1FARA

Raf-1 cysteine rich domain, nmr, minimized average structure
Total Genus 2
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
2
sequence length
52
structure length
52
Chain Sequence
LTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Serine/threonine protein kinase
molecule keywords RAF-1
publication title The solution structure of the Raf-1 cysteine-rich domain: a novel ras and phospholipid binding site.
pubmed doi rcsb
source organism Homo sapiens
total genus 2
structure length 52
sequence length 52
ec nomenclature ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date 1996-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00130 C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1farA00
1KBEA 5FUWA 2ORWA 5FUYA 2QQ0A 2ENZA 3UGLA 2E73A 2QPOA 1Y8FA 2JA1A 3CXLA 2WVJA 3KY9A 3UGDA 5FUXA 1KBFA 2GVIA 1PTRA 1XA6A 3UEYA 4L9MA 2ELIA 1PTQA 2ORVA 3UEJA 1TBOA 1W4RA 2B8TA 2YUUA 2J9RA 2UZ3A 4FKDA 1XX6A 2DB6A 2FNFX 2QQEA 1FAQA 2ROWA 2VRWB 4UXJA 4B6DA 1TBNA 4UXHA 1XBTA 3E2IA 1R79A 4UXIA 1FARA 5FUVA 3UFFA 1RFHA 2J87A 2ENNA 3BJIA 3UGIA
chains in the Genus database with same CATH superfamily
5FUWA 3R5AA 3UGLA 2UVOA 2QPOA 1K7TA 1TBRR 4WP4A 1K7UA 1R0RI 4OVOA 2X52A 2JA1A 5E3PA 2NU4I 5EX0A 2WVJA 4AMLA 4HGUA 3R5DA 1MJ9A 4GI3C 1UVFA 3OVOA 3R5BA 3TO7A 1SGEI 2NU3I 3PDNA 1TURA 4JCVE 2QQCA 2GIVA 1TOTA 1M8CA 1IY5A 2QQDA 1NXUA 1LR7A 4FKDA 1CT4I 2J9RA 1CSOI 5E3QA 1HEVA 1W3SA 2N17A 1Z7KB 5CCLA 2V53A 2ERWA 2KMPA 3TO9A 1V1HA 1IW4A 3UFFA 1LR9A 1HJAI 5HI7A 1IY6A 2DIPA 2B0UC 2N52A 2ORWA 2KCXA 3FSXA 1P9ZA 1SGPI 1WTJA 2E73A 5HQ8A 2OZUA 2KMQA 1TBQR 2GVIA 2A20A 3FC3A 2GKTI 5CCMA 4L9MA 3TO6A 1OMTA 2ORVA 1S20A 5EX3A 1X4SA 2W0TA 2B8TA 1CT2I 2CWFA 1SGQI 2YQPA 2FNFX 2QQEA 1AN1I 2ROWA 2SGEI 3GOXA 4B6DA 1Q9BA 2L8EA 2P6AC 2WGCA 4UXHA 2OVOA 2BUSA 1R79A 1V1IA 2M5XA 3HH2C 2JYYA 1Y1BA 3QTLD 5FUVA 3MEKA 1NUBA 2L7XA 3VE5A 2SGDI 1Z2IA 3VDPA 2J87A 1SGRI 2ENNA 1UVGA 3BJIA 1SGDI 2LB7A 1TGSI 5FUYA 1PPFI 1KMAA 2NU0I 1MT1A 1TUSA 3FSYA 2CWHA 1PJUA 1Y8FA 1DS2I 3UGDA 2JW6A 3KY9A 1N13A 5FUXA 1H0ZA 1YTPA 5JHWC 1UUCA 1BUSA 2LUYA 3R5CA 4MPIA 2SGFI 1HDLA 2PQ8A 3QWPA 1PTQA 2YUUA 2CWGA 7WGAA 1U5KA 1XX6A 2DB6A 1CT0I 2N71A 4E1PA 4E1RA 1CE3A 1YU6C 1K7VA 2CJSC 2JXDA 2VRWB 1FAQA 1X74A 1MJBA 1FARA 1FY7A 2RC4A 1M8BA 5DAEA 3B4VC 2GKRI 2KMRA 5E3RA 9WGAA 2ARPF 1FYBA 1RFHA 1PCEA 2N1AB 2E5RA 1UHAA 2JZMA 3OXLA 1KBEA 2OU2A 2SGPI 2GKVA 2QQ0A 2ENZA 2WCYA 3SGQI 