1FAQA

Raf-1 cysteine rich domain, nmr, 27 structures
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
52
structure length
52
Chain Sequence
LTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Serine/threonine protein kinase
molecule keywords RAF-1
publication title The solution structure of the Raf-1 cysteine-rich domain: a novel ras and phospholipid binding site.
pubmed doi rcsb
source organism Homo sapiens
total genus 4
structure length 52
sequence length 52
ec nomenclature ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date 1996-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1faqA00
2ELIA 4UXIA 1XA6A 2UZ3A 2QPOA 3E2IA 4UXJA 2ENZA 2ORVA 3KY9A 4B6DA 2QQEA 2ROWA 3UFFA 4UXHA 1FAQA 3BJIA 4FKDA 2E73A 2J87A 2DB6A 1TBNA 1PTQA 2VRWB 1KBFA 2ORWA 1PTRA 1W4RA 2B8TA 2JA1A 1XX6A 2QQ0A 3UEYA 1KBEA 3UGDA 1Y8FA 2ENNA 1TBOA 1XBTA 2WVJA 4L9MA 2YUUA 5FUVA 3UEJA 2GVIA 1R79A 3CXLA 5FUYA 2FNFX 3UGLA 5FUXA 3UGIA 1FARA 5FUWA 1RFHA 2J9RA
chains in the Genus database with same CATH superfamily
1WGCA 4UXIA 1SGRI 2UZ3A 2W0TA 1ULKA 2DKVA 4UXJA 2ARPF 1YTPA 2OD1A 4B6DA 1Y1BA 1WGTA 2QQEA 1ULNA 2ROWA 2YQPA 4FKDA 4UXHA 5DAEA 3D00A 3UFFA 1TBNA 5JHWC 1PTQA 1TUSA 2VRWB 2JYYA 1UVGA 2B8TA 2JXDA 1R0RI 1CT0I 1XX6A 2OVOA 3UEYA 1MT1A 1Z7KB 2E5RA 5E3RA 1SGDI 1P9GA 2ENNA 2NU0I 3TJQA 1XBTA 4E1RA 1HEVA 1BUSA 2OZUA 1LR8A 1SGYI 2N17A 2KCXA 3VDUA 7WGAA 1OMUA 1U5KA 2LB7A 1K7VA 2NU2I 1Q9BA 2V53A 1UUCA 2X52A 3SGQI 3VDPA 2FNFX 2JZMA 2X3TA 4DNCA 2N52A 2SGFI 1NUBA 1RFHA 2QQCA 2ODDA 2Y0MA 5FUWA 2CWGA 1CT4I 3RU0A 1KMAA 2GKRI 5HQ8A 2QPOA 1YU6C 3E2IA 4GI3C 1SGPI 2ORVA 2RC4A 3TO7A 4WP4A 3KY9A 1IY5A 1TIHA 2GIVA 2SGDI 3BJIA 1M8CA 3FSYA 5EX3A 2B0UC 2LEOA 1V1IA 1WTJA 1VDDA 2SGQI 1PTRA 3OL0A 3R5CA 2WCYA 1MJ9A 2JA1A 1IY6A 2SGPI 2XRCA 1AN1I 1OYVI 3UOEA 2OU2A 2UVOA 2L7XA 2QQDA 3OXGA 1IW4A 2N1AB 4L9MA 2KMPA 1DS3I 3OVOA 3CXLA 2L8EA 1V1HA 2SGEI 5FUYA 3R5AA 2BUSA 3QTLD 3SGBI 2JW6A 2YUUA 5E3QA 2M5XA 5CCLA 2A20A 2P6AC 3TOAA 1S20A 1W3SA 2ENZA 3FC3A 3QAHA 1FYBA 1UHAA 2F3CI 4JCVE 2E73A 1MJAA 1KBFA 2ORWA 2LUYA 1SGQI 1NXUA 1OMTA 1KBEA 1PCEA 2ERWA 1FY7A 2PQ8A 3R5BA 4OVOA 4SGBI 3UGDA 1PJUA 1CGJI 1M8BA 2NU1I 1TOTA 2CWHA 1CSOI 1N13A 3MEKA 2V1CA 3UEJA 4E1PA 1DS2I 3FSXA 3TO6A 4HGUA 2KMRA 5J8FA 3UGIA 2GKVA 1BMOA 1CE3A 1FARA 3E59A 2NU3I 4AMLA 3SEKC 2NU4I 2WGCA 2K9HA 2KMOA 2ELIA 1Y1CA 2V1CC 1CHOI 1K7TA 1XA6A 1WKXA 1TGSI 4MPIA 3PDNA 