1FZ8E

Methane monooxygenase hydroxylase, form ii cocrystallized with dibromomethane
Total Genus 61
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
167
structure length
167
Chain Sequence
KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQSP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase.
pubmed doi rcsb
molecule tags Oxidoreductase
molecule keywords METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN
total genus 61
structure length 167
sequence length 167
chains with identical sequence F
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 2000-10-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz8E01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz8E02
1FYZE 1XVGE 1FZ3E 1FZ5E 1XMGE 1FZ9E 1FZ2E 1MHZG 1XMFE 1XU5E 4GAMC 1MTYG 1XU3E 1XVBE 1XVDE 1FZ4E 1XVFE 1XVEE 1MMOG 1FZ1E 1FZ7E 1XVCE 1FZHE 1XMHE 1MHYG 1FZ8E 1FZIE 1FZ0E 1FZ6E
chains in the Genus database with same CATH superfamily
3HL8A 3J2PA 3L0MA 2B1EA 1FYZE 3C6PB 1IH7A 1XVGE 2JH8A 3RWUA 4KHYA 1WAFA 5H37A 4RL5A 4RNGA 2QXFA 1XMGE 4J2BA 1FPOA 4DTUA 1CLQA 1XU5E 3C95A 2OVQB 3SPYA 2OZMA 4M3YA 5IREA 4FK4A 1NEXB 4QNCA 4JRQA 2P5GA 4FJIA 4AI6A 4FK0A 3KD1E 4X5NA 4E4BA 2OZSA 4FJKA 4M3ZA 4I6JB 1FZ4E 1XL3C 1XVFE 4FJNA 1MMOG 4FJHA 4HCCA 3NDKA 4DTMA 4FK2A 2JHCA 3UO3A 4J2DA 4EPHA 1FS1A 2P1OB 3QNNA 3KD5E 3UIQA 2P1NB 1MHYG 1Q9XA 2OVPB 3LZJA 3UO2A 3TJYA 3TL8B 3N1BA 2RCUA 3SUOA 2PFVA 4DTOA 2VIXA 4M3WA 1LDKE 1FZ3E 3QEVA 1Q9YA 3QEPA 4DU4A 3SJJA 2VJ4A 4E3SA 1FZ9E 1XMFE 3L8BA 3LDSA 3TAFA 3LZIA 4KI4A 2JHAA 4FJLA 2B7MA 4DTPA 2JH9A 4M45A 3RMAA 1XVBE 1XVDE 2HD0A 2RKHA 4DU1A 4AKHA 1WAJA 1IG9A 3SI6A 3SQ1A 2MZWB 3SVIA 3SUNA 5IBKB 2JPNA 2LF6A 4ADOA 2FYOA 1FZHE 4M3UA 2VJ5A 1FZ8E 3SNNA 3LD8A 4M3XA 2P1PB 3C6OB 3SPZA 3L2OB 2YB5A 4ICGC 4DTJA 4KHWA 4JRPA 4DTRA 2MW2A 4JS5A 2FW3A 4FVMA 4IT5A 3HGKE 3J27A 4KHSA 1FZ5E 4M42A 2K5SA 3SQ0A 1FZ2E 1MHZG 1FXXA 4RG8A 2DY4A 4EP9A 3CFRA 1MTYG 2MMBA 4FJ5A 4M3RA 3NCIA 3K2OA 1XU3E 3CFOA 3HGLA 1XVEE 3N1EA 3NE6A 4FJ7A 3QERA 4DU3A 4FJXA 3E4WA 3TAGA 3TAEA 3S9HA 4KHNA 4M3TA 2H4TA 2E31A 4KHUA 2JHPA 3QESA 1XVCE 1XMHE 2OYQA 3NAEA 4FJJA 3NHGA 4DTSA 3MKSB 2P5OA 4KI6A 1FZIE 4I9LA 3CQ8A 1FZ6E 2B8IA 3E4YA 2DEBA 3RMBA 2P1QB 3L1NA 3QETA 3SQ2A 2PFTA 3RMDA 3OGMB 4EYWA 2OVRB 3CFPA 4FJ9A 4M41A 2P1MB 3QEXA 1JW2A 3QEWA 4FJGA 4I9QA 4QNDA 4GAMC 3QNOA 2E32A 3SUQA 3BVOA 1P22A 4DTNA 4B08A 3SUPA 3SCXA 2JQTA 3LDBA 3OGLB 4X5MA 3C6NB 4HCBA 1FZ1E 3WSOA 4J2AA 2DTUA 2LF3A 4JS4A 4FJ8A 2ATQA 3HP9A 1FZ7E 3OGKB 3NGIA 3QEIA 4FJMA 5IZ7A 3V7DB 3SQ4A 3RMCA 4J2EA 4AKGA 3TABA 3C94A 4ADNA 4KHQA 1FZ0E 4AKIA 1N1CA 4DTXA
