1FWEA

Klebsiella aerogenes urease, c319a variant with acetohydroxamic acid (aha) bound
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
100
structure length
100
Chain Sequence
MELTPREKDKLLLFTAALVAERRLARGLKLNYPESVALISAFIMEGARDGKSVASLMEEGRHVLTREQVMEGVPEMIPDIQVEATFPDGSKLVTVHNPII
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords UREASE
publication title Structures of Cys319 variants and acetohydroxamate-inhibited Klebsiella aerogenes urease.
pubmed doi rcsb
source organism Klebsiella aerogenes
total genus 29
structure length 100
sequence length 100
ec nomenclature ec 3.5.1.5: Urease.
pdb deposition date 1997-04-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00547 Urease_gamma Urease, gamma subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.280.10 Alpha Beta 2-Layer Sandwich Urease; subunit A Urease, gamma-like subunit 1fweA00
2KAUA 4H9MA 1KRAA 4FURA 1FWAA 1UBPA 1E9ZA 5G4HA 1A5NA 1FWEA 4AC7A 1KRCA 1FWFA 5FSEA 1A5MA 1EF2C 1EJSA 1KRBA 5A6TA 4GY7A 1EJRA 1EJTA 1EJUA 1FWIA 1S3TA 4GOAA 1A5KA 4CEXA 1A5OA 3QGAA 1EJWA 4EPDA 1EJXA 4UBPA 2FVHA 2UBPA 4EPEA 4G7EB 1FWHA 4EPBA 3UBPA 4CEUA 1FWJA 1FWBA 1FWGA 1IE7A 3QGKA 1EJVA 4Z42A 4EP8A 1E9YA 1A5LA 4G7EA 5FSDA 1FWDA 1FWCA 3LA4A
chains in the Genus database with same CATH superfamily
2KAUA 4H9MA 1KRAA 4FURA 1FWAA 1UBPA 1E9ZA 5G4HA 1A5NA 1FWEA 4AC7A 1KRCA 1FWFA 5FSEA 1A5MA 1EF2C 1EJSA 1KRBA 5A6TA 4GY7A 1EJRA 1EJTA 1EJUA 1FWIA 1S3TA 4GOAA 1A5KA 4CEXA 1A5OA 3QGAA 1EJWA 4EPDA 1EJXA 4UBPA 2FVHA 2UBPA 4EPEA 4G7EB 1FWHA 4EPBA 3UBPA 4CEUA 1FWJA 1FWBA 1FWGA 1IE7A 3QGKA 1EJVA 4Z42A 4EP8A 1E9YA 1A5LA 4G7EA 5FSDA 1FWDA 1FWCA 3LA4A
chains in the Genus database with same CATH topology
2KAUA 4H9MA 1KRAA 4FURA 1FWAA 1UBPA 1E9ZA 5G4HA 1A5NA 1FWEA 4AC7A 1KRCA 1FWFA 5FSEA 1A5MA 1EF2C 1EJSA 1KRBA 5A6TA 4GY7A 1EJRA 1EJTA 1EJUA 1FWIA 1S3TA 4GOAA 1A5KA 4CEXA 1A5OA 3QGAA 1EJWA 4EPDA 1EJXA 4UBPA 2FVHA 2UBPA 4EPEA 4G7EB 1FWHA 4EPBA 3UBPA 4CEUA 1FWJA 1FWBA 1FWGA 1IE7A 3QGKA 1EJVA 4Z42A 4EP8A 1E9YA 1A5LA 4G7EA 5FSDA 1FWDA 1FWCA 3LA4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KAU A;  4H9M A;  1KRA A;  4FUR A;  1FWA A;  1UBP A;  1E9Z A;  5G4H A;  1A5N A;  1FWE A;  4AC7 A;  1KRC A;  1FWF A;  5FSE A;  1A5M A;  1EF2 C;  1EJS A;  1KRB A;  5A6T A;  4GY7 A;  1EJR A;  1EJT A;  1EJU A;  1FWI A;  1S3T A;  4GOA A;  1A5K A;  4CEX A;  1A5O A;  3QGA A;  1EJW A;  4EPD A;  1EJX A;  4UBP A;  2FVH A;  2UBP A;  4EPE A;  4G7E B;  1FWH A;  4EPB A;  3UBP A;  4CEU A;  1FWJ A;  1FWB A;  1FWG A;  1IE7 A;  3QGK A;  1EJV A;  4Z42 A;  4EP8 A;  1E9Y A;  1A5L A;  4G7E A;  5FSD A;  1FWD A;  1FWC A;  3LA4 A; 
#chains in the Genus database with same CATH topology
 2KAU A;  4H9M A;  1KRA A;  4FUR A;  1FWA A;  1UBP A;  1E9Z A;  5G4H A;  1A5N A;  1FWE A;  4AC7 A;  1KRC A;  1FWF A;  5FSE A;  1A5M A;  1EF2 C;  1EJS A;  1KRB A;  5A6T A;  4GY7 A;  1EJR A;  1EJT A;  1EJU A;  1FWI A;  1S3T A;  4GOA A;  1A5K A;  4CEX A;  1A5O A;  3QGA A;  1EJW A;  4EPD A;  1EJX A;  4UBP A;  2FVH A;  2UBP A;  4EPE A;  4G7E B;  1FWH A;  4EPB A;  3UBP A;  4CEU A;  1FWJ A;  1FWB A;  1FWG A;  1IE7 A;  3QGK A;  1EJV A;  4Z42 A;  4EP8 A;  1E9Y A;  1A5L A;  4G7E A;  5FSD A;  1FWD A;  1FWC A;  3LA4 A; 
#chains in the Genus database with same CATH homology
 2KAU A;  4H9M A;  1KRA A;  4FUR A;  1FWA A;  1UBP A;  1E9Z A;  5G4H A;  1A5N A;  1FWE A;  4AC7 A;  1KRC A;  1FWF A;  5FSE A;  1A5M A;  1EF2 C;  1EJS A;  1KRB A;  5A6T A;  4GY7 A;  1EJR A;  1EJT A;  1EJU A;  1FWI A;  1S3T A;  4GOA A;  1A5K A;  4CEX A;  1A5O A;  3QGA A;  1EJW A;  4EPD A;  1EJX A;  4UBP A;  2FVH A;  2UBP A;  4EPE A;  4G7E B;  1FWH A;  4EPB A;  3UBP A;  4CEU A;  1FWJ A;  1FWB A;  1FWG A;  1IE7 A;  3QGK A;  1EJV A;  4Z42 A;  4EP8 A;  1E9Y A;  1A5L A;  4G7E A;  5FSD A;  1FWD A;  1FWC A;  3LA4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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