1SGYI 2V1CC 1ULNA 1BMOA 1DS3I 1ULKA 3CXLA 3E59A 3UOEA 3TOBA 1MJAA 3VDUA 4DNCA 2SGQI 1KBFA 1WGCA 2ODDA 1PTRA 1XA6A 2K9HA 2V1CA 3SGBI 3UEYA 3OL0A 1LR8A 1OVOA 1ULMA 2DKVA 2KMOA 2ELIA 1TIHA 1HPTA 3UEJA 1WKXA 2NU1I 1TBOA 1SGNI 1W4RA 1OMUA 1VDDA 2UZ3A 2X3TA 3OXGA 4A24A 5J8FA 2F3CI 3QAHA 1CHOI 4SGBI 5J8CA 2Y0MA 3TJQA 4UXJA 3TOAA 1TBNA 3SEKC 1Y1CA 1XBTA 1CGII 2RIJA 3E2IA 4UXIA 3RU0A 3D00A 2NU2I 2OD1A 2LEOA 3OXFA 1OYVI 1P9GA 2XRCA 1WGTA 1CGJI 3UGIA
chains in the Genus database with same CATH topology
5FUWA 3UGLA 2QPOA 1TBRR 1R0RI 4OVOA 2JA1A 5EX0A 2NU4I 2WVJA 4HGUA 4GI3C 1UVFA 3OVOA 1SGEI 2NU3I 3PDNA 1TURA 4JCVE 2QQCA 1TOTA 1M8CA 1IY5A 2QQDA 1LR7A 4FKDA 1CT4I 2J9RA 1CSOI 1W3SA 2N17A 1Z7KB 5CCLA 2V53A 2ERWA 2KMPA 1V1HA 1IW4A 3UFFA 1LR9A 1HJAI 5HI7A 1IY6A 2DIPA 2B0UC 2N52A 2ORWA 2KCXA 2E73A 1SGPI 5HQ8A 2KMQA 1TBQR 2GVIA 2A20A 3FC3A 2GKTI 5CCMA 4L9MA 1OMTA 2ORVA 5EX3A 1X4SA 2W0TA 2B8TA 1CT2I 2YQPA 1SGQI 2FNFX 2QQEA 1AN1I 2ROWA 2SGEI 3GOXA 4B6DA 2L8EA 2P6AC 4UXHA 2OVOA 2BUSA 1R79A 1V1IA 2M5XA 3HH2C 2JYYA 1Y1BA 3QTLD 5FUVA 3MEKA 1NUBA 2L7XA 3VE5A 2SGDI 3VDPA 2J87A 1SGRI 2ENNA 1UVGA 3BJIA 1SGDI 1TGSI 5FUYA 1PPFI 1KMAA 2NU0I 1MT1A 1TUSA 1PJUA 1Y8FA 1DS2I 3UGDA 2JW6A 3KY9A 1N13A 5FUXA 1H0ZA 1YTPA 5JHWC 1UUCA 1BUSA 2LUYA 1HDLA 2SGFI 3QWPA 1PTQA 2YUUA 1U5KA 1XX6A 2DB6A 1CT0I 2N71A 4E1PA 4E1RA 1CE3A 1YU6C 2CJSC 2VRWB 2JXDA 1FAQA 1X74A 1FARA 5DAEA 1M8BA 3B4VC 2GKRI 2KMRA 1FYBA 2ARPF 1RFHA 1PCEA 2N1AB 2E5RA 2JZMA 3OXLA 1KBEA 2SGPI 2WCYA 2GKVA 2QQ0A 2ENZA 3SGQI 1SGYI 2V1CC 1BMOA 1DS3I 3CXLA 3E59A 3VDUA 2SGQI 1KBFA 2V1CA 2ODDA 1PTRA 1XA6A 2K9HA 3SGBI 3UEYA 4A24A 3OL0A 1LR8A 1OVOA 2KMOA 2ELIA 1TIHA 1HPTA 3UEJA 2NU1I 1TBOA 1SGNI 1W4RA 1OMUA 1VDDA 2UZ3A 3OXGA 2F3CI 1CHOI 4SGBI 3TJQA 4UXJA 1TBNA 3SEKC 1Y1CA 1XBTA 1CGII 3E2IA 3RU0A 4UXIA 3D00A 2NU2I 2OD1A 2LEOA 3OXFA 1OYVI 2XRCA 1CGJI 3UGIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KBE A;  5FUW A;  2ORW A;  5FUY A;  2QQ0 A;  2ENZ A;  3UGL A;  2E73 A;  2QPO A;  1Y8F A;  2JA1 A;  3CXL A;  2WVJ A;  3KY9 A;  3UGD A;  5FUX A;  1KBF A;  2GVI A;  1PTR A;  1XA6 A;  3UEY A;  4L9M A;  2ELI A;  1PTQ A;  2ORV A;  3UEJ A;  1TBO A;  1W4R A;  2B8T A;  2YUU A;  2J9R A;  2UZ3 A;  4FKD A;  1XX6 A;  2DB6 A;  2FNF X;  2QQE A;  1FAQ A;  2ROW A;  2VRW B;  4UXJ A;  4B6D A;  1TBN A;  4UXH A;  1XBT A;  3E2I A;  1R79 A;  4UXI A;  1FAR A;  5FUV A;  3UFF A;  1RFH A;  2J87 A;  2ENN A;  3BJI A;  3UGI A; 
