Z2HA 1OGGA 3WD1A 4Z2JA 4Z2KA 4MB5A 4Z2GA 3WD3A 4HMEA 1AIWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W1P A;  1W1V A;  1UR8 A;  1H0I A;  1GPF A;  4Z2I A;  1O6I A;  4HMD A;  3WD4 A;  4Z2L A;  1E6R A;  1W1T A;  3WD0 A;  3WD2 A;  4HMC A;  1E6P A;  1W1Y A;  1H0G A;  1E15 A;  1GOI A;  1E6N A;  2RTS A;  1E6Z A;  1UR9 A;  2D49 A;  4MB3 A;  4MB4 A;  4TX8 A;  1OGB A;  1ED7 A;  4Z2H A;  1OGG A;  3WD1 A;  4Z2J A;  4Z2K A;  4MB5 A;  4Z2G A;  3WD3 A;  4HME A;  1AIW A; 
#chains in the Genus database with same CATH topology
 1W1P A;  1YU2 A;  2Y2Q A;  2Y2G A;  4IBF A;  3L28 A;  4IBC A;  4OJO A;  2FN2 A;  2JCH A;  3MQL A;  1W1T A;  4IBB A;  2BG1 A;  1H0G A;  1E15 A;  1GOI A;  3FKE A;  1UR9 A;  4MB3 A;  1E8B A;  4MB4 A;  4MB5 A;  4IBJ A;  3M7P A;  4IBE A;  4OUI A;  2Y2J A;  1J7M A;  3L25 A;  2XD5 A;  2Y2K A;  2XD1 A;  2Y2I A;  3KS4 A;  4Z2I A;  4NZ4 A;  1O6I A;  2Y2P A;  4HMD A;  4Z2L A;  3HSH A;  4NZ1 A;  4HMC A;  4OJL A;  1W1Y A;  4IBI A;  1YU4 A;  1E6N A;  1YU3 A;  1QO6 A;  2D49 A;  2Y2N A;  4TX8 A;  1YU1 A;  4QNL A;  1OGB A;  1CK7 A;  4Z2H A;  4Z2J A;  1PDC A;  3WD3 A;  4GHA A;  1W1V A;  1UR8 A;  2Y2L A;  2V5O A;  1GPF A;  2IOU A;  3WX7 A;  2FFF B;  2Y2O A;  1L6J A;  3WD4 A;  1E6R A;  3WD0 A;  5BPV A;  1E6P A;  4GHL A;  2Y2H A;  3L29 A;  4NZ3 A;  3L2A A;  4LG2 A;  4IBG A;  2RTS A;  4OJP A;  4NY2 A;  4OJ6 A;  4NYY A;  3L27 A;  1E88 A;  3KS8 A;  4IJE A;  1AIW A;  1EAK A;  1H8P A;  4IBD A;  1H0I A;  3HON A;  1KS0 A;  1YU0 A;  4NZ5 A;  3WD2 A;  4NYU A;  1GXD A;  4IJF A;  4GH9 A;  1E6Z A;  1CXW A;  4OJ5 A;  3N3F A;  1ED7 A;  1OGG A;  3WD1 A;  2UWX A;  3L26 A;  1YUE A;  4Z2K A;  2Y2M A;  4IBK A;  2JE5 A;  4Z2G A;  4HME A; 
#chains in the Genus database with same CATH homology
 1W1P A;  1W1V A;  1UR8 A;  1H0I A;  1GPF A;  4Z2I A;  1O6I A;  4HMD A;  3WD4 A;  4Z2L A;  1E6R A;  1W1T A;  3WD0 A;  3WD2 A;  4HMC A;  1E6P A;  1W1Y A;  1H0G A;  1E15 A;  1GOI A;  1E6N A;  2RTS A;  1E6Z A;  1UR9 A;  2D49 A;  4MB3 A;  4MB4 A;  4TX8 A;  1OGB A;  1ED7 A;  4Z2H A;  1OGG A;  3WD1 A;  4Z2J A;  4Z2K A;  4MB5 A;  4Z2G A;  3WD3 A;  4HME A;  1AIW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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