1FZ8E

Methane monooxygenase hydroxylase, form ii cocrystallized with dibromomethane
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
167
structure length
167
Chain Sequence
KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQSP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
publication title Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase.
pubmed doi rcsb
molecule keywords METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN
total genus 61
structure length 167
sequence length 167
chains with identical sequence F
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 2000-10-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz8E01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz8E02
1FZ2E 1FZ5E 1FZ8E 1XMGE 1XVFE 1MMOG 1FZ7E 1FZ4E 1MTYG 1XU5E 1XVCE 1XMFE 1XVDE 1XVBE 1MHZG 1MHYG 1FZHE 1FZIE 1FYZE 1XMHE 4GAMC 1XVGE 1FZ6E 1FZ3E 1FZ1E 1XVEE 1FZ9E 1XU3E 1FZ0E
chains in the Genus database with same CATH superfamily
1FZ2E 4FVMA 1FZ5E 4M3RA 4JS5A 3SJJA 4J2BA 2RCUA 4ADOA 4ADNA 4J2DA 3UO2A 4EPHA 4FJGA 3CFPA 4DU4A 3L0MA 3E4YA 3TL8B 1WAFA 3CQ8A 4J2EA 1XVCE 2B7MA 3N1BA 4JRQA 4J2AA 1MHYG 4IT5A 3NCIA 4DTUA 4M3XA 3SPYA 4FJNA 3C95A 3J2PA 3NE6A 2DY4A 3E4WA 4DTPA 3QNNA 4GAMC 3RMBA 2OVPB 4FJ7A 1XVGE 2HD0A 1FZ6E 3QEIA 1IH7A 3LD8A 3RWUA 4RL5A 4M3WA 2ATQA 3C94A 4QNDA 4FJKA 3NHGA 4RG8A 2JHPA 1IG9A 5IZ7A 4AI6A 3RMCA 1Q9XA 1FZ8E 1P22A 3HGLA 3TABA 2FYOA 4JS4A 3SVIA 2LF3A 4FJIA 2QXFA 1FPOA 2OVQB 5IREA 4DU3A 4M3ZA 1XVBE 4I9LA 3LDSA 4FJ5A 1MHZG 1JW2A 2P1OB 3SQ4A 2OZMA 3SNNA 4HCCA 4EP9A 3S9HA 4E3SA 4KHNA 2FW3A 3C6NB 3LZJA 1XMHE 3TAEA 2P1QB 5IBKB 3SI6A 2RKHA 4M3UA 3TJYA 2OVRB 2B1EA 1FS1A 4DTSA 3LDBA 3UO3A 2JHCA 4DTOA 2E32A 4X5NA 4FJLA 3RMAA 4KHYA 2YB5A 1FZ1E 2JH8A 3L1NA 3QESA 2OYQA 1XU3E 3NDKA 3RMDA 2PFVA 1FZ0E 2B8IA 1XVFE 2LF6A 1XL3C 3SUOA 1MMOG 1FZ7E 3UIQA 4I9QA 3HGKE 4EYWA 2PFTA 1XU5E 4AKGA 2VJ4A 3KD5E 1FXXA 1XMFE 1XVDE 3TAGA 3SUQA 4FJHA 4FK0A 3LZIA 1FZHE 3OGLB 3QERA 1FZIE 3L8BA 1FYZE 3OGMB 4KHUA 1Q9YA 3HP9A 4JRPA 2VIXA 4E4BA 2DEBA 3HL8A 4KHSA 2P1PB 4DTJA 4KI4A 3NAEA 3WSOA 4M3YA 1CLQA 4AKHA 2JQTA 5H37A 2K5SA 3N1EA 4FJJA 3QEPA 4RNGA 3SUNA 3KD1E 1FZ9E 2DTUA 4QNCA 3SCXA 2JHAA 4FK4A 2JPNA 1XMGE 4DTRA 3SPZA 3V7DB 4DTMA 4FJ9A 2H4TA 4AKIA 3J27A 1FZ4E 3QETA 3SQ2A 1MTYG 2VJ5A 2MW2A 3L2OB 2JH9A 3SUPA 4ICGC 3QEVA 2MZWB 2P5OA 4KI6A 2MMBA 3SQ0A 4HCBA 3SQ1A 4I6JB 2E31A 4DTNA 2P1NB 3CFOA 4B08A 3C6OB 3QEXA 1NEXB 3TAFA 3QEWA 4M41A 1N1CA 4DU1A 4FK2A 4M45A 1WAJA 3CFRA 4KHQA 3BVOA 3OGKB 1FZ3E 4X5MA 2P5GA 1LDKE 4FJXA 4M42A 3K2OA 1XVEE 2P1MB 3C6PB 4M3TA 4KHWA 4DTXA 4FJMA 3QNOA 2OZSA 4FJ8A 3NGIA 3MKSB
