1FLGA

Crystal structure of the quinoprotein ethanol dehydrogenase from pseudomonas aeruginosa
Total Genus 146
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
146
sequence length
582
structure length
582
Chain Sequence
KDVTWEDIANDDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPSW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords PROTEIN (QUINOPROTEIN ETHANOL DEHYDROGENASE)
publication title X-ray structure of the quinoprotein ethanol dehydrogenase from Pseudomonas aeruginosa: basis of substrate specificity.
pubmed doi rcsb
total genus 146
structure length 582
sequence length 582
chains with identical sequence B
ec nomenclature ec 1.1.2.8: Alcohol dehydrogenase (cytochrome c).
pdb deposition date 2000-08-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01011 PQQ PQQ enzyme repeat
A PF13360 PQQ_2 PQQ-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.140.10.10 Mainly Beta 8 Propeller Methanol Dehydrogenase; Chain A Quinoprotein alcohol dehydrogenase-like superfamily 1flgA00
1G72A 2D0VA 2AD7A 4AAHA 4CVCA 4MH1A 1LRWA 1KV9A 2AD6A 4CVBA 1H4IA 1H4JA 1KB0A 4MAEA 1FLGA 2AD8A 1W6SA 1YIQA 4TQOA
chains in the Genus database with same CATH superfamily
3G0DA 1G72A 3CCCA 1HZVA 2AD7A 2EEPA 2OAEA 5LLSA 2FJPA 1N50A 4MH1A 1KV9A 3G0CA 1NIRA 2AD6A 1AOQA 2OGZA 4FFWA 4LKOA 1BL9A 2AJBA 4PNZA 3O95A 5T4FA 2I03A 2D5LA 5T4HA 4MAEA 1DY7A 1N15A 1ORVA 4G1FA 1AOFA 1HJ5A 1FLGA 3SWWA 2I78A 3C45A 1X70A 1E2RA 3EIOA 3VJLA 3W2TA 1HJ4A 2I3ZA 3D4LA 1GQ1A 2D0VA 5ISMA 4AAHA 5KBYA 1XFDA 4CVCA 2IITA 1HCMA 1QKSA 1GJQA 1H9XA 4N8DA 2QTBA 1W1IA 2AJ8A 2QKYA 4DSZA 1NNOA 3G0BA 1TK3A 2BGNA 4QZVA 1J2EA 2JIDA 3F8SA 3CCBA 1H9YA 5J3JA 2BUAA 4Q1VA 1YIQA 2AJLI 2Z3ZA 4A5SA 1R9NA 3KWJA 1Z68A 3OPMA 2RGUA 2QJRA 2RIPA 2BGRA 2P8SA 2AJCA 2BUCA 3OC0A 5T4EA 2OQVA 1HJ3A 4DSAA 2DCMA 3HACA 4N8EA 2OPHA 3VJMA 2G63A 2IIVA 3Q0TA 2AJDA 1H4IA 1H4JA 3H0CA 4DTCA 1N90A 2ECFA 2Z3WA 4J3JA 2GBFA 2GBIA 1TKRA 3O9VA 3KWFA 2QT9A 1NU8A 2AD8A 1W6SA 2BUBA 3BJMA 5T4BA 3WQHA 3QBJA 3NOXA 4FFVA 1PFQA 3G0GA 2OLEA 2GBGA 5I7UA 1RWQA 2QOEA 2OAGA 1LRWA 3HABA 3Q8WA 1R9MA 4JH0A 1U8EA 2GBCA 4KR0A 4PV7A 2G5TA 4WJLA 4CVBA 1KB0A 4L72A 2G5PA 2HHAA 2OQIA 1NU6A 3SX4A 1HZUA 1ORWA 1AOMA 2ONCA 3C43A 1WCYA 4TQOA 3VJKA 1N1MA
chains in the Genus database with same CATH topology
