1FAQA

Raf-1 cysteine rich domain, nmr, 27 structures
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
52
structure length
52
Chain Sequence
LTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Serine/threonine protein kinase
molecule keywords RAF-1
publication title The solution structure of the Raf-1 cysteine-rich domain: a novel ras and phospholipid binding site.
pubmed doi rcsb
source organism Homo sapiens
total genus 4
structure length 52
sequence length 52
ec nomenclature ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date 1996-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1faqA00
2ELIA 1XBTA 4UXIA 1TBNA 2QPOA 5FUWA 3KY9A 2J9RA 3UEJA 2ORVA 1KBEA 1Y8FA 4B6DA 2ORWA 5FUXA 1RFHA 2ROWA 4UXHA 1KBFA 2YUUA 1PTRA 4UXJA 2WVJA 2B8TA 3UGDA 2GVIA 1XX6A 1PTQA 3BJIA 3UEYA 4L9MA 3CXLA 1R79A 2QQEA 2ENZA 2DB6A 2VRWB 1TBOA 2J87A 2FNFX 2E73A 1FARA 1FAQA 2JA1A 2QQ0A 2UZ3A 1W4RA 5FUVA 1XA6A 3E2IA 5FUYA 3UGLA 3UFFA 4FKDA 3UGIA 2ENNA
chains in the Genus database with same CATH superfamily
1XBTA 3FC3A 3VE5A 2GKVA 3OVOA 2X52A 2CWHA 1R0RI 3UEJA 2J9RA 2DKVA 1KBEA 1Y8FA 2KCXA 2ORVA 2WCYA 2CWFA 2JZMA 2LB7A 2B0UC 5J8FA 4UXHA 1N13A 2YQPA 1BMOA 1K7UA 3R5CA 3PDNA 3UOEA 3SGQI 1UHAA 7WGAA 1TBRR 5E3PA 5E3RA 1PTQA 2V53A 3B4VC 1OYVI 5EX3A 2KMRA 1H0ZA 1MJAA 2L8EA 1X4SA 3TO6A 1UVGA 1Z2IA 1UUCA 3QTLD 2VRWB 2OD1A 5E3QA 1CE3A 2FNFX 1IY5A 1WTJA 1DS2I 1SGRI 1SGEI 1CGJI 3VDPA 3GOXA 1W4RA 5FUVA 4E1PA 1NUBA 2XRCA 1VDDA 2ELIA 1Q9BA 2OVOA 3OXGA 4OVOA 2QPOA 3QAHA 5FUWA 2CJSC 2QQDA 1ULMA 3KY9A 1SGPI 1UVFA 2NU1I 1CSOI 2P6AC 1RFHA 4HGUA 1CT0I 1X74A 1KBFA 2RIJA 2WVJA 1TGSI 1TBQR 1TOTA 1XX6A 1SGNI 3TJQA 2SGPI 1Z7KB 1LR7A 1U5KA 3TO9A 3CXLA 1R79A 1OMTA 1YTPA 2K9HA 3OXLA 2GIVA 2V1CA 1WGCA 2X3TA 2DB6A 1MT1A 1CGII 1OVOA 2Y0MA 1FARA 3R5AA 2L7XA 2NU0I 3R5BA 2SGQI 1XA6A 3E2IA 3SEKC 3UGLA 3UFFA 1CHOI 2LUYA 2ODDA 3UGIA 2N71A 2ENNA 2SGFI 2JYYA 2E5RA 5DAEA 1HPTA 1MJBA 1TBNA 1W3SA 1LR8A 1TIHA 1ULNA 2KMQA 2NU4I 1CT4I 5HI7A 2GKTI 2ORWA 5HQ8A 5FUXA 2KMPA 3HH2C 2QQCA 3TO7A 2YUUA 4UXJA 3SGBI 2W0TA 3UGDA 2N17A 4WP4A 2GKRI 2GVIA 1SGDI 3BJIA 2BUSA 3OXFA 2N52A 3MEKA 3R5DA 1PCEA 2QQEA 2WGCA 3RU0A 2F3CI 1K7TA 1V1HA 2M5XA 2N1AB 4A24A 5CCLA 1YU6C 2NU2I 2NU3I 1WGTA 1TBOA 1OMUA 2J87A 2E73A 2OZUA 1P9ZA 2JA1A 4E1RA 1CT2I 1IW4A 3OL0A 5FUYA 3TOBA 5J8CA 4FKDA 1AN1I 1S20A 2A20A 2SGDI 4AMLA 1FYBA 2JW6A 4UXIA 2RC4A 4GI3C 5EX0A 2SGEI 