1EOEA

Crystal structure of the v135r mutant of a shaker t1 domain
Total Genus 33
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
33
sequence length
100
structure length
100
Chain Sequence
ERVVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPRNVPLDVFSEEIKFYELGENAFERYREDEGF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords POTASSIUM CHANNEL KV1.1
publication title Voltage dependent activation of potassium channels is coupled to T1 domain structure.
pubmed doi rcsb
source organism Aplysia californica
total genus 33
structure length 100
sequence length 100
ec nomenclature
pdb deposition date 2000-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02214 BTB_2 BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 1eoeA00
2ASSA 2NZ0B 4UIJA 4W9LB 3LUTB 4AJYC 2Z8HA 3OGMA 1DSXA 4JTDB 4B95B 3DRZA 5H7GA 1EOFA 5IBKA 1EXBE 4CXIA 1QDVA 5HZGC 4AWJB 2IF5A 3ZNGB 3ZTCB 2A79B 5EUPA 1EOEA 4W9KB 2P1MA 4UYIA 2OVRA 3MKSA 1FS1B 1R28A 3HQIA 3HVEA 4W9GB 2OVPA 4U2NA 1HV2A 4EOZA 3OGLA 5BXHA 1LDKD 4W9JB 2NN2A 4JTAB 3ZTDB 3E4UA 3WSOB 2P1NA 2MA9C 2IZVC 2IHCA 4CXTA 3M4TA 4W9DB 2PPIA 5JH5B 3OGKA 2R9RB 3BIMA 4WQOC 3GA1A 1FS2B 1EODA 4W9FB 2JZ3C 2E31B 3LBZA 5DAFA 2P1PA 1NEXA 3B84A 1FQVB 4HXIA 4BKSB 3C6OA 1S1GA 4W9EB 3OHUA 3FKCA 3HTMA 5LLIB 5DADA 4B9KE 3ZRFB 1VCBB 2YY9A 1LM8C 3M52A 4CRHA 4I6JC 1T1DA 1NN7A 2OVQA 1R2BA 1BUOA 3ZUNB 4BGCA 1LQBB 2C9WC 4BKTB 5H7HA 4JGHC 4W9IB 4W9HB 5A15A 1A68A 3KVTA 5BXDA 2VKPA 2VPKA 3DCGB 3C6PA 5HYWB 2P1QA 1R29A 3LNMB 5A6RA 5FTAA 2P1OA 4CP3A 2Q81A 3OHVA 1P22B 3HVEB 4J8ZA 2ASTA 2I2RA 3M8VA 4AP2A 4N9F5 4CXJA 4U77A 3ZRCB 1CS3A 4W9CB 5BO4C 3L2OA 3ZKJB 2FNJC 2E32B 4W9HH 4APFA 3M5BA 4ZOUA 5BXBA 4JTCB 4B9KB 3C6NA 3V7DA 4U2MA 3I3NA 1QDWA 3HU6A
chains in the Genus database with same CATH superfamily
2ASSA 2NZ0B 4UIJA 4W9LB 3LUTB 4AJYC 2Z8HA 3OGMA 1DSXA 4JTDB 4B95B 3DRZA 5H7GA 1EOFA 5IBKA 1EXBE 4CXIA 1QDVA 4YY8A 5HZGC 4AWJB 2IF5A 3ZNGB 3ZTCB 2A79B 5EUPA 1EOEA 4W9KB 2P1MA 4UYIA 2OVRA 3MKSA 1FS1B 1R28A 3HQIA 3HVEA 4W9GB 2OVPA 4U2NA 1HV2A 4EOZA 3OGLA 5BXHA 1LDKD 4W9JB 2NN2A 4JTAB 3ZTDB 3E4UA 3WSOB 2P1NA 2MA9C 2IZVC 