1X4SA 1HJAI 3TO9A 1LR9A 1P9ZA 3VE5A 1HPTA 1FAQA 1PPFI 2J87A 2DB6A 2GKTI 1SGNI 5CCMA 9WGAA 1HDLA 2DIPA 2N71A 1ULMA 1W4RA 2CJSC 3R5DA 2QQ0A 2RIJA 3B4VC 4A24A 1Z2IA 5HI7A 1MJBA 5EX0A 1LR7A 1TBQR 1Y8FA 1K7UA 2KMQA 1TBOA 5E3PA 2WVJA 5J8CA 3OXFA 3HH2C 1TURA 5FUVA 2CWFA 1SGEI 3TOBA 2GVIA 1R79A 3GOXA 1H0ZA 1CT2I 1TBRR 3UGLA 5FUXA 1CGII 3QWPA 1UVFA 1OVOA 1X74A 2J9RA 3OXLA
chains in the Genus database with same CATH topology
4UXIA 1SGRI 2UZ3A 2W0TA 4UXJA 2ARPF 1YTPA 2OD1A 4B6DA 1Y1BA 2QQEA 2ROWA 5DAEA 4UXHA 2YQPA 4FKDA 3UFFA 5JHWC 3D00A 1IW4A 1TBNA 1PTQA 1TUSA 2VRWB 2JYYA 1UVGA 2B8TA 2JXDA 1R0RI 1CT0I 1XX6A 2OVOA 3UEYA 1MT1A 1Z7KB 2E5RA 1SGDI 2ENNA 2NU0I 3TJQA 1XBTA 4E1RA 1BUSA 1LR8A 1SGYI 2N17A 2KCXA 3VDUA 1OMUA 1U5KA 2NU2I 2V53A 3SGQI 3VDPA 1UUCA 2FNFX 2JZMA 2N52A 2SGFI 1NUBA 1RFHA 2QQCA 2ODDA 5FUWA 3RU0A 1KMAA 1CT4I 2GKRI 5HQ8A 2QPOA 1YU6C 3E2IA 4GI3C 1SGPI 2ORVA 3KY9A 1IY5A 1TIHA 2SGDI 3BJIA 1M8CA 5EX3A 2B0UC 2LEOA 1V1IA 3OL0A 1VDDA 2SGQI 1PTRA 2WCYA 1IY6A 2JA1A 2SGPI 2XRCA 1AN1I 1OYVI 2L7XA 2QQDA 3OXGA 2N1AB 4L9MA 2KMPA 1DS3I 3OVOA 3CXLA 2L8EA 1V1HA 2SGEI 5FUYA 2BUSA 3QTLD 3SGBI 2JW6A 2YUUA 2M5XA 5CCLA 2A20A 2P6AC 1W3SA 2ENZA 3FC3A 1FYBA 2F3CI 4JCVE 2E73A 1KBFA 2ORWA 2LUYA 1SGQI 1OMTA 1KBEA 1PCEA 2ERWA 4SGBI 4OVOA 3UGDA 1PJUA 1CGJI 1M8BA 2NU1I 1TOTA 1CSOI 1N13A 3MEKA 2V1CA 3UEJA 4E1PA 1DS2I 4HGUA 2KMRA 3UGIA 2GKVA 1BMOA 1CE3A 1FARA 3E59A 2NU3I 3SEKC 2NU4I 2K9HA 2KMOA 2ELIA 1Y1CA 2V1CC 1CHOI 1XA6A 1TGSI 3PDNA 1X4SA 1HJAI 3VE5A 1LR9A 1HPTA 1FAQA 1PPFI 2J87A 2DB6A 2GKTI 1SGNI 5CCMA 1HDLA 2DIPA 2N71A 1W4RA 2CJSC 2QQ0A 3B4VC 4A24A 5HI7A 5EX0A 1LR7A 1TBQR 1Y8FA 2KMQA 1TBOA 2WVJA 3OXFA 3HH2C 1TURA 5FUVA 1SGEI 1H0ZA 2GVIA 1R79A 3GOXA 1CT2I 1TBRR 3UGLA 5FUXA 1CGII 3QWPA 1UVFA 1OVOA 1X74A 2J9RA 3OXLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ELI A;  4UXI A;  1XA6 A;  2UZ3 A;  2QPO A;  3E2I A;  4UXJ A;  2ENZ A;  2ORV A;  3KY9 A;  4B6D A;  2QQE A;  2ROW A;  3UFF A;  4UXH A;  1FAQ A;  3BJI A;  4FKD A;  2E73 A;  2J87 A;  2DB6 A;  1TBN A;  1PTQ A;  2VRW B;  1KBF A;  2ORW A;  1PTR A;  1W4R A;  2B8T A;  2JA1 A;  1XX6 A;  2QQ0 A;  3UEY A;  1KBE A;  3UGD A;  1Y8F A;  2ENN A;  1TBO A;  1XBT A;  2WVJ A;  4L9M A;  2YUU A;  5FUV A;  3UEJ A;  2GVI A;  1R79 A;  3CXL A;  5FUY A;  2FNF X;  3UGL A;  5FUX A;  3UGI A;  1FAR A;  5FUW A;  1RFH A;  2J9R A; 
#chains in the Genus database with same CATH topology
