1EN7A

Endonuclease vii (endovii) from phage t4
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
157
structure length
157
Chain Sequence
MLLTGKLYKEEKQKFYDAQNGKCLICQRELNPDVQANHLDHDHELNGPKAGKVRGLLCNLCNAAEGQMKHKFNRSGLKGQGVDYLEWLENLLTYLKSDYTQNNIHPNFVGDKSKEFSRLGKEEMMAEMLQRGFEYNESDTKTQLIASFKKQLRKSLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords RECOMBINATION ENDONUCLEASE VII
publication title X-ray structure of T4 endonuclease VII: a DNA junction resolvase with a novel fold and unusual domain-swapped dimer architecture.
pubmed doi rcsb
source organism Enterobacteria phage t4
total genus 50
structure length 157
sequence length 157
chains with identical sequence B
ec nomenclature ec 3.1.22.4: Crossover junction endodeoxyribonuclease.
pdb deposition date 1999-02-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02945 Endonuclease_7 Recombination endonuclease VII
A PF09124 Endonuc-dimeris T4 recombination endonuclease VII, dimerisation
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.720.10 Mainly Alpha Orthogonal Bundle Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 1en7A02
3.40.1800.10 Alpha Beta 3-Layer(aba) Sandwich His-Me finger endonuclease fold His-Me finger endonucleases 1en7A01
1E7LA 2HJQA 3L0OA 2QNFA 1A63A 2A8VA 3FC3A 2QNCA 1A8VA 1E7DA 3GOXA 1EN7A 1A62A
chains in the Genus database with same CATH superfamily
2G80A 2W51A 1JJRA 1JEQA 1Y02A 3FLGA 1E7DA 1PZWA 3GOXA 2MPHA 2RNNA 2KW9A 1H1JS 1H9FA 1V66A 2DK4A 2KVDA 2LD7A 1YNSA 2ODGC 3L0OA 5CIUA 1ZBHA 1H9EA 3FC3A 2QNCA 1A8VA 1ZS9A 2RNOA 3LLRA 1GL9B 1E7LA 2HJQA 2KVEA 3QKJA 1GKUB 2KFVA 4BITA 2A8VA 2JVWA 1JEIA 1EN7A 2N1UA 1A62A 1KHCA 2ODCI 2LC3A 4UZWA 2QNFA 1A63A 2KVUA 1GJJA 2WQGA 2KDPA
chains in the Genus database with same CATH topology
2G80A 2W51A 1Y02A 1E7DA 3GOXA 2MPHA 1H9FA 2DK4A 2LD7A 2ODGC 1YNSA 3L0OA 1H9EA 3FC3A 2QNCA 1A8VA 1ZS9A 1GL9B 1E7LA 2HJQA 1GKUB 2KFVA 2A8VA 1JEIA 1EN7A 1A62A 2ODCI 2LC3A 2QNFA 1A63A 1GJJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E7L A;  2HJQ A;  3L0O A;  2QNF A;  1A63 A;  2A8V A;  3FC3 A;  2QNC A;  1A8V A;  1E7D A;  3GOX A;  1EN7 A;  1A62 A; 
#chains in the Genus database with same CATH topology
 2G80 A;  2W51 A;  1JJR A;  1JEQ A;  1Y02 A;  3FLG A;  1E7D A;  1PZW A;  3GOX A;  2MPH A;  2RNN A;  2KW9 A;  1H1J S;  1H9F A;  1V66 A;  2DK4 A;  2KVD A;  2LD7 A;  1YNS A;  2ODG C;  3L0O A;  5CIU A;  1ZBH A;  1H9E A;  3FC3 A;  2QNC A;  1A8V A;  1ZS9 A;  2RNO A;  3LLR A;  1GL9 B;  1E7L A;  2HJQ A;  2KVE A;  3QKJ A;  1GKU B;  2KFV A;  4BIT A;  2A8V A;  2JVW A;  1JEI A;  1EN7 A;  2N1U A;  1A62 A;  1KHC A;  2ODC I;  2LC3 A;  4UZW A;  2QNF A;  1A63 A;  2KVU A;  1GJJ A;  2WQG A;  2KDP A; 
#chains in the Genus database with same CATH homology
 2G80 A;  2W51 A;  1Y02 A;  1E7D A;  3GOX A;  2MPH A;  1H9F A;  2DK4 A;  2LD7 A;  2ODG C;  1YNS A;  3L0O A;  1H9E A;  3FC3 A;  2QNC A;  1A8V A;  1ZS9 A;  1GL9 B;  1E7L A;  2HJQ A;  1GKU B;  2KFV A;  2A8V A;  1JEI A;  1EN7 A;  1A62 A;  2ODC I;  2LC3 A;  2QNF A;  1A63 A;  1GJJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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