chains in the Genus database with same CATH topology
3HL8A 3J2PA 3L0MA 2B1EA 1FYZE 3C6PB 1IH7A 1XVGE 2JH8A 3RWUA 4KHYA 1WAFA 5H37A 4RL5A 4RNGA 2QXFA 1XMGE 4J2BA 4DTUA 1CLQA 1XU5E 3C95A 2OVQB 3SPYA 2OZMA 4M3YA 5IREA 4FK4A 1NEXB 4QNCA 4JRQA 2P5GA 4FJIA 4AI6A 4FK0A 3KD1E 4X5NA 4E4BA 2OZSA 4FJKA 4M3ZA 4I6JB 1FZ4E 1XL3C 1XVFE 4FJNA 1MMOG 4FJHA 4HCCA 3NDKA 4DTMA 4FK2A 2JHCA 4J2DA 4EPHA 1FS1A 2P1OB 3QNNA 3KD5E 3UIQA 2P1NB 1MHYG 1Q9XA 2OVPB 3LZJA 3TJYA 3TL8B 3N1BA 2RCUA 3SUOA 2PFVA 4DTOA 2VIXA 4M3WA 1LDKE 1FZ3E 3QEVA 1Q9YA 3QEPA 4DU4A 3SJJA 2VJ4A 4E3SA 1FZ9E 1XMFE 3L8BA 3LDSA 3TAFA 3LZIA 4KI4A 2JHAA 4FJLA 2B7MA 4DTPA 2JH9A 4M45A 3RMAA 1XVBE 1XVDE 2HD0A 4DU1A 4AKHA 1WAJA 1IG9A 3SI6A 3SQ1A 2MZWB 3SVIA 3SUNA 5IBKB 2JPNA 2LF6A 4ADOA 2FYOA 1FZHE 4M3UA 2VJ5A 1FZ8E 3SNNA 3LD8A 4M3XA 2P1PB 3C6OB 3SPZA 3L2OB 2YB5A 4DTJA 4KHWA 4JRPA 4DTRA 4JS5A 2FW3A 4FVMA 3HGKE 3J27A 4KHSA 1FZ5E 4M42A 3SQ0A 1FZ2E 1MHZG 1FXXA 4RG8A 2DY4A 4EP9A 3CFRA 1MTYG 2MMBA 4FJ5A 4M3RA 3NCIA 3K2OA 1XU3E 3CFOA 3HGLA 1XVEE 3N1EA 3NE6A 4FJ7A 3QERA 4DU3A 4FJXA 3E4WA 3TAGA 3TAEA 3S9HA 4KHNA 4M3TA 2H4TA 2E31A 4KHUA 2JHPA 3QESA 1XVCE 1XMHE 2OYQA 3NAEA 4FJJA 3NHGA 4DTSA 3MKSB 2P5OA 4KI6A 1FZIE 4I9LA 3CQ8A 1FZ6E 2B8IA 3E4YA 2DEBA 3RMBA 2P1QB 3L1NA 3QETA 3SQ2A 2PFTA 3RMDA 3OGMB 4EYWA 2OVRB 3CFPA 4FJ9A 4M41A 2P1MB 3QEXA 3QEWA 4FJGA 4I9QA 4QNDA 4GAMC 3QNOA 2E32A 3SUQA 1P22A 4DTNA 4B08A 3SUPA 3SCXA 3LDBA 3OGLB 4X5MA 3C6NB 4HCBA 1FZ1E 3WSOA 4J2AA 2DTUA 2LF3A 4JS4A 4FJ8A 2ATQA 3HP9A 1FZ7E 3OGKB 3NGIA 3QEIA 4FJMA 5IZ7A 3V7DB 3SQ4A 3RMCA 4J2EA 4AKGA 3TABA 3C94A 4ADNA 4KHQA 1FZ0E 4AKIA 4DTXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FYZ E;  1XVG E;  1FZ3 E;  1FZ5 E;  1XMG E;  1FZ9 E;  1FZ2 E;  1MHZ G;  1XMF E;  1XU5 E;  4GAM C;  1MTY G;  1XU3 E;  1XVB E;  1XVD E;  1FZ4 E;  1XVF E;  1XVE E;  1MMO G;  1FZ1 E;  1FZ7 E;  1XVC E;  1FZH E;  1XMH E;  1MHY G;  1FZ8 E;  1FZI E;  1FZ0 E;  1FZ6 E; 
#chains in the Genus database with same CATH topology