 1WGC A;  4UXI A;  1SGR I;  2UZ3 A;  2W0T A;  1ULK A;  2DKV A;  4UXJ A;  2ARP F;  1YTP A;  2OD1 A;  4B6D A;  1Y1B A;  1WGT A;  2QQE A;  1ULN A;  2ROW A;  2YQP A;  4FKD A;  4UXH A;  5DAE A;  3D00 A;  3UFF A;  1TBN A;  5JHW C;  1PTQ A;  1TUS A;  2VRW B;  2JYY A;  1UVG A;  2B8T A;  2JXD A;  1R0R I;  1CT0 I;  1XX6 A;  2OVO A;  3UEY A;  1MT1 A;  1Z7K B;  2E5R A;  5E3R A;  1SGD I;  1P9G A;  2ENN A;  2NU0 I;  3TJQ A;  1XBT A;  4E1R A;  1HEV A;  1BUS A;  2OZU A;  1LR8 A;  1SGY I;  2N17 A;  2KCX A;  3VDU A;  7WGA A;  1OMU A;  1U5K A;  2LB7 A;  1K7V A;  2NU2 I;  1Q9B A;  2V53 A;  1UUC A;  2X52 A;  3SGQ I;  3VDP A;  2FNF X;  2JZM A;  2X3T A;  4DNC A;  2N52 A;  2SGF I;  1NUB A;  1RFH A;  2QQC A;  2ODD A;  2Y0M A;  5FUW A;  2CWG A;  1CT4 I;  3RU0 A;  1KMA A;  2GKR I;  5HQ8 A;  2QPO A;  1YU6 C;  3E2I A;  4GI3 C;  1SGP I;  2ORV A;  2RC4 A;  3TO7 A;  4WP4 A;  3KY9 A;  1IY5 A;  1TIH A;  2GIV A;  2SGD I;  3BJI A;  1M8C A;  3FSY A;  5EX3 A;  2B0U C;  2LEO A;  1V1I A;  1WTJ A;  1VDD A;  2SGQ I;  1PTR A;  3OL0 A;  3R5C A;  2WCY A;  1MJ9 A;  2JA1 A;  1IY6 A;  2SGP I;  2XRC A;  1AN1 I;  1OYV I;  3UOE A;  2OU2 A;  2UVO A;  2L7X A;  2QQD A;  3OXG A;  1IW4 A;  2N1A B;  4L9M A;  2KMP A;  1DS3 I;  3OVO A;  3CXL A;  2L8E A;  1V1H A;  2SGE I;  5FUY A;  3R5A A;  2BUS A;  3QTL D;  3SGB I;  2JW6 A;  2YUU A;  5E3Q A;  2M5X A;  5CCL A;  2A20 A;  2P6A C;  3TOA A;  1S20 A;  1W3S A;  2ENZ A;  3FC3 A;  3QAH A;  1FYB A;  1UHA A;  2F3C I;  4JCV E;  2E73 A;  1MJA A;  1KBF A;  2ORW A;  2LUY A;  1SGQ I;  1NXU A;  1OMT A;  1KBE A;  1PCE A;  2ERW A;  1FY7 A;  2PQ8 A;  3R5B A;  4OVO A;  4SGB I;  3UGD A;  1PJU A;  1CGJ I;  1M8B A;  2NU1 I;  1TOT A;  2CWH A;  1CSO I;  1N13 A;  3MEK A;  2V1C A;  3UEJ A;  4E1P A;  1DS2 I;  3FSX A;  3TO6 A;  4HGU A;  2KMR A;  5J8F A;  3UGI A;  2GKV A;  1BMO A;  1CE3 A;  1FAR A;  3E59 A;  2NU3 I;  4AML A;  3SEK C;  2NU4 I;  2WGC A;  2K9H A;  2KMO A;  2ELI A;  1Y1C A;  2V1C C;  1CHO I;  1K7T A;  1XA6 A;  1WKX A;  1TGS I;  4MPI A;  3PDN A;  1X4S A;  1HJA I;  3TO9 A;  1LR9 A;  1P9Z A;  3VE5 A;  1HPT A;  1FAQ A;  1PPF I;  2J87 A;  2DB6 A;  2GKT I;  1SGN I;  5CCM A;  9WGA A;  1HDL A;  2DIP A;  2N71 A;  1ULM A;  1W4R A;  2CJS C;  3R5D A;  2QQ0 A;  2RIJ A;  3B4V C;  4A24 A;  1Z2I A;  5HI7 A;  1MJB A;  5EX0 A;  1LR7 A;  1TBQ R;  1Y8F A;  1K7U A;  2KMQ A;  1TBO A;  5E3P A;  2WVJ A;  5J8C A;  3OXF A;  3HH2 C;  1TUR A;  5FUV A;  2CWF A;  1SGE I;  3TOB A;  2GVI A;  1R79 A;  3GOX A;  1H0Z A;  1CT2 I;  1TBR R;  3UGL A;  5FUX A;  1CGI I;  3QWP A;  1UVF A;  1OVO A;  1X74 A;  2J9R A;  3OXL A; 
