1FYBA

Solution structure of c1-t1, a two-domain proteinase inhibitor derived from the circular precursor protein na-propi from nicotiana alata
Total Genus 12
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
111
structure length
111
Chain Sequence
DRICTNCCAGTKGCKYFSDDGTFVCEGESDPRNPKACTLNCDPRIAYGVCPRSEEKKNDRICTNCCAGTKGCKYFSDDGTFVCEGESDPRNPKACPRNCDPRIAYGICPLA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase inhibitor
molecule keywords PROTEINASE INHIBITOR
publication title The solution structure of C1-T1, a two-domain proteinase inhibitor derived from a circular precursor protein from Nicotiana alata.
pubmed doi rcsb
source organism Nicotiana alata
total genus 12
structure length 111
sequence length 111
ec nomenclature
pdb deposition date 2000-09-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02428 Prot_inhib_II Potato type II proteinase inhibitor family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1fybA02
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1fybA01
1SGPI 1CT0I 2WCYA 1HJAI 2JZMA 1OYVI 2NU2I 2QQDA 2XRCA 1H0ZA 1CE3A 2B0UC 2GKVA 2N71A 3QTLD 2JYYA 1M8CA 1OMTA 5DAEA 1BUSA 1BMOA 1SGDI 4GI3C 2M5XA 2GKTI 1CT4I 2SGQI 4SGBI 1CSOI 2ERWA 1HPTA 2KMOA 2NU4I 1Z7KB 1OVOA 1YU6C 2KMPA 2JXDA 1TIHA 2N52A 3HH2C 2N17A 2KMQA 2SGEI 3SEKC 2QQCA 1CT2I 1SGEI 1OMUA 1UVGA 2V53A 1IY6A 1KMAA 1DS2I 2NU3I 1N13A 5JHWC 1LR7A 1PPFI 1UUCA 1HDLA 1TBQR 2P6AC 4OVOA 1UVFA 1LR9A 2KMRA 2SGPI 3TJQA 1CGJI 2F3CI 1CHOI 1NUBA 1Y1CA 1IY5A 1M8BA 1AN1I 1TGSI 2SGFI 3SGQI 1MT1A 1FYBA 4HGUA 2NU1I 1DS3I 1CGII 1SGQI 1TUSA 1Y1BA 1PCEA 1PJUA 3SGBI 2BUSA 2OVOA 1SGYI 2SGDI 3B4VC 1SGRI 2ARPF 1SGNI 1TBRR 1TURA 3OVOA 2KCXA 1IW4A 2LEOA 2NU0I 1LR8A 1YTPA 1R0RI 2GKRI
chains in the Genus database with same CATH superfamily
1ULMA 3OL0A 4JCVE 1SGPI 3FSYA 2W0TA 1WTJA 1CT0I 2WCYA 1HJAI 1V1IA 2N1AB 2JZMA 2CWFA 2LUYA 2YQPA 2ENZA 1OYVI 2DIPA 2NU2I 3E59A 4FKDA 2QQDA 2XRCA 5EX3A 3R5BA 1H0ZA 1NXUA 1CE3A 3UEYA 1WKXA 2B0UC 2GKVA 2N71A 5FUXA 2OZUA 3VE5A 2VRWB 3E2IA 3QTLD 4MPIA 4E1RA 2JYYA 1M8CA 1OMTA 5DAEA 1TOTA 1BMOA 1SGDI 5E3RA 3VDUA 1BUSA 4GI3C 2M5XA 2FNFX 2GKTI 4UXJA 1CT4I 4AMLA 