#chains in the Genus database with same CATH topology
 5FUW A;  3R5A A;  3UGL A;  2UVO A;  2QPO A;  1K7T A;  1TBR R;  4WP4 A;  1K7U A;  1R0R I;  4OVO A;  2X52 A;  2JA1 A;  5E3P A;  2NU4 I;  5EX0 A;  2WVJ A;  4AML A;  4HGU A;  3R5D A;  1MJ9 A;  4GI3 C;  1UVF A;  3OVO A;  3R5B A;  3TO7 A;  1SGE I;  2NU3 I;  3PDN A;  1TUR A;  4JCV E;  2QQC A;  2GIV A;  1TOT A;  1M8C A;  1IY5 A;  2QQD A;  1NXU A;  1LR7 A;  4FKD A;  1CT4 I;  2J9R A;  1CSO I;  5E3Q A;  1HEV A;  1W3S A;  2N17 A;  1Z7K B;  5CCL A;  2V53 A;  2ERW A;  2KMP A;  3TO9 A;  1V1H A;  1IW4 A;  3UFF A;  1LR9 A;  1HJA I;  5HI7 A;  1IY6 A;  2DIP A;  2B0U C;  2N52 A;  2ORW A;  2KCX A;  3FSX A;  1P9Z A;  1SGP I;  1WTJ A;  2E73 A;  5HQ8 A;  2OZU A;  2KMQ A;  1TBQ R;  2GVI A;  2A20 A;  3FC3 A;  2GKT I;  5CCM A;  4L9M A;  3TO6 A;  1OMT A;  2ORV A;  1S20 A;  5EX3 A;  1X4S A;  2W0T A;  2B8T A;  1CT2 I;  2CWF A;  1SGQ I;  2YQP A;  2FNF X;  2QQE A;  1AN1 I;  2ROW A;  2SGE I;  3GOX A;  4B6D A;  1Q9B A;  2L8E A;  2P6A C;  2WGC A;  4UXH A;  2OVO A;  2BUS A;  1R79 A;  1V1I A;  2M5X A;  3HH2 C;  2JYY A;  1Y1B A;  3QTL D;  5FUV A;  3MEK A;  1NUB A;  2L7X A;  3VE5 A;  2SGD I;  1Z2I A;  3VDP A;  2J87 A;  1SGR I;  2ENN A;  1UVG A;  3BJI A;  1SGD I;  2LB7 A;  1TGS I;  5FUY A;  1PPF I;  1KMA A;  2NU0 I;  1MT1 A;  1TUS A;  3FSY A;  2CWH A;  1PJU A;  1Y8F A;  1DS2 I;  3UGD A;  2JW6 A;  3KY9 A;  1N13 A;  5FUX A;  1H0Z A;  1YTP A;  5JHW C;  1UUC A;  1BUS A;  2LUY A;  3R5C A;  4MPI A;  2SGF I;  1HDL A;  2PQ8 A;  3QWP A;  1PTQ A;  2YUU A;  2CWG A;  7WGA A;  1U5K A;  1XX6 A;  2DB6 A;  1CT0 I;  2N71 A;  4E1P A;  4E1R A;  1CE3 A;  1YU6 C;  1K7V A;  2CJS C;  2JXD A;  2VRW B;  1FAQ A;  1X74 A;  1MJB A;  1FAR A;  1FY7 A;  2RC4 A;  1M8B A;  5DAE A;  3B4V C;  2GKR I;  2KMR A;  5E3R A;  9WGA A;  2ARP F;  1FYB A;  1RFH A;  1PCE A;  2N1A B;  2E5R A;  1UHA A;  2JZM A;  3OXL A;  1KBE A;  2OU2 A;  2SGP I;  2GKV A;  2QQ0 A;  2ENZ A;  2WCY A;  3SGQ I;  1SGY I;  2V1C C;  1ULN A;  1BMO A;  1DS3 I;  1ULK A;  3CXL A;  3E59 A;  3UOE A;  3TOB A;  1MJA A;  3VDU A;  4DNC A;  2SGQ I;  1KBF A;  1WGC A;  2ODD A;  1PTR A;  1XA6 A;  2K9H A;  2V1C A;  3SGB I;  3UEY A;  3OL0 A;  1LR8 A;  1OVO A;  1ULM A;  2DKV A;  2KMO A;  2ELI A;  1TIH A;  1HPT A;  3UEJ A;  1WKX A;  2NU1 I;  1TBO A;  1SGN I;  1W4R A;  1OMU A;  1VDD A;  2UZ3 A;  2X3T A;  3OXG A;  4A24 A;  5J8F A;  2F3C I;  3QAH A;  1CHO I;  4SGB I;  5J8C A;  2Y0M A;  3TJQ A;  4UXJ A;  3TOA A;  1TBN A;  3SEK C;  1Y1C A;  1XBT A;  1CGI I;  2RIJ A;  3E2I A;  4UXI A;  3RU0 A;  3D00 A;  2NU2 I;  2OD1 A;  2LEO A;  3OXF A;  1OYV I;  1P9G A;  2XRC A;  1WGT A;  1CGJ I;  3UGI A; 