 3HL8 A;  3J2P A;  3L0M A;  2B1E A;  1FYZ E;  3C6P B;  1IH7 A;  1XVG E;  2JH8 A;  3RWU A;  4KHY A;  1WAF A;  5H37 A;  4RL5 A;  4RNG A;  2QXF A;  1XMG E;  4J2B A;  1FPO A;  4DTU A;  1CLQ A;  1XU5 E;  3C95 A;  2OVQ B;  3SPY A;  2OZM A;  4M3Y A;  5IRE A;  4FK4 A;  1NEX B;  4QNC A;  4JRQ A;  2P5G A;  4FJI A;  4AI6 A;  4FK0 A;  3KD1 E;  4X5N A;  4E4B A;  2OZS A;  4FJK A;  4M3Z A;  4I6J B;  1FZ4 E;  1XL3 C;  1XVF E;  4FJN A;  1MMO G;  4FJH A;  4HCC A;  3NDK A;  4DTM A;  4FK2 A;  2JHC A;  3UO3 A;  4J2D A;  4EPH A;  1FS1 A;  2P1O B;  3QNN A;  3KD5 E;  3UIQ A;  2P1N B;  1MHY G;  1Q9X A;  2OVP B;  3LZJ A;  3UO2 A;  3TJY A;  3TL8 B;  3N1B A;  2RCU A;  3SUO A;  2PFV A;  4DTO A;  2VIX A;  4M3W A;  1LDK E;  1FZ3 E;  3QEV A;  1Q9Y A;  3QEP A;  4DU4 A;  3SJJ A;  2VJ4 A;  4E3S A;  1FZ9 E;  1XMF E;  3L8B A;  3LDS A;  3TAF A;  3LZI A;  4KI4 A;  2JHA A;  4FJL A;  2B7M A;  4DTP A;  2JH9 A;  4M45 A;  3RMA A;  1XVB E;  1XVD E;  2HD0 A;  2RKH A;  4DU1 A;  4AKH A;  1WAJ A;  1IG9 A;  3SI6 A;  3SQ1 A;  2MZW B;  3SVI A;  3SUN A;  5IBK B;  2JPN A;  2LF6 A;  4ADO A;  2FYO A;  1FZH E;  4M3U A;  2VJ5 A;  1FZ8 E;  3SNN A;  3LD8 A;  4M3X A;  2P1P B;  3C6O B;  3SPZ A;  3L2O B;  2YB5 A;  4ICG C;  4DTJ A;  4KHW A;  4JRP A;  4DTR A;  2MW2 A;  4JS5 A;  2FW3 A;  4FVM A;  4IT5 A;  3HGK E;  3J27 A;  4KHS A;  1FZ5 E;  4M42 A;  2K5S A;  3SQ0 A;  1FZ2 E;  1MHZ G;  1FXX A;  4RG8 A;  2DY4 A;  4EP9 A;  3CFR A;  1MTY G;  2MMB A;  4FJ5 A;  4M3R A;  3NCI A;  3K2O A;  1XU3 E;  3CFO A;  3HGL A;  1XVE E;  3N1E A;  3NE6 A;  4FJ7 A;  3QER A;  4DU3 A;  4FJX A;  3E4W A;  3TAG A;  3TAE A;  3S9H A;  4KHN A;  4M3T A;  2H4T A;  2E31 A;  4KHU A;  2JHP A;  3QES A;  1XVC E;  1XMH E;  2OYQ A;  3NAE A;  4FJJ A;  3NHG A;  4DTS A;  3MKS B;  2P5O A;  4KI6 A;  1FZI E;  4I9L A;  3CQ8 A;  1FZ6 E;  2B8I A;  3E4Y A;  2DEB A;  3RMB A;  2P1Q B;  3L1N A;  3QET A;  3SQ2 A;  2PFT A;  3RMD A;  3OGM B;  4EYW A;  2OVR B;  3CFP A;  4FJ9 A;  4M41 A;  2P1M B;  3QEX A;  1JW2 A;  3QEW A;  4FJG A;  4I9Q A;  4QND A;  4GAM C;  3QNO A;  2E32 A;  3SUQ A;  3BVO A;  1P22 A;  4DTN A;  4B08 A;  3SUP A;  3SCX A;  2JQT A;  3LDB A;  3OGL B;  4X5M A;  3C6N B;  4HCB A;  1FZ1 E;  3WSO A;  4J2A A;  2DTU A;  2LF3 A;  4JS4 A;  4FJ8 A;  2ATQ A;  3HP9 A;  1FZ7 E;  3OGK B;  3NGI A;  3QEI A;  4FJM A;  5IZ7 A;  3V7D B;  3SQ4 A;  3RMC A;  4J2E A;  4AKG A;  3TAB A;  3C94 A;  4ADN A;  4KHQ A;  1FZ0 E;  4AKI A;  1N1C A;  4DTX A; 
#chains in the Genus database with same CATH homology