#chains in the Genus database with same CATH homology
 4UXI A;  1SGR I;  2UZ3 A;  2W0T A;  4UXJ A;  2ARP F;  1YTP A;  2OD1 A;  4B6D A;  1Y1B A;  2QQE A;  2ROW A;  5DAE A;  4UXH A;  2YQP A;  4FKD A;  3UFF A;  5JHW C;  3D00 A;  1IW4 A;  1TBN A;  1PTQ A;  1TUS A;  2VRW B;  2JYY A;  1UVG A;  2B8T A;  2JXD A;  1R0R I;  1CT0 I;  1XX6 A;  2OVO A;  3UEY A;  1MT1 A;  1Z7K B;  2E5R A;  1SGD I;  2ENN A;  2NU0 I;  3TJQ A;  1XBT A;  4E1R A;  1BUS A;  1LR8 A;  1SGY I;  2N17 A;  2KCX A;  3VDU A;  1OMU A;  1U5K A;  2NU2 I;  2V53 A;  3SGQ I;  3VDP A;  1UUC A;  2FNF X;  2JZM A;  2N52 A;  2SGF I;  1NUB A;  1RFH A;  2QQC A;  2ODD A;  5FUW A;  3RU0 A;  1KMA A;  1CT4 I;  2GKR I;  5HQ8 A;  2QPO A;  1YU6 C;  3E2I A;  4GI3 C;  1SGP I;  2ORV A;  3KY9 A;  1IY5 A;  1TIH A;  2SGD I;  3BJI A;  1M8C A;  5EX3 A;  2B0U C;  2LEO A;  1V1I A;  3OL0 A;  1VDD A;  2SGQ I;  1PTR A;  2WCY A;  1IY6 A;  2JA1 A;  2SGP I;  2XRC A;  1AN1 I;  1OYV I;  2L7X A;  2QQD A;  3OXG A;  2N1A B;  4L9M A;  2KMP A;  1DS3 I;  3OVO A;  3CXL A;  2L8E A;  1V1H A;  2SGE I;  5FUY A;  2BUS A;  3QTL D;  3SGB I;  2JW6 A;  2YUU A;  2M5X A;  5CCL A;  2A20 A;  2P6A C;  1W3S A;  2ENZ A;  3FC3 A;  1FYB A;  2F3C I;  4JCV E;  2E73 A;  1KBF A;  2ORW A;  2LUY A;  1SGQ I;  1OMT A;  1KBE A;  1PCE A;  2ERW A;  4SGB I;  4OVO A;  3UGD A;  1PJU A;  1CGJ I;  1M8B A;  2NU1 I;  1TOT A;  1CSO I;  1N13 A;  3MEK A;  2V1C A;  3UEJ A;  4E1P A;  1DS2 I;  4HGU A;  2KMR A;  3UGI A;  2GKV A;  1BMO A;  1CE3 A;  1FAR A;  3E59 A;  2NU3 I;  3SEK C;  2NU4 I;  2K9H A;  2KMO A;  2ELI A;  1Y1C A;  2V1C C;  1CHO I;  1XA6 A;  1TGS I;  3PDN A;  1X4S A;  1HJA I;  3VE5 A;  1LR9 A;  1HPT A;  1FAQ A;  1PPF I;  2J87 A;  2DB6 A;  2GKT I;  1SGN I;  5CCM A;  1HDL A;  2DIP A;  2N71 A;  1W4R A;  2CJS C;  2QQ0 A;  3B4V C;  4A24 A;  5HI7 A;  5EX0 A;  1LR7 A;  1TBQ R;  1Y8F A;  2KMQ A;  1TBO A;  2WVJ A;  3OXF A;  3HH2 C;  1TUR A;  5FUV A;  1SGE I;  1H0Z A;  2GVI A;  1R79 A;  3GOX A;  1CT2 I;  1TBR R;  3UGL A;  5FUX A;  1CGI I;  3QWP A;  1UVF A;  1OVO A;  1X74 A;  2J9R A;  3OXL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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