1G72A 2D0VA 2AD7A 4AAHA 4CVCA 4MH1A 1LRWA 1KV9A 2AD6A 4CVBA 1H4IA 1H4JA 1KB0A 4MAEA 1FLGA 2AD8A 1W6SA 1YIQA 4TQOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1G72 A;  2D0V A;  2AD7 A;  4AAH A;  4CVC A;  4MH1 A;  1LRW A;  1KV9 A;  2AD6 A;  4CVB A;  1H4I A;  1H4J A;  1KB0 A;  4MAE A;  1FLG A;  2AD8 A;  1W6S A;  1YIQ A;  4TQO A; 
#chains in the Genus database with same CATH topology
 3G0D A;  1G72 A;  3CCC A;  1HZV A;  2AD7 A;  2EEP A;  2OAE A;  5LLS A;  2FJP A;  1N50 A;  4MH1 A;  1KV9 A;  3G0C A;  1NIR A;  2AD6 A;  1AOQ A;  2OGZ A;  4FFW A;  4LKO A;  1BL9 A;  2AJB A;  4PNZ A;  3O95 A;  5T4F A;  2I03 A;  2D5L A;  5T4H A;  4MAE A;  1DY7 A;  1N15 A;  1ORV A;  4G1F A;  1AOF A;  1HJ5 A;  1FLG A;  3SWW A;  2I78 A;  3C45 A;  1X70 A;  1E2R A;  3EIO A;  3VJL A;  3W2T A;  1HJ4 A;  2I3Z A;  3D4L A;  1GQ1 A;  2D0V A;  5ISM A;  4AAH A;  5KBY A;  1XFD A;  4CVC A;  2IIT A;  1HCM A;  1QKS A;  1GJQ A;  1H9X A;  4N8D A;  2QTB A;  1W1I A;  2AJ8 A;  2QKY A;  4DSZ A;  1NNO A;  3G0B A;  1TK3 A;  2BGN A;  4QZV A;  1J2E A;  2JID A;  3F8S A;  3CCB A;  1H9Y A;  5J3J A;  2BUA A;  4Q1V A;  1YIQ A;  2AJL I;  2Z3Z A;  4A5S A;  1R9N A;  3KWJ A;  1Z68 A;  3OPM A;  2RGU A;  2QJR A;  2RIP A;  2BGR A;  2P8S A;  2AJC A;  2BUC A;  3OC0 A;  5T4E A;  2OQV A;  1HJ3 A;  4DSA A;  2DCM A;  3HAC A;  4N8E A;  2OPH A;  3VJM A;  2G63 A;  2IIV A;  3Q0T A;  2AJD A;  1H4I A;  1H4J A;  3H0C A;  4DTC A;  1N90 A;  2ECF A;  2Z3W A;  4J3J A;  2GBF A;  2GBI A;  1TKR A;  3O9V A;  3KWF A;  2QT9 A;  1NU8 A;  2AD8 A;  1W6S A;  2BUB A;  3BJM A;  5T4B A;  3WQH A;  3QBJ A;  3NOX A;  4FFV A;  1PFQ A;  3G0G A;  2OLE A;  2GBG A;  5I7U A;  1RWQ A;  2QOE A;  2OAG A;  1LRW A;  3HAB A;  3Q8W A;  1R9M A;  4JH0 A;  1U8E A;  2GBC A;  4KR0 A;  4PV7 A;  2G5T A;  4WJL A;  4CVB A;  1KB0 A;  4L72 A;  2G5P A;  2HHA A;  2OQI A;  1NU6 A;  3SX4 A;  1HZU A;  1ORW A;  1AOM A;  2ONC A;  3C43 A;  1WCY A;  4TQO A;  3VJK A;  1N1M A; 
#chains in the Genus database with same CATH homology
 1G72 A;  2D0V A;  2AD7 A;  4AAH A;  4CVC A;  4MH1 A;  1LRW A;  1KV9 A;  2AD6 A;  4CVB A;  1H4I A;  1H4J A;  1KB0 A;  4MAE A;  1FLG A;  2AD8 A;  1W6S A;  1YIQ A;  4TQO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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