1G58A

Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase gold derivative
Total Genus 71
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
209
structure length
196
Chain Sequence
LLSSFGTPFERVENALAALREGRGVMVLDNEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
molecule keywords 3,4-DIHYDROXY-2-BUTANONE 4-PHOSPHATE SYNTHASE
publication title Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase of riboflavin biosynthesis.
pubmed doi rcsb
source organism Escherichia coli
total genus 71
structure length 196
sequence length 209
chains with identical sequence B
ec nomenclature ec 4.1.99.12: 3,4-dihydroxy-2-butanone-4-phosphate synthase.
pdb deposition date 2000-10-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00926 DHBP_synthase 3,4-dihydroxy-2-butanone 4-phosphate synthase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.870.10 Alpha Beta Alpha-Beta Complex DHBP synthase DHBP synthase 1g58A00
1TKUA 2MX1A 4P8EA 4P6CA 1JCUA 1IEZA 2EQAA 4I14A 1K4OA 3LQUA 3LRJA 4E1BA 1G58A 1K4IA 3L7VA 1KK9A 4P6DA 1PVYA 2RIUA 1TKSA 4FFJA 1K7JA 3LS6A 1K49A 1G57A 1K4LA 1PVWA 1K4PA 3MGZA 3MK5A 3MIOA 1SNNA 4P8JA 3AJEA 3H07A 4P6PA 4P77A 2RISA 1HRUA
chains in the Genus database with same CATH superfamily
1TKUA 2MX1A 4P8EA 4P6CA 1JCUA 3TTFA 1IEZA 2EQAA 4I14A 3TSPA 1K4OA 3LQUA 3LRJA 4E1BA 1G58A 3TSQA 3TTDA 1K4IA 3L7VA 1KK9A 4P6DA 3VESA 3VEZA 1PVYA 2RIUA 3VENA 3VF4A 3VETA 1TKSA 4FFJA 1K7JA 3TSUA 3VTIA 3LS6A 1K49A 3VF2A 1G57A 1K4LA 3VEXA 1PVWA 1K4PA 3MGZA 3MK5A 3MIOA 1SNNA 4P8JA 3VEWA 3AJEA 3H07A 4P6PA 3VTHA 4P77A 2RISA 3VEOA 3VERA 3TTCA 1HRUA
chains in the Genus database with same CATH topology
1TKUA 2MX1A 4P8EA 4P6CA 1JCUA 3TTFA 1IEZA 2EQAA 4I14A 3TSPA 1K4OA 3LQUA 3LRJA 4E1BA 1G58A 3TSQA 3TTDA 1K4IA 3L7VA 1KK9A 4P6DA 3VESA 3VEZA 1PVYA 2RIUA 3VENA 3VF4A 3VETA 1TKSA 4FFJA 1K7JA 3TSUA 3VTIA 3LS6A 1K49A 3VF2A 1G57A 1K4LA 3VEXA 1PVWA 1K4PA 3MGZA 3MK5A 3MIOA 1SNNA 4P8JA 3VEWA 3AJEA 3H07A 4P6PA 3VTHA 4P77A 2RISA 3VEOA 3VERA 3TTCA 1HRUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TKU A;  2MX1 A;  4P8E A;  4P6C A;  1JCU A;  1IEZ A;  2EQA A;  4I14 A;  1K4O A;  3LQU A;  3LRJ A;  4E1B A;  1G58 A;  1K4I A;  3L7V A;  1KK9 A;  4P6D A;  1PVY A;  2RIU A;  1TKS A;  4FFJ A;  1K7J A;  3LS6 A;  1K49 A;  1G57 A;  1K4L A;  1PVW A;  1K4P A;  3MGZ A;  3MK5 A;  3MIO A;  1SNN A;  4P8J A;  3AJE A;  3H07 A;  4P6P A;  4P77 A;  2RIS A;  1HRU A; 
#chains in the Genus database with same CATH topology
 1TKU A;  2MX1 A;  4P8E A;  4P6C A;  1JCU A;  3TTF A;  1IEZ A;  2EQA A;  4I14 A;  3TSP A;  1K4O A;  3LQU A;  3LRJ A;  4E1B A;  1G58 A;  3TSQ A;  3TTD A;  1K4I A;  3L7V A;  1KK9 A;  4P6D A;  3VES A;  3VEZ A;  1PVY A;  2RIU A;  3VEN A;  3VF4 A;  3VET A;  1TKS A;  4FFJ A;  1K7J A;  3TSU A;  3VTI A;  3LS6 A;  1K49 A;  3VF2 A;  1G57 A;  1K4L A;  3VEX A;  1PVW A;  1K4P A;  3MGZ A;  3MK5 A;  3MIO A;  1SNN A;  4P8J A;  3VEW A;  3AJE A;  3H07 A;  4P6P A;  3VTH A;  4P77 A;  2RIS A;  3VEO A;  3VER A;  3TTC A;  1HRU A; 
#chains in the Genus database with same CATH homology
 1TKU A;  2MX1 A;  4P8E A;  4P6C A;  1JCU A;  3TTF A;  1IEZ A;  2EQA A;  4I14 A;  3TSP A;  1K4O A;  3LQU A;  3LRJ A;  4E1B A;  1G58 A;  3TSQ A;  3TTD A;  1K4I A;  3L7V A;  1KK9 A;  4P6D A;  3VES A;  3VEZ A;  1PVY A;  2RIU A;  3VEN A;  3VF4 A;  3VET A;  1TKS A;  4FFJ A;  1K7J A;  3TSU A;  3VTI A;  3LS6 A;  1K49 A;  3VF2 A;  1G57 A;  1K4L A;  3VEX A;  1PVW A;  1K4P A;  3MGZ A;  3MK5 A;  3MIO A;  1SNN A;  4P8J A;  3VEW A;  3AJE A;  3H07 A;  4P6P A;  3VTH A;  4P77 A;  2RIS A;  3VEO A;  3VER A;  3TTC A;  1HRU A; 
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