1M8BA 1SGYI 1DS3I 4B6DA 1MJ9A 3E59A 1HDLA 2V1CC 1HEVA 2ROWA 3FSXA 3TOAA 3FSYA 3VDUA 1PTRA 1M8CA 2DIPA 4MPIA 4SGBI 1Y1CA 5JHWC 1TUSA 2B8TA 2OU2A 1ULKA 4JCVE 1KMAA 1LR9A 5CCMA 4DNCA 3UEYA 4L9MA 1IY6A 2PQ8A 2UVOA 1BUSA 2ENZA 1Y1BA 2CWGA 1FY7A 1NXUA 1PJUA 9WGAA 1SGQI 2JXDA 1HJAI 2ERWA 1FAQA 1V1IA 1K7VA 2LEOA 1P9GA 3QWPA 2QQ0A 1PPFI 2UZ3A 3D00A 2ARPF 2KMOA 1TURA 1WKXA
chains in the Genus database with same CATH topology
1XBTA 3FC3A 3VE5A 2GKVA 3OVOA 1R0RI 3UEJA 2J9RA 2KCXA 1KBEA 1Y8FA 2ORVA 2WCYA 2JZMA 2B0UC 4UXHA 1N13A 2YQPA 1BMOA 3PDNA 3SGQI 1TBRR 1PTQA 2V53A 3B4VC 1OYVI 5EX3A 2KMRA 1H0ZA 2L8EA 1X4SA 1UVGA 1UUCA 3QTLD 2VRWB 2OD1A 1CE3A 2FNFX 1IY5A 1DS2I 1SGRI 1SGEI 1CGJI 3VDPA 3GOXA 1W4RA 5FUVA 4E1PA 1NUBA 2XRCA 1VDDA 2ELIA 2OVOA 3OXGA 4OVOA 2QPOA 5FUWA 2CJSC 2QQDA 3KY9A 1SGPI 1UVFA 2NU1I 1CSOI 2P6AC 1RFHA 4HGUA 1CT0I 1X74A 1KBFA 2WVJA 1TGSI 1TBQR 1TOTA 1XX6A 1SGNI 3TJQA 2SGPI 1Z7KB 1LR7A 1U5KA 3CXLA 1R79A 1OMTA 1YTPA 2K9HA 3OXLA 2V1CA 2DB6A 1MT1A 1CGII 1OVOA 1FARA 2L7XA 2NU0I 2SGQI 1XA6A 3E2IA 3SEKC 3UGLA 3UFFA 1CHOI 2LUYA 2ODDA 3UGIA 2N71A 2ENNA 2SGFI 2JYYA 2E5RA 5DAEA 1HPTA 1TBNA 1W3SA 1LR8A 1TIHA 2KMQA 2NU4I 1CT4I 5HI7A 2GKTI 2ORWA 5HQ8A 5FUXA 2KMPA 3HH2C 2QQCA 2YUUA 4UXJA 3SGBI 2W0TA 3UGDA 2N17A 2GKRI 2GVIA 1SGDI 3BJIA 2BUSA 3OXFA 2N52A 3MEKA 1PCEA 2QQEA 3RU0A 2F3CI 1V1HA 2M5XA 2N1AB 4A24A 5CCLA 1YU6C 2NU2I 2NU3I 1TBOA 1OMUA 2J87A 2E73A 2JA1A 4E1RA 1CT2I 1IW4A 3OL0A 5FUYA 4FKDA 1AN1I 2SGDI 2A20A 1FYBA 2JW6A 4UXIA 4GI3C 5EX0A 2SGEI 1M8BA 1SGYI 1DS3I 4B6DA 3E59A 1HDLA 2V1CC 2ROWA 3VDUA 1PTRA 1M8CA 2DIPA 4SGBI 5JHWC 1Y1CA 1TUSA 2B8TA 4JCVE 1KMAA 1LR9A 5CCMA 1IY6A 3UEYA 4L9MA 1BUSA 2ENZA 1Y1BA 1PJUA 1SGQI 2JXDA 1HJAI 2ERWA 1FAQA 1V1IA 2LEOA 3QWPA 2QQ0A 1PPFI 2UZ3A 3D00A 2ARPF 2KMOA 1TURA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ELI A;  1XBT A;  4UXI A;  1TBN A;  2QPO A;  5FUW A;  3KY9 A;  2J9R A;  3UEJ A;  2ORV A;  1KBE A;  1Y8F A;  4B6D A;  2ORW A;  5FUX A;  1RFH A;  2ROW A;  4UXH A;  1KBF A;  2YUU A;  1PTR A;  4UXJ A;  2WVJ A;  2B8T A;  3UGD A;  2GVI A;  1XX6 A;  1PTQ A;  3BJI A;  3UEY A;  4L9M A;  3CXL A;  1R79 A;  2QQE A;  2ENZ A;  2DB6 A;  2VRW B;  1TBO A;  2J87 A;  2FNF X;  2E73 A;  1FAR A;  1FAQ A;  2JA1 A;  2QQ0 A;  2UZ3 A;  1W4R A;  5FUV A;  1XA6 A;  3E2I A;  5FUY A;  3UGL A;  3UFF A;  4FKD A;  3UGI A;  2ENN A; 
#chains in the Genus database with same CATH topology
