1G6MA

Nmr solution structure of cbt2
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
62
structure length
62
Chain Sequence
LECHNQQSSQTPTTTGCSGGENNCYKKEWRDNRGYRTERGCGCPSVKKGIGINCCTTDRCNN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords SHORT NEUROTOXIN 1
publication title NMR Solution structure of CBT2
rcsb
total genus 7
structure length 62
sequence length 62
ec nomenclature
pdb deposition date 2000-11-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1g6mA00
1QKEA 1DRSA 1ONJA 1KS6A 4EY8B 2CRTA 2MJYA 3PLCA 4LFTA 2BTXA 2HLRA 2CTXA 2H5FA 2MUPA 2QJ9C 4AEAA 1W6BA 4RUDA 1KBSA 2JQPA 4FAOC 1IK8A 1PLOA 1BXPA 1LSIA 1H0JA 1NORA 2HLQA 4P7UA 3VTSA 1I02A 1TXAA 1HC9A 1IDGA 2MUOA 6EBXA 1BTEA 1KBTA 3KFDI 4OM4A 3LAQU 1IQ9A 1FF4A 3NEQA 1TFSA 1CXNA 1REWC 2NBTA 1IKCA 1JGKA 1FFJA 1JBDA 2H64B 2QC1A 1V6PA 1UG4A 2K3GA 2GOOB 2X8BB 2CCXA 1KFHA 3BT2U 1YWHA 2FD6U 2JVEA 4DO8A 1KTZB 2H8UA 2CDXA 2OFSA 2QJAC 1CDRA 2H62C 5DO6A 1IJCA 4ZQYA 1NTXA 1ABTA 1IDLA 5IMTD 2PJYC 1CHVS 1RGJA 1IDHA 2H62D 5IMYC 1FRAA 1NXBA 1HAAA 1KC4A 3QB4B 3EBXA 2BHIA 2QJBC 1ERAA 1JE9A 1XT3A 1ZADA 3ERAA 1FSCA 1MR6A 2LCRA 3NH7A 2VLWA 1VB0A 3EVSC 1RL5A 2MJ0A 2H7ZA 2LA1A 1QKDA 2MJ4A 4BDTB 1KU6B 1COEA 1HC9B 4BIKB 1KL8A 1LJZA 1NYUA 1LX5B 2N99A 3BT1U 4QTIU 1TXBA 1KBAA 4IYEA 3HH7A 2L03A 1IDIA 1CREA 1F94A 1FASA 1KXIA 2PJYB 5EBXA 1S4YA 2H64C 1L4WA 1CVOA 1M9ZA 1NYSA 4OM5A 2CRSA 2L5SA 4XJJA 2J8BA 1CCQA 1LXGA 2ABXA 1CXOA 1CDTA 4HQPF 