2IHCA 4CXTA 3M4TA 4W9DB 2PPIA 5JH5B 3OGKA 2R9RB 3BIMA 4WQOC 3GA1A 1FS2B 1EODA 4W9FB 2JZ3C 2E31B 3LBZA 5DAFA 2P1PA 1NEXA 3B84A 4ZGCA 1FQVB 3DRXA 4HXIA 4BKSB 3C6OA 1S1GA 4W9EB 3OHUA 3FKCA 3HTMA 5LLIB 5DADA 4B9KE 3ZRFB 1VCBB 2YY9A 1LM8C 3M52A 4CRHA 4I6JC 1T1DA 3DRYA 1NN7A 2OVQA 1R2BA 1BUOA 3ZUNB 4BGCA 1LQBB 2C9WC 4BKTB 5H7HA 4JGHC 4W9IB 4W9HB 5A15A 1A68A 3KVTA 5BXDA 2VKPA 2VPKA 3DCGB 3C6PA 5HYWB 2P1QA 1R29A 3LNMB 5A6RA 5FTAA 2P1OA 4CP3A 2Q81A 3OHVA 1P22B 3HVEB 4J8ZA 2ASTA 2I2RA 3M8VA 4AP2A 4N9F5 4CXJA 4U77A 3ZRCB 1CS3A 4W9CB 5BO4C 3L2OA 3ZKJB 2FNJC 2E32B 4W9HH 4APFA 3M5BA 4ZOUA 5BXBA 4JTCB 4B9KB 3C6NA 3V7DA 4U2MA 3I3NA 1QDWA 3HU6A
chains in the Genus database with same CATH topology
2ASSA 2NZ0B 4UIJA 4W9LB 3LUTB 4AJYC 2Z8HA 3OGMA 1DSXA 4JTDB 4B95B 3DRZA 5H7GA 1EOFA 5IBKA 1EXBE 4CXIA 1QDVA 4YY8A 5HZGC 4AWJB 2IF5A 3ZNGB 3ZTCB 2A79B 5EUPA 1EOEA 4W9KB 2P1MA 4UYIA 2OVRA 3MKSA 1FS1B 1R28A 3HQIA 3HVEA 4W9GB 2OVPA 4U2NA 1HV2A 4EOZA 3OGLA 5BXHA 1LDKD 4W9JB 2NN2A 4JTAB 3ZTDB 3E4UA 3WSOB 2P1NA 2MA9C 2IZVC 2IHCA 4CXTA 3M4TA 4W9DB 2PPIA 5JH5B 3OGKA 2R9RB 3BIMA 4WQOC 3GA1A 1FS2B 1EODA 4W9FB 2JZ3C 2E31B 3LBZA 5DAFA 2P1PA 1NEXA 3B84A 4ZGCA 1FQVB 3DRXA 4HXIA 4BKSB 3C6OA 1S1GA 4W9EB 3OHUA 3FKCA 3HTMA 5LLIB 5DADA 4B9KE 3ZRFB 1VCBB 2YY9A 1LM8C 3M52A 4CRHA 4I6JC 1T1DA 3DRYA 1NN7A 2OVQA 1R2BA 1BUOA 3ZUNB 4BGCA 1LQBB 2C9WC 4BKTB 5H7HA 4JGHC 4W9IB 4W9HB 5A15A 1A68A 3KVTA 5BXDA 2VKPA 2VPKA 3DCGB 3C6PA 5HYWB 2P1QA 1R29A 3LNMB 5A6RA 5FTAA 2P1OA 4CP3A 2Q81A 3OHVA 1P22B 3HVEB 4J8ZA 2ASTA 2I2RA 3M8VA 4AP2A 4N9F5 4CXJA 4U77A 3ZRCB 1CS3A 4W9CB 5BO4C 3L2OA 3ZKJB 2FNJC 2E32B 4W9HH 4APFA 3M5BA 4ZOUA 5BXBA 4JTCB 4B9KB 3C6NA 3V7DA 4U2MA 3I3NA 1QDWA 3HU6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ASS A;  2NZ0 B;  4UIJ A;  4W9L B;  3LUT B;  4AJY C;  2Z8H A;  3OGM A;  1DSX A;  4JTD B;  4B95 B;  3DRZ A;  5H7G A;  1EOF A;  5IBK A;  1EXB E;  4CXI A;  1QDV A;  5HZG C;  4AWJ B;  2IF5 A;  3ZNG B;  3ZTC B;  2A79 B;  5EUP A;  1EOE A;  4W9K B;  2P1M A;  4UYI A;  2OVR A;  3MKS A;  1FS1 B;  1R28 A;  3HQI A;  3HVE A;  4W9G B;  2OVP A;  4U2N A;  1HV2 A;  4EOZ A;  