chains in the Genus database with same CATH topology
1FZ2E 4FVMA 1FZ5E 4M3RA 4JS5A 3SJJA 4J2BA 2RCUA 4ADOA 4ADNA 4J2DA 4EPHA 4FJGA 3CFPA 4DU4A 3L0MA 3E4YA 3TL8B 1WAFA 3CQ8A 4J2EA 1XVCE 2B7MA 3N1BA 4JRQA 4J2AA 1MHYG 3NCIA 4DTUA 4M3XA 3SPYA 4FJNA 3C95A 3J2PA 3NE6A 2DY4A 3E4WA 4DTPA 3QNNA 4GAMC 3RMBA 2OVPB 4FJ7A 1XVGE 2HD0A 1FZ6E 3QEIA 1IH7A 3LD8A 3RWUA 4RL5A 4M3WA 2ATQA 3C94A 4QNDA 4FJKA 3NHGA 4RG8A 2JHPA 1IG9A 5IZ7A 4AI6A 3RMCA 1Q9XA 1FZ8E 1P22A 3HGLA 3TABA 2FYOA 4JS4A 3SVIA 2LF3A 4FJIA 2QXFA 5IREA 2OVQB 4DU3A 4M3ZA 1XVBE 4I9LA 3LDSA 4FJ5A 1MHZG 2P1OB 3SQ4A 2OZMA 3SNNA 4HCCA 4EP9A 3S9HA 4E3SA 4KHNA 2FW3A 3C6NB 3LZJA 1XMHE 3TAEA 2P1QB 5IBKB 3SI6A 4M3UA 3TJYA 2OVRB 2B1EA 1FS1A 4DTSA 3LDBA 2JHCA 4DTOA 2E32A 4X5NA 4FJLA 3RMAA 4KHYA 2YB5A 1FZ1E 2JH8A 3L1NA 3QESA 2OYQA 1XU3E 3NDKA 3RMDA 2PFVA 1FZ0E 2B8IA 1XVFE 2LF6A 1XL3C 3SUOA 1MMOG 1FZ7E 3UIQA 4I9QA 3HGKE 4EYWA 2PFTA 1XU5E 4AKGA 2VJ4A 3KD5E 1FXXA 1XMFE 1XVDE 3TAGA 3SUQA 4FJHA 4FK0A 3LZIA 1FZHE 3OGLB 3QERA 1FZIE 3L8BA 1FYZE 3OGMB 4KHUA 1Q9YA 3HP9A 4JRPA 2VIXA 4E4BA 2DEBA 3HL8A 4KHSA 2P1PB 4DTJA 4KI4A 3NAEA 3WSOA 4M3YA 1CLQA 4AKHA 5H37A 3N1EA 4FJJA 3QEPA 4RNGA 3SUNA 3KD1E 1FZ9E 2DTUA 4QNCA 3SCXA 2JHAA 4FK4A 2JPNA 1XMGE 4DTRA 3SPZA 3V7DB 4DTMA 4FJ9A 2H4TA 4AKIA 3J27A 1FZ4E 3QETA 3SQ2A 1MTYG 2VJ5A 3L2OB 3SUPA 2JH9A 3QEVA 2MZWB 2P5OA 4KI6A 2MMBA 3SQ0A 4HCBA 3SQ1A 4I6JB 2E31A 4DTNA 2P1NB 3CFOA 4B08A 3C6OB 3QEXA 1NEXB 3TAFA 3QEWA 4M41A 4DU1A 4FK2A 4M45A 1WAJA 3CFRA 4KHQA 3OGKB 1FZ3E 4X5MA 2P5GA 1LDKE 4FJXA 4M42A 3K2OA 1XVEE 2P1MB 3C6PB 4M3TA 4KHWA 4DTXA 4FJMA 3QNOA 2OZSA 4FJ8A 3NGIA 3MKSB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FZ2 E;  1FZ5 E;  1FZ8 E;  1XMG E;  1XVF E;  1MMO G;  1FZ7 E;  1FZ4 E;  1MTY G;  1XU5 E;  1XVC E;  1XMF E;  1XVD E;  1XVB E;  1MHZ G;  1MHY G;  1FZH E;  1FZI E;  1FYZ E;  1XMH E;  4GAM C;  1XVG E;  1FZ6 E;  1FZ3 E;  1FZ1 E;  1XVE E;  1FZ9 E;  1XU3 E;  1FZ0 E; 
#chains in the Genus database with same CATH topology