1HEVA 2SGQI 4SGBI 1TBNA 1CSOI 2E73A 1HPTA 2ERWA 2LB7A 5FUVA 3UEJA 2QQEA 2PQ8A 3BJIA 3UOEA 1Q9BA 1MJAA 2KMOA 2NU4I 1VDDA 1Z7KB 1OVOA 1YU6C 3VDPA 2DKVA 2KMPA 5E3PA 2JXDA 1TIHA 2N52A 2RIJA 2N17A 3HH2C 2UVOA 2GIVA 2KMQA 2ODDA 2QPOA 2SGEI 3SEKC 3UFFA 1S20A 2QQCA 1CT2I 1SGEI 2L8EA 2X3TA 2E5RA 7WGAA 2X52A 1OMUA 5EX0A 3OXLA 3GOXA 3FSXA 1UVGA 1XX6A 2QQ0A 1K7UA 2ORWA 1PTRA 2V53A 1IY6A 1DS2I 3R5DA 1KMAA 5HQ8A 2A20A 1N13A 1ULNA 2NU3I 1W4RA 3D00A 5JHWC 3FC3A 1LR7A 1PPFI 1UHAA 1UUCA 1V1HA 3QWPA 2ORVA 3QAHA 2ELIA 1HDLA 2DB6A 1TBQR 1P9GA 2P6AC 2V1CC 4OVOA 1UVFA 1LR9A 2L7XA 5FUYA 9WGAA 2KMRA 1WGTA 2SGPI 2CWHA 3TOAA 3TO9A 3TJQA 1CGJI 2F3CI 1CHOI 1NUBA 1PTQA 1RFHA 1Y1CA 1MJ9A 5J8FA 1IY5A 5E3QA 1M8BA 2UZ3A 1AN1I 2ENNA 1Z2IA 1KBEA 2Y0MA 1FY7A 1K7TA 1TGSI 2SGFI 1MT1A 1R79A 3MEKA 3SGQI 2K9HA 2CWGA 2YUUA 3OXGA 1XBTA 5FUWA 4B6DA 1Y8FA 1FYBA 4HGUA 4WP4A 3RU0A 2NU1I 1DS3I 1CGII 2JA1A 1MJBA 3TO6A 2GVIA 1SGQI 5J8CA 3TO7A 3OXFA 2J9RA 1WGCA 1U5KA 1P9ZA 3R5CA 5CCMA 1TUSA 1Y1BA 2CJSC 1PCEA 2JW6A 3UGDA 1PJUA 4L9MA 3SGBI 4UXHA 2BUSA 3UGIA 1KBFA 1FAQA 4A24A 2B8TA 3CXLA 2J87A 2OVOA 1SGYI 1K7VA 1X74A 4E1PA 2SGDI 1FARA 3B4VC 4UXIA 1SGRI 3TOBA 2WGCA 1TBOA 1XA6A 2ARPF 2OU2A 1SGNI 1TBRR 1ULKA 5CCLA 1TURA 1W3SA 3OVOA 2RC4A 3PDNA 2KCXA 5HI7A 1IW4A 2LEOA 2NU0I 1X4SA 2WVJA 2ROWA 3UGLA 4DNCA 1LR8A 3R5AA 3KY9A 1YTPA 2OD1A 2V1CA 1R0RI 2GKRI
chains in the Genus database with same CATH topology
3OL0A 4JCVE 1SGPI 2W0TA 1CT0I 2WCYA 1HJAI 1V1IA 2N1AB 2JZMA 2LUYA 2YQPA 4FKDA 2ENZA 1OYVI 2DIPA 2NU2I 3E59A 2QQDA 2XRCA 5EX3A 1H0ZA 1CE3A 3UEYA 2B0UC 2GKVA 2N71A 5FUXA 3VE5A 2VRWB 3E2IA 3QTLD 4E1RA 2JYYA 1M8CA 1OMTA 5DAEA 1TOTA 1BMOA 1SGDI 3VDUA 1BUSA 4GI3C 2M5XA 2FNFX 2GKTI 4UXJA 1CT4I 2SGQI 4SGBI 1TBNA 1CSOI 2E73A 1HPTA 2ERWA 3UEJA 5FUVA 2QQEA 3BJIA 2KMOA 2NU4I 1VDDA 1Z7KB 1OVOA 1YU6C 3VDPA 2KMPA 2JXDA 1TIHA 2N52A 3HH2C 2N17A 2KMQA 2ODDA 2QPOA 2SGEI 3SEKC 3UFFA 2QQCA 1CT2I 1SGEI 2L8EA 2E5RA 1OMUA 5EX0A 3OXLA 3GOXA 1UVGA 1XX6A 2QQ0A 2ORWA 1PTRA 2V53A 1IY6A 1DS2I 1KMAA 5HQ8A 2A20A 1N13A 2NU3I 1W4RA 3D00A 5JHWC 3FC3A 1LR7A 1PPFI 1UUCA 1V1HA 3QWPA 2ORVA 2ELIA 1HDLA 2DB6A 1TBQR 2P6AC 2V1CC 4OVOA 1UVFA 1LR9A 