#chains in the Genus database with same CATH homology
 5FUW A;  3UGL A;  2QPO A;  1TBR R;  1R0R I;  4OVO A;  2JA1 A;  5EX0 A;  2NU4 I;  2WVJ A;  4HGU A;  4GI3 C;  1UVF A;  3OVO A;  1SGE I;  2NU3 I;  3PDN A;  1TUR A;  4JCV E;  2QQC A;  1TOT A;  1M8C A;  1IY5 A;  2QQD A;  1LR7 A;  4FKD A;  1CT4 I;  2J9R A;  1CSO I;  1W3S A;  2N17 A;  1Z7K B;  5CCL A;  2V53 A;  2ERW A;  2KMP A;  1V1H A;  1IW4 A;  3UFF A;  1LR9 A;  1HJA I;  5HI7 A;  1IY6 A;  2DIP A;  2B0U C;  2N52 A;  2ORW A;  2KCX A;  2E73 A;  1SGP I;  5HQ8 A;  2KMQ A;  1TBQ R;  2GVI A;  2A20 A;  3FC3 A;  2GKT I;  5CCM A;  4L9M A;  1OMT A;  2ORV A;  5EX3 A;  1X4S A;  2W0T A;  2B8T A;  1CT2 I;  2YQP A;  1SGQ I;  2FNF X;  2QQE A;  1AN1 I;  2ROW A;  2SGE I;  3GOX A;  4B6D A;  2L8E A;  2P6A C;  4UXH A;  2OVO A;  2BUS A;  1R79 A;  1V1I A;  2M5X A;  3HH2 C;  2JYY A;  1Y1B A;  3QTL D;  5FUV A;  3MEK A;  1NUB A;  2L7X A;  3VE5 A;  2SGD I;  3VDP A;  2J87 A;  1SGR I;  2ENN A;  1UVG A;  3BJI A;  1SGD I;  1TGS I;  5FUY A;  1PPF I;  1KMA A;  2NU0 I;  1MT1 A;  1TUS A;  1PJU A;  1Y8F A;  1DS2 I;  3UGD A;  2JW6 A;  3KY9 A;  1N13 A;  5FUX A;  1H0Z A;  1YTP A;  5JHW C;  1UUC A;  1BUS A;  2LUY A;  1HDL A;  2SGF I;  3QWP A;  1PTQ A;  2YUU A;  1U5K A;  1XX6 A;  2DB6 A;  1CT0 I;  2N71 A;  4E1P A;  4E1R A;  1CE3 A;  1YU6 C;  2CJS C;  2VRW B;  2JXD A;  1FAQ A;  1X74 A;  1FAR A;  5DAE A;  1M8B A;  3B4V C;  2GKR I;  2KMR A;  1FYB A;  2ARP F;  1RFH A;  1PCE A;  2N1A B;  2E5R A;  2JZM A;  3OXL A;  1KBE A;  2SGP I;  2WCY A;  2GKV A;  2QQ0 A;  2ENZ A;  3SGQ I;  1SGY I;  2V1C C;  1BMO A;  1DS3 I;  3CXL A;  3E59 A;  3VDU A;  2SGQ I;  1KBF A;  2V1C A;  2ODD A;  1PTR A;  1XA6 A;  2K9H A;  3SGB I;  3UEY A;  4A24 A;  3OL0 A;  1LR8 A;  1OVO A;  2KMO A;  2ELI A;  1TIH A;  1HPT A;  3UEJ A;  2NU1 I;  1TBO A;  1SGN I;  1W4R A;  1OMU A;  1VDD A;  2UZ3 A;  3OXG A;  2F3C I;  1CHO I;  4SGB I;  3TJQ A;  4UXJ A;  1TBN A;  3SEK C;  1Y1C A;  1XBT A;  1CGI I;  3E2I A;  3RU0 A;  4UXI A;  3D00 A;  2NU2 I;  2OD1 A;  2LEO A;  3OXF A;  1OYV I;  2XRC A;  1CGJ I;  3UGI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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