3OGL A;  5BXH A;  1LDK D;  4W9J B;  2NN2 A;  4JTA B;  3ZTD B;  3E4U A;  3WSO B;  2P1N A;  2MA9 C;  2IZV C;  2IHC A;  4CXT A;  3M4T A;  4W9D B;  2PPI A;  5JH5 B;  3OGK A;  2R9R B;  3BIM A;  4WQO C;  3GA1 A;  1FS2 B;  1EOD A;  4W9F B;  2JZ3 C;  2E31 B;  3LBZ A;  5DAF A;  2P1P A;  1NEX A;  3B84 A;  1FQV B;  4HXI A;  4BKS B;  3C6O A;  1S1G A;  4W9E B;  3OHU A;  3FKC A;  3HTM A;  5LLI B;  5DAD A;  4B9K E;  3ZRF B;  1VCB B;  2YY9 A;  1LM8 C;  3M52 A;  4CRH A;  4I6J C;  1T1D A;  1NN7 A;  2OVQ A;  1R2B A;  1BUO A;  3ZUN B;  4BGC A;  1LQB B;  2C9W C;  4BKT B;  5H7H A;  4JGH C;  4W9I B;  4W9H B;  5A15 A;  1A68 A;  3KVT A;  5BXD A;  2VKP A;  2VPK A;  3DCG B;  3C6P A;  5HYW B;  2P1Q A;  1R29 A;  3LNM B;  5A6R A;  5FTA A;  2P1O A;  4CP3 A;  2Q81 A;  3OHV A;  1P22 B;  3HVE B;  4J8Z A;  2AST A;  2I2R A;  3M8V A;  4AP2 A;  4N9F 5;  4CXJ A;  4U77 A;  3ZRC B;  1CS3 A;  4W9C B;  5BO4 C;  3L2O A;  3ZKJ B;  2FNJ C;  2E32 B;  4W9H H;  4APF A;  3M5B A;  4ZOU A;  5BXB A;  4JTC B;  4B9K B;  3C6N A;  3V7D A;  4U2M A;  3I3N A;  1QDW A;  3HU6 A; 
#chains in the Genus database with same CATH topology
 2ASS A;  2NZ0 B;  4UIJ A;  4W9L B;  3LUT B;  4AJY C;  2Z8H A;  3OGM A;  1DSX A;  4JTD B;  4B95 B;  3DRZ A;  5H7G A;  1EOF A;  5IBK A;  1EXB E;  4CXI A;  1QDV A;  4YY8 A;  5HZG C;  4AWJ B;  2IF5 A;  3ZNG B;  3ZTC B;  2A79 B;  5EUP A;  1EOE A;  4W9K B;  2P1M A;  4UYI A;  2OVR A;  3MKS A;  1FS1 B;  1R28 A;  3HQI A;  3HVE A;  4W9G B;  2OVP A;  4U2N A;  1HV2 A;  4EOZ A;  3OGL A;  5BXH A;  1LDK D;  4W9J B;  2NN2 A;  4JTA B;  3ZTD B;  3E4U A;  3WSO B;  2P1N A;  2MA9 C;  2IZV C;  2IHC A;  4CXT A;  3M4T A;  4W9D B;  2PPI A;  5JH5 B;  3OGK A;  2R9R B;  3BIM A;  4WQO C;  3GA1 A;  1FS2 B;  1EOD A;  4W9F B;  2JZ3 C;  2E31 B;  3LBZ A;  5DAF A;  2P1P A;  1NEX A;  3B84 A;  4ZGC A;  1FQV B;  3DRX A;  4HXI A;  4BKS B;  3C6O A;  1S1G A;  4W9E B;  3OHU A;  3FKC A;  3HTM A;  5LLI B;  5DAD A;  4B9K E;  3ZRF B;  1VCB B;  2YY9 A;  1LM8 C;  3M52 A;  4CRH A;  4I6J C;  1T1D A;  3DRY A;  1NN7 A;  2OVQ A;  1R2B A;  1BUO A;  3ZUN B;  4BGC A;  1LQB B;  2C9W C;  4BKT B;  5H7H A;  