2L7XA 5FUYA 2KMRA 2SGPI 3TJQA 1CGJI 2F3CI 1CHOI 1NUBA 1PTQA 1RFHA 1Y1CA 1IY5A 1M8BA 2UZ3A 1AN1I 2ENNA 1KBEA 1TGSI 2SGFI 3SGQI 1MT1A 1R79A 3MEKA 2K9HA 2YUUA 3OXGA 1XBTA 5FUWA 4B6DA 1Y8FA 1FYBA 4HGUA 3RU0A 2NU1I 1DS3I 1CGII 2JA1A 2GVIA 1SGQI 3OXFA 2J9RA 5CCMA 1U5KA 1TUSA 1Y1BA 2CJSC 1PCEA 2JW6A 3UGDA 1PJUA 4L9MA 3SGBI 4UXHA 2BUSA 3UGIA 1KBFA 1FAQA 4A24A 2B8TA 3CXLA 2J87A 2OVOA 1SGYI 1X74A 4E1PA 2SGDI 1FARA 3B4VC 4UXIA 1SGRI 1TBOA 1XA6A 2ARPF 1SGNI 1TBRR 5CCLA 1TURA 1W3SA 3OVOA 3PDNA 2KCXA 5HI7A 1IW4A 2LEOA 2NU0I 1X4SA 2WVJA 2ROWA 3UGLA 1LR8A 3KY9A 1YTPA 2OD1A 2V1CA 1R0RI 2GKRI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SGP I;  1CT0 I;  2WCY A;  1HJA I;  2JZM A;  1OYV I;  2NU2 I;  2QQD A;  2XRC A;  1H0Z A;  1CE3 A;  2B0U C;  2GKV A;  2N71 A;  3QTL D;  2JYY A;  1M8C A;  1OMT A;  5DAE A;  1BUS A;  1BMO A;  1SGD I;  4GI3 C;  2M5X A;  2GKT I;  1CT4 I;  2SGQ I;  4SGB I;  1CSO I;  2ERW A;  1HPT A;  2KMO A;  2NU4 I;  1Z7K B;  1OVO A;  1YU6 C;  2KMP A;  2JXD A;  1TIH A;  2N52 A;  3HH2 C;  2N17 A;  2KMQ A;  2SGE I;  3SEK C;  2QQC A;  1CT2 I;  1SGE I;  1OMU A;  1UVG A;  2V53 A;  1IY6 A;  1KMA A;  1DS2 I;  2NU3 I;  1N13 A;  5JHW C;  1LR7 A;  1PPF I;  1UUC A;  1HDL A;  1TBQ R;  2P6A C;  4OVO A;  1UVF A;  1LR9 A;  2KMR A;  2SGP I;  3TJQ A;  1CGJ I;  2F3C I;  1CHO I;  1NUB A;  1Y1C A;  1IY5 A;  1M8B A;  1AN1 I;  1TGS I;  2SGF I;  3SGQ I;  1MT1 A;  1FYB A;  4HGU A;  2NU1 I;  1DS3 I;  1CGI I;  1SGQ I;  1TUS A;  1Y1B A;  1PCE A;  1PJU A;  3SGB I;  2BUS A;  2OVO A;  1SGY I;  2SGD I;  3B4V C;  1SGR I;  2ARP F;  1SGN I;  1TBR R;  1TUR A;  3OVO A;  2KCX A;  1IW4 A;  2LEO A;  2NU0 I;  1LR8 A;  1YTP A;  1R0R I;  2GKR I; 
#chains in the Genus database with same CATH topology
 1ULM A;  3OL0 A;  4JCV E;  1SGP I;  3FSY A;  2W0T A;  1WTJ A;  1CT0 I;  2WCY A;  1HJA I;  1V1I A;  2N1A B;  2JZM A;  2CWF A;  2LUY A;  2YQP A;  2ENZ A;  1OYV I;  2DIP A;  2NU2 I;  3E59 A;  4FKD A;  2QQD A;  2XRC A;  5EX3 A;  3R5B A;  1H0Z A;  1NXU A;  1CE3 A;  3UEY A;  1WKX A;  2B0U C;  2GKV A;  2N71 A;  5FUX A;  2OZU A;  3VE5 A;  2VRW B;  3E2I A;  3QTL D;  4MPI A;  4E1R A;  2JYY A;  1M8C