 1FZ2 E;  4FVM A;  1FZ5 E;  4M3R A;  4JS5 A;  3SJJ A;  4J2B A;  2RCU A;  4ADO A;  4ADN A;  4J2D A;  3UO2 A;  4EPH A;  4FJG A;  3CFP A;  4DU4 A;  3L0M A;  3E4Y A;  3TL8 B;  1WAF A;  3CQ8 A;  4J2E A;  1XVC E;  2B7M A;  3N1B A;  4JRQ A;  4J2A A;  1MHY G;  4IT5 A;  3NCI A;  4DTU A;  4M3X A;  3SPY A;  4FJN A;  3C95 A;  3J2P A;  3NE6 A;  2DY4 A;  3E4W A;  4DTP A;  3QNN A;  4GAM C;  3RMB A;  2OVP B;  4FJ7 A;  1XVG E;  2HD0 A;  1FZ6 E;  3QEI A;  1IH7 A;  3LD8 A;  3RWU A;  4RL5 A;  4M3W A;  2ATQ A;  3C94 A;  4QND A;  4FJK A;  3NHG A;  4RG8 A;  2JHP A;  1IG9 A;  5IZ7 A;  4AI6 A;  3RMC A;  1Q9X A;  1FZ8 E;  1P22 A;  3HGL A;  3TAB A;  2FYO A;  4JS4 A;  3SVI A;  2LF3 A;  4FJI A;  2QXF A;  1FPO A;  2OVQ B;  5IRE A;  4DU3 A;  4M3Z A;  1XVB E;  4I9L A;  3LDS A;  4FJ5 A;  1MHZ G;  1JW2 A;  2P1O B;  3SQ4 A;  2OZM A;  3SNN A;  4HCC A;  4EP9 A;  3S9H A;  4E3S A;  4KHN A;  2FW3 A;  3C6N B;  3LZJ A;  1XMH E;  3TAE A;  2P1Q B;  5IBK B;  3SI6 A;  2RKH A;  4M3U A;  3TJY A;  2OVR B;  2B1E A;  1FS1 A;  4DTS A;  3LDB A;  3UO3 A;  2JHC A;  4DTO A;  2E32 A;  4X5N A;  4FJL A;  3RMA A;  4KHY A;  2YB5 A;  1FZ1 E;  2JH8 A;  3L1N A;  3QES A;  2OYQ A;  1XU3 E;  3NDK A;  3RMD A;  2PFV A;  1FZ0 E;  2B8I A;  1XVF E;  2LF6 A;  1XL3 C;  3SUO A;  1MMO G;  1FZ7 E;  3UIQ A;  4I9Q A;  3HGK E;  4EYW A;  2PFT A;  1XU5 E;  4AKG A;  2VJ4 A;  3KD5 E;  1FXX A;  1XMF E;  1XVD E;  3TAG A;  3SUQ A;  4FJH A;  4FK0 A;  3LZI A;  1FZH E;  3OGL B;  3QER A;  1FZI E;  3L8B A;  1FYZ E;  3OGM B;  4KHU A;  1Q9Y A;  3HP9 A;  4JRP A;  2VIX A;  4E4B A;  2DEB A;  3HL8 A;  4KHS A;  2P1P B;  4DTJ A;  4KI4 A;  3NAE A;  3WSO A;  4M3Y A;  1CLQ A;  4AKH A;  2JQT A;  5H37 A;  2K5S A;  3N1E A;  4FJJ A;  3QEP A;  4RNG A;  3SUN A;  3KD1 E;  1FZ9 E;  2DTU A;  4QNC A;  3SCX A;  2JHA A;  4FK4 A;  2JPN A;  1XMG E;  4DTR A;  3SPZ A;  3V7D B;  4DTM A;  4FJ9 A;  2H4T A;  4AKI A;  3J27 A;  1FZ4 E;  3QET A;  3SQ2 A;  1MTY G;  2VJ5 A;  2MW2 A;  3L2O B;  2JH9 A;  3SUP A;  4ICG C;  3QEV A;  2MZW B;  2P5O A;  4KI6 A;  2MMB A;  3SQ0 A;  4HCB A;  3SQ1 A;  4I6J B;  2E31 A;  4DTN A;  2P1N B;  3CFO A;  4B08 A;  3C6O B;  3QEX A;  1NEX B;  3TAF A;  3QEW A;  4M41 A;  1N1C A;  4DU1 A;  4FK2 A;  4M45 A;  1WAJ A;  3CFR A;  4KHQ A;  3BVO A;  3OGK B;  1FZ3 E;  4X5M A;  2P5G A;  1LDK E;  4FJX A;  4M42 A;  3K2O A;  1XVE E;  2P1M B;  3C6P B;  4M3T A;  4KHW A;  4DTX A;  4FJM A;  3QNO A;  2OZS A;  4FJ8 A;  3NGI A;  3MKS B; 
#chains in the Genus database with same CATH homology