 1XBT A;  3FC3 A;  3VE5 A;  2GKV A;  3OVO A;  2X52 A;  2CWH A;  1R0R I;  3UEJ A;  2J9R A;  2DKV A;  1KBE A;  1Y8F A;  2KCX A;  2ORV A;  2WCY A;  2CWF A;  2JZM A;  2LB7 A;  2B0U C;  5J8F A;  4UXH A;  1N13 A;  2YQP A;  1BMO A;  1K7U A;  3R5C A;  3PDN A;  3UOE A;  3SGQ I;  1UHA A;  7WGA A;  1TBR R;  5E3P A;  5E3R A;  1PTQ A;  2V53 A;  3B4V C;  1OYV I;  5EX3 A;  2KMR A;  1H0Z A;  1MJA A;  2L8E A;  1X4S A;  3TO6 A;  1UVG A;  1Z2I A;  1UUC A;  3QTL D;  2VRW B;  2OD1 A;  5E3Q A;  1CE3 A;  2FNF X;  1IY5 A;  1WTJ A;  1DS2 I;  1SGR I;  1SGE I;  1CGJ I;  3VDP A;  3GOX A;  1W4R A;  5FUV A;  4E1P A;  1NUB A;  2XRC A;  1VDD A;  2ELI A;  1Q9B A;  2OVO A;  3OXG A;  4OVO A;  2QPO A;  3QAH A;  5FUW A;  2CJS C;  2QQD A;  1ULM A;  3KY9 A;  1SGP I;  1UVF A;  2NU1 I;  1CSO I;  2P6A C;  1RFH A;  4HGU A;  1CT0 I;  1X74 A;  1KBF A;  2RIJ A;  2WVJ A;  1TGS I;  1TBQ R;  1TOT A;  1XX6 A;  1SGN I;  3TJQ A;  2SGP I;  1Z7K B;  1LR7 A;  1U5K A;  3TO9 A;  3CXL A;  1R79 A;  1OMT A;  1YTP A;  2K9H A;  3OXL A;  2GIV A;  2V1C A;  1WGC A;  2X3T A;  2DB6 A;  1MT1 A;  1CGI I;  1OVO A;  2Y0M A;  1FAR A;  3R5A A;  2L7X A;  2NU0 I;  3R5B A;  2SGQ I;  1XA6 A;  3E2I A;  3SEK C;  3UGL A;  3UFF A;  1CHO I;  2LUY A;  2ODD A;  3UGI A;  2N71 A;  2ENN A;  2SGF I;  2JYY A;  2E5R A;  5DAE A;  1HPT A;  1MJB A;  1TBN A;  1W3S A;  1LR8 A;  1TIH A;  1ULN A;  2KMQ A;  2NU4 I;  1CT4 I;  5HI7 A;  2GKT I;  2ORW A;  5HQ8 A;  5FUX A;  2KMP A;  3HH2 C;  2QQC A;  3TO7 A;  2YUU A;  4UXJ A;  3SGB I;  2W0T A;  3UGD A;  2N17 A;  4WP4 A;  2GKR I;  2GVI A;  1SGD I;  3BJI A;  2BUS A;  3OXF A;  2N52 A;  3MEK A;  3R5D A;  1PCE A;  2QQE A;  2WGC A;  3RU0 A;  2F3C I;  1K7T A;  1V1H A;  2M5X A;  2N1A B;  4A24 A;  5CCL A;  1YU6 C;  2NU2 I;  2NU3 I;  1WGT A;  1TBO A;  1OMU A;  2J87 A;  2E73 A;  2OZU A;  1P9Z A;  2JA1 A;  4E1R A;  1CT2 I;  1IW4 A;  3OL0 A;  5FUY A;  3TOB A;  5J8C A;  4FKD A;  1AN1 I;  1S20 A;  2A20 A;  2SGD I;  4AML A;  1FYB A;  2JW6 A;  4UXI A;  2RC4 A;  4GI3 C;  5EX0 A;  2SGE I;  1M8B A;  1SGY I;  1DS3 I;  4B6D A;  1MJ9 A;  3E59 A;  1HDL A;  2V1C C;  1HEV A;  2ROW A;  3FSX A;  3TOA A;  3FSY A;  3VDU A;  1PTR A;  1M8C A;  2DIP A;  4MPI A;  4SGB I;  1Y1C A;  5JHW C;  1TUS A;  2B8T A;  2OU2 A;  1ULK A;  4JCV E;  1KMA A;  1LR9 A;  5CCM A;  4DNC A;  3UEY A;  4L9M A;  1IY6 A;  2PQ8 A;  2UVO A;  1BUS A;  2ENZ A;  1Y1B A;  2CWG A;  1FY7 A;  1NXU A;  1PJU A;  9WGA A;  1SGQ I;  2JXD A;  1HJA I;  2ERW A;  1FAQ A;  1V1I A;  1K7V A;  2LEO A;  1P9G A;  3QWP A;  2QQ0 A;  1PPF I;  2UZ3 A;  3D00 A;  2ARP F;  2KMO A;  1TUR A;  1WKX A; 