A;  1OMT A;  5DAE A;  1TOT A;  1BMO A;  1SGD I;  5E3R A;  3VDU A;  1BUS A;  4GI3 C;  2M5X A;  2FNF X;  2GKT I;  4UXJ A;  1CT4 I;  4AML A;  1HEV A;  2SGQ I;  4SGB I;  1TBN A;  1CSO I;  2E73 A;  1HPT A;  2ERW A;  2LB7 A;  5FUV A;  3UEJ A;  2QQE A;  2PQ8 A;  3BJI A;  3UOE A;  1Q9B A;  1MJA A;  2KMO A;  2NU4 I;  1VDD A;  1Z7K B;  1OVO A;  1YU6 C;  3VDP A;  2DKV A;  2KMP A;  5E3P A;  2JXD A;  1TIH A;  2N52 A;  2RIJ A;  2N17 A;  3HH2 C;  2UVO A;  2GIV A;  2KMQ A;  2ODD A;  2QPO A;  2SGE I;  3SEK C;  3UFF A;  1S20 A;  2QQC A;  1CT2 I;  1SGE I;  2L8E A;  2X3T A;  2E5R A;  7WGA A;  2X52 A;  1OMU A;  5EX0 A;  3OXL A;  3GOX A;  3FSX A;  1UVG A;  1XX6 A;  2QQ0 A;  1K7U A;  2ORW A;  1PTR A;  2V53 A;  1IY6 A;  1DS2 I;  3R5D A;  1KMA A;  5HQ8 A;  2A20 A;  1N13 A;  1ULN A;  2NU3 I;  1W4R A;  3D00 A;  5JHW C;  3FC3 A;  1LR7 A;  1PPF I;  1UHA A;  1UUC A;  1V1H A;  3QWP A;  2ORV A;  3QAH A;  2ELI A;  1HDL A;  2DB6 A;  1TBQ R;  1P9G A;  2P6A C;  2V1C C;  4OVO A;  1UVF A;  1LR9 A;  2L7X A;  5FUY A;  9WGA A;  2KMR A;  1WGT A;  2SGP I;  2CWH A;  3TOA A;  3TO9 A;  3TJQ A;  1CGJ I;  2F3C I;  1CHO I;  1NUB A;  1PTQ A;  1RFH A;  1Y1C A;  1MJ9 A;  5J8F A;  1IY5 A;  5E3Q A;  1M8B A;  2UZ3 A;  1AN1 I;  2ENN A;  1Z2I A;  1KBE A;  2Y0M A;  1FY7 A;  1K7T A;  1TGS I;  2SGF I;  1MT1 A;  1R79 A;  3MEK A;  3SGQ I;  2K9H A;  2CWG A;  2YUU A;  3OXG A;  1XBT A;  5FUW A;  4B6D A;  1Y8F A;  1FYB A;  4HGU A;  4WP4 A;  3RU0 A;  2NU1 I;  1DS3 I;  1CGI I;  2JA1 A;  1MJB A;  3TO6 A;  2GVI A;  1SGQ I;  5J8C A;  3TO7 A;  3OXF A;  2J9R A;  1WGC A;  1U5K A;  1P9Z A;  3R5C A;  5CCM A;  1TUS A;  1Y1B A;  2CJS C;  1PCE A;  2JW6 A;  3UGD A;  1PJU A;  4L9M A;  3SGB I;  4UXH A;  2BUS A;  3UGI A;  1KBF A;  1FAQ A;  4A24 A;  2B8T A;  3CXL A;  2J87 A;  2OVO A;  1SGY I;  1K7V A;  1X74 A;  4E1P A;  2SGD I;  1FAR A;  3B4V C;  4UXI A;  1SGR I;  3TOB A;  2WGC A;  1TBO A;  1XA6 A;  2ARP F;  2OU2 A;  1SGN I;  1TBR R;  1ULK A;  5CCL A;  1TUR A;  1W3S A;  3OVO A;  2RC4 A;  3PDN A;  2KCX A;  5HI7 A;  1IW4 A;  2LEO A;  2NU0 I;  1X4S A;  2WVJ A;  2ROW A;  3UGL A;  4DNC A;  1LR8 A;  3R5A A;  3KY9 A;  1YTP A;  2OD1 A;  2V1C A;  1R0R I;  2GKR I; 