 1FZ2 E;  4FVM A;  1FZ5 E;  4M3R A;  4JS5 A;  3SJJ A;  4J2B A;  2RCU A;  4ADO A;  4ADN A;  4J2D A;  4EPH A;  4FJG A;  3CFP A;  4DU4 A;  3L0M A;  3E4Y A;  3TL8 B;  1WAF A;  3CQ8 A;  4J2E A;  1XVC E;  2B7M A;  3N1B A;  4JRQ A;  4J2A A;  1MHY G;  3NCI A;  4DTU A;  4M3X A;  3SPY A;  4FJN A;  3C95 A;  3J2P A;  3NE6 A;  2DY4 A;  3E4W A;  4DTP A;  3QNN A;  4GAM C;  3RMB A;  2OVP B;  4FJ7 A;  1XVG E;  2HD0 A;  1FZ6 E;  3QEI A;  1IH7 A;  3LD8 A;  3RWU A;  4RL5 A;  4M3W A;  2ATQ A;  3C94 A;  4QND A;  4FJK A;  3NHG A;  4RG8 A;  2JHP A;  1IG9 A;  5IZ7 A;  4AI6 A;  3RMC A;  1Q9X A;  1FZ8 E;  1P22 A;  3HGL A;  3TAB A;  2FYO A;  4JS4 A;  3SVI A;  2LF3 A;  4FJI A;  2QXF A;  5IRE A;  2OVQ B;  4DU3 A;  4M3Z A;  1XVB E;  4I9L A;  3LDS A;  4FJ5 A;  1MHZ G;  2P1O B;  3SQ4 A;  2OZM A;  3SNN A;  4HCC A;  4EP9 A;  3S9H A;  4E3S A;  4KHN A;  2FW3 A;  3C6N B;  3LZJ A;  1XMH E;  3TAE A;  2P1Q B;  5IBK B;  3SI6 A;  4M3U A;  3TJY A;  2OVR B;  2B1E A;  1FS1 A;  4DTS A;  3LDB A;  2JHC A;  4DTO A;  2E32 A;  4X5N A;  4FJL A;  3RMA A;  4KHY A;  2YB5 A;  1FZ1 E;  2JH8 A;  3L1N A;  3QES A;  2OYQ A;  1XU3 E;  3NDK A;  3RMD A;  2PFV A;  1FZ0 E;  2B8I A;  1XVF E;  2LF6 A;  1XL3 C;  3SUO A;  1MMO G;  1FZ7 E;  3UIQ A;  4I9Q A;  3HGK E;  4EYW A;  2PFT A;  1XU5 E;  4AKG A;  2VJ4 A;  3KD5 E;  1FXX A;  1XMF E;  1XVD E;  3TAG A;  3SUQ A;  4FJH A;  4FK0 A;  3LZI A;  1FZH E;  3OGL B;  3QER A;  1FZI E;  3L8B A;  1FYZ E;  3OGM B;  4KHU A;  1Q9Y A;  3HP9 A;  4JRP A;  2VIX A;  4E4B A;  2DEB A;  3HL8 A;  4KHS A;  2P1P B;  4DTJ A;  4KI4 A;  3NAE A;  3WSO A;  4M3Y A;  1CLQ A;  4AKH A;  5H37 A;  3N1E A;  4FJJ A;  3QEP A;  4RNG A;  3SUN A;  3KD1 E;  1FZ9 E;  2DTU A;  4QNC A;  3SCX A;  2JHA A;  4FK4 A;  2JPN A;  1XMG E;  4DTR A;  3SPZ A;  3V7D B;  4DTM A;  4FJ9 A;  2H4T A;  4AKI A;  3J27 A;  1FZ4 E;  3QET A;  3SQ2 A;  1MTY G;  2VJ5 A;  3L2O B;  3SUP A;  2JH9 A;  3QEV A;  2MZW B;  2P5O A;  4KI6 A;  2MMB A;  3SQ0 A;  4HCB A;  3SQ1 A;  4I6J B;  2E31 A;  4DTN A;  2P1N B;  3CFO A;  4B08 A;  3C6O B;  3QEX A;  1NEX B;  3TAF A;  3QEW A;  4M41 A;  4DU1 A;  4FK2 A;  4M45 A;  1WAJ A;  3CFR A;  4KHQ A;  3OGK B;  1FZ3 E;  4X5M A;  2P5G A;  1LDK E;  4FJX A;  4M42 A;  3K2O A;  1XVE E;  2P1M B;  3C6P B;  4M3T A;  4KHW A;  4DTX A;  4FJM A;  3QNO A;  2OZS A;  4FJ8 A;  3NGI A;  3MKS B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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