#chains in the Genus database with same CATH homology
 1XBT A;  3FC3 A;  3VE5 A;  2GKV A;  3OVO A;  1R0R I;  3UEJ A;  2J9R A;  2KCX A;  1KBE A;  1Y8F A;  2ORV A;  2WCY A;  2JZM A;  2B0U C;  4UXH A;  1N13 A;  2YQP A;  1BMO A;  3PDN A;  3SGQ I;  1TBR R;  1PTQ A;  2V53 A;  3B4V C;  1OYV I;  5EX3 A;  2KMR A;  1H0Z A;  2L8E A;  1X4S A;  1UVG A;  1UUC A;  3QTL D;  2VRW B;  2OD1 A;  1CE3 A;  2FNF X;  1IY5 A;  1DS2 I;  1SGR I;  1SGE I;  1CGJ I;  3VDP A;  3GOX A;  1W4R A;  5FUV A;  4E1P A;  1NUB A;  2XRC A;  1VDD A;  2ELI A;  2OVO A;  3OXG A;  4OVO A;  2QPO A;  5FUW A;  2CJS C;  2QQD A;  3KY9 A;  1SGP I;  1UVF A;  2NU1 I;  1CSO I;  2P6A C;  1RFH A;  4HGU A;  1CT0 I;  1X74 A;  1KBF A;  2WVJ A;  1TGS I;  1TBQ R;  1TOT A;  1XX6 A;  1SGN I;  3TJQ A;  2SGP I;  1Z7K B;  1LR7 A;  1U5K A;  3CXL A;  1R79 A;  1OMT A;  1YTP A;  2K9H A;  3OXL A;  2V1C A;  2DB6 A;  1MT1 A;  1CGI I;  1OVO A;  1FAR A;  2L7X A;  2NU0 I;  2SGQ I;  1XA6 A;  3E2I A;  3SEK C;  3UGL A;  3UFF A;  1CHO I;  2LUY A;  2ODD A;  3UGI A;  2N71 A;  2ENN A;  2SGF I;  2JYY A;  2E5R A;  5DAE A;  1HPT A;  1TBN A;  1W3S A;  1LR8 A;  1TIH A;  2KMQ A;  2NU4 I;  1CT4 I;  5HI7 A;  2GKT I;  2ORW A;  5HQ8 A;  5FUX A;  2KMP A;  3HH2 C;  2QQC A;  2YUU A;  4UXJ A;  3SGB I;  2W0T A;  3UGD A;  2N17 A;  2GKR I;  2GVI A;  1SGD I;  3BJI A;  2BUS A;  3OXF A;  2N52 A;  3MEK A;  1PCE A;  2QQE A;  3RU0 A;  2F3C I;  1V1H A;  2M5X A;  2N1A B;  4A24 A;  5CCL A;  1YU6 C;  2NU2 I;  2NU3 I;  1TBO A;  1OMU A;  2J87 A;  2E73 A;  2JA1 A;  4E1R A;  1CT2 I;  1IW4 A;  3OL0 A;  5FUY A;  4FKD A;  1AN1 I;  2SGD I;  2A20 A;  1FYB A;  2JW6 A;  4UXI A;  4GI3 C;  5EX0 A;  2SGE I;  1M8B A;  1SGY I;  1DS3 I;  4B6D A;  3E59 A;  1HDL A;  2V1C C;  2ROW A;  3VDU A;  1PTR A;  1M8C A;  2DIP A;  4SGB I;  5JHW C;  1Y1C A;  1TUS A;  2B8T A;  4JCV E;  1KMA A;  1LR9 A;  5CCM A;  1IY6 A;  3UEY A;  4L9M A;  1BUS A;  2ENZ A;  1Y1B A;  1PJU A;  1SGQ I;  2JXD A;  1HJA I;  2ERW A;  1FAQ A;  1V1I A;  2LEO A;  3QWP A;  2QQ0 A;  1PPF I;  2UZ3 A;  3D00 A;  2ARP F;  2KMO A;  1TUR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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