 3HL8 A;  3J2P A;  3L0M A;  2B1E A;  1FYZ E;  3C6P B;  1IH7 A;  1XVG E;  2JH8 A;  3RWU A;  4KHY A;  1WAF A;  5H37 A;  4RL5 A;  4RNG A;  2QXF A;  1XMG E;  4J2B A;  4DTU A;  1CLQ A;  1XU5 E;  3C95 A;  2OVQ B;  3SPY A;  2OZM A;  4M3Y A;  5IRE A;  4FK4 A;  1NEX B;  4QNC A;  4JRQ A;  2P5G A;  4FJI A;  4AI6 A;  4FK0 A;  3KD1 E;  4X5N A;  4E4B A;  2OZS A;  4FJK A;  4M3Z A;  4I6J B;  1FZ4 E;  1XL3 C;  1XVF E;  4FJN A;  1MMO G;  4FJH A;  4HCC A;  3NDK A;  4DTM A;  4FK2 A;  2JHC A;  4J2D A;  4EPH A;  1FS1 A;  2P1O B;  3QNN A;  3KD5 E;  3UIQ A;  2P1N B;  1MHY G;  1Q9X A;  2OVP B;  3LZJ A;  3TJY A;  3TL8 B;  3N1B A;  2RCU A;  3SUO A;  2PFV A;  4DTO A;  2VIX A;  4M3W A;  1LDK E;  1FZ3 E;  3QEV A;  1Q9Y A;  3QEP A;  4DU4 A;  3SJJ A;  2VJ4 A;  4E3S A;  1FZ9 E;  1XMF E;  3L8B A;  3LDS A;  3TAF A;  3LZI A;  4KI4 A;  2JHA A;  4FJL A;  2B7M A;  4DTP A;  2JH9 A;  4M45 A;  3RMA A;  1XVB E;  1XVD E;  2HD0 A;  4DU1 A;  4AKH A;  1WAJ A;  1IG9 A;  3SI6 A;  3SQ1 A;  2MZW B;  3SVI A;  3SUN A;  5IBK B;  2JPN A;  2LF6 A;  4ADO A;  2FYO A;  1FZH E;  4M3U A;  2VJ5 A;  1FZ8 E;  3SNN A;  3LD8 A;  4M3X A;  2P1P B;  3C6O B;  3SPZ A;  3L2O B;  2YB5 A;  4DTJ A;  4KHW A;  4JRP A;  4DTR A;  4JS5 A;  2FW3 A;  4FVM A;  3HGK E;  3J27 A;  4KHS A;  1FZ5 E;  4M42 A;  3SQ0 A;  1FZ2 E;  1MHZ G;  1FXX A;  4RG8 A;  2DY4 A;  4EP9 A;  3CFR A;  1MTY G;  2MMB A;  4FJ5 A;  4M3R A;  3NCI A;  3K2O A;  1XU3 E;  3CFO A;  3HGL A;  1XVE E;  3N1E A;  3NE6 A;  4FJ7 A;  3QER A;  4DU3 A;  4FJX A;  3E4W A;  3TAG A;  3TAE A;  3S9H A;  4KHN A;  4M3T A;  2H4T A;  2E31 A;  4KHU A;  2JHP A;  3QES A;  1XVC E;  1XMH E;  2OYQ A;  3NAE A;  4FJJ A;  3NHG A;  4DTS A;  3MKS B;  2P5O A;  4KI6 A;  1FZI E;  4I9L A;  3CQ8 A;  1FZ6 E;  2B8I A;  3E4Y A;  2DEB A;  3RMB A;  2P1Q B;  3L1N A;  3QET A;  3SQ2 A;  2PFT A;  3RMD A;  3OGM B;  4EYW A;  2OVR B;  3CFP A;  4FJ9 A;  4M41 A;  2P1M B;  3QEX A;  3QEW A;  4FJG A;  4I9Q A;  4QND A;  4GAM C;  3QNO A;  2E32 A;  3SUQ A;  1P22 A;  4DTN A;  4B08 A;  3SUP A;  3SCX A;  3LDB A;  3OGL B;  4X5M A;  3C6N B;  4HCB A;  1FZ1 E;  3WSO A;  4J2A A;  2DTU A;  2LF3 A;  4JS4 A;  4FJ8 A;  2ATQ A;  3HP9 A;  1FZ7 E;  3OGK B;  3NGI A;  3QEI A;  4FJM A;  5IZ7 A;  3V7D B;  3SQ4 A;  3RMC A;  4J2E A;  4AKG A;  3TAB A;  3C94 A;  4ADN A;  4KHQ A;  1FZ0 E;  4AKI A;  4DTX A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...