4JGH C;  4W9I B;  4W9H B;  5A15 A;  1A68 A;  3KVT A;  5BXD A;  2VKP A;  2VPK A;  3DCG B;  3C6P A;  5HYW B;  2P1Q A;  1R29 A;  3LNM B;  5A6R A;  5FTA A;  2P1O A;  4CP3 A;  2Q81 A;  3OHV A;  1P22 B;  3HVE B;  4J8Z A;  2AST A;  2I2R A;  3M8V A;  4AP2 A;  4N9F 5;  4CXJ A;  4U77 A;  3ZRC B;  1CS3 A;  4W9C B;  5BO4 C;  3L2O A;  3ZKJ B;  2FNJ C;  2E32 B;  4W9H H;  4APF A;  3M5B A;  4ZOU A;  5BXB A;  4JTC B;  4B9K B;  3C6N A;  3V7D A;  4U2M A;  3I3N A;  1QDW A;  3HU6 A; 
#chains in the Genus database with same CATH homology
 2ASS A;  2NZ0 B;  4UIJ A;  4W9L B;  3LUT B;  4AJY C;  2Z8H A;  3OGM A;  1DSX A;  4JTD B;  4B95 B;  3DRZ A;  5H7G A;  1EOF A;  5IBK A;  1EXB E;  4CXI A;  1QDV A;  4YY8 A;  5HZG C;  4AWJ B;  2IF5 A;  3ZNG B;  3ZTC B;  2A79 B;  5EUP A;  1EOE A;  4W9K B;  2P1M A;  4UYI A;  2OVR A;  3MKS A;  1FS1 B;  1R28 A;  3HQI A;  3HVE A;  4W9G B;  2OVP A;  4U2N A;  1HV2 A;  4EOZ A;  3OGL A;  5BXH A;  1LDK D;  4W9J B;  2NN2 A;  4JTA B;  3ZTD B;  3E4U A;  3WSO B;  2P1N A;  2MA9 C;  2IZV C;  2IHC A;  4CXT A;  3M4T A;  4W9D B;  2PPI A;  5JH5 B;  3OGK A;  2R9R B;  3BIM A;  4WQO C;  3GA1 A;  1FS2 B;  1EOD A;  4W9F B;  2JZ3 C;  2E31 B;  3LBZ A;  5DAF A;  2P1P A;  1NEX A;  3B84 A;  4ZGC A;  1FQV B;  3DRX A;  4HXI A;  4BKS B;  3C6O A;  1S1G A;  4W9E B;  3OHU A;  3FKC A;  3HTM A;  5LLI B;  5DAD A;  4B9K E;  3ZRF B;  1VCB B;  2YY9 A;  1LM8 C;  3M52 A;  4CRH A;  4I6J C;  1T1D A;  3DRY A;  1NN7 A;  2OVQ A;  1R2B A;  1BUO A;  3ZUN B;  4BGC A;  1LQB B;  2C9W C;  4BKT B;  5H7H A;  4JGH C;  4W9I B;  4W9H B;  5A15 A;  1A68 A;  3KVT A;  5BXD A;  2VKP A;  2VPK A;  3DCG B;  3C6P A;  5HYW B;  2P1Q A;  1R29 A;  3LNM B;  5A6R A;  5FTA A;  2P1O A;  4CP3 A;  2Q81 A;  3OHV A;  1P22 B;  3HVE B;  4J8Z A;  2AST A;  2I2R A;  3M8V A;  4AP2 A;  4N9F 5;  4CXJ A;  4U77 A;  3ZRC B;  1CS3 A;  4W9C B;  5BO4 C;  3L2O A;  3ZKJ B;  2FNJ C;  2E32 B;  4W9H H;  4APF A;  3M5B A;  4ZOU A;  5BXB A;  4JTC B;  4B9K B;  3C6N A;  3V7D A;  4U2M A;  3I3N A;  1QDW A;  3HU6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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