#chains in the Genus database with same CATH homology
 3OL0 A;  4JCV E;  1SGP I;  2W0T A;  1CT0 I;  2WCY A;  1HJA I;  1V1I A;  2N1A B;  2JZM A;  2LUY A;  2YQP A;  4FKD A;  2ENZ A;  1OYV I;  2DIP A;  2NU2 I;  3E59 A;  2QQD A;  2XRC A;  5EX3 A;  1H0Z A;  1CE3 A;  3UEY A;  2B0U C;  2GKV A;  2N71 A;  5FUX A;  3VE5 A;  2VRW B;  3E2I A;  3QTL D;  4E1R A;  2JYY A;  1M8C A;  1OMT A;  5DAE A;  1TOT A;  1BMO A;  1SGD I;  3VDU A;  1BUS A;  4GI3 C;  2M5X A;  2FNF X;  2GKT I;  4UXJ A;  1CT4 I;  2SGQ I;  4SGB I;  1TBN A;  1CSO I;  2E73 A;  1HPT A;  2ERW A;  3UEJ A;  5FUV A;  2QQE A;  3BJI A;  2KMO A;  2NU4 I;  1VDD A;  1Z7K B;  1OVO A;  1YU6 C;  3VDP A;  2KMP A;  2JXD A;  1TIH A;  2N52 A;  3HH2 C;  2N17 A;  2KMQ A;  2ODD A;  2QPO A;  2SGE I;  3SEK C;  3UFF A;  2QQC A;  1CT2 I;  1SGE I;  2L8E A;  2E5R A;  1OMU A;  5EX0 A;  3OXL A;  3GOX A;  1UVG A;  1XX6 A;  2QQ0 A;  2ORW A;  1PTR A;  2V53 A;  1IY6 A;  1DS2 I;  1KMA A;  5HQ8 A;  2A20 A;  1N13 A;  2NU3 I;  1W4R A;  3D00 A;  5JHW C;  3FC3 A;  1LR7 A;  1PPF I;  1UUC A;  1V1H A;  3QWP A;  2ORV A;  2ELI A;  1HDL A;  2DB6 A;  1TBQ R;  2P6A C;  2V1C C;  4OVO A;  1UVF A;  1LR9 A;  2L7X A;  5FUY A;  2KMR A;  2SGP I;  3TJQ A;  1CGJ I;  2F3C I;  1CHO I;  1NUB A;  1PTQ A;  1RFH A;  1Y1C A;  1IY5 A;  1M8B A;  2UZ3 A;  1AN1 I;  2ENN A;  1KBE A;  1TGS I;  2SGF I;  3SGQ I;  1MT1 A;  1R79 A;  3MEK A;  2K9H A;  2YUU A;  3OXG A;  1XBT A;  5FUW A;  4B6D A;  1Y8F A;  1FYB A;  4HGU A;  3RU0 A;  2NU1 I;  1DS3 I;  1CGI I;  2JA1 A;  2GVI A;  1SGQ I;  3OXF A;  2J9R A;  5CCM A;  1U5K A;  1TUS A;  1Y1B A;  2CJS C;  1PCE A;  2JW6 A;  3UGD A;  1PJU A;  4L9M A;  3SGB I;  4UXH A;  2BUS A;  3UGI A;  1KBF A;  1FAQ A;  4A24 A;  2B8T A;  3CXL A;  2J87 A;  2OVO A;  1SGY I;  1X74 A;  4E1P A;  2SGD I;  1FAR A;  3B4V C;  4UXI A;  1SGR I;  1TBO A;  1XA6 A;  2ARP F;  1SGN I;  1TBR R;  5CCL A;  1TUR A;  1W3S A;  3OVO A;  3PDN A;  2KCX A;  5HI7 A;  1IW4 A;  2LEO A;  2NU0 I;  1X4S A;  2WVJ A;  2ROW A;  3UGL A;  1LR8 A;  3KY9 A;  1YTP A;  2OD1 A;  2V1C A;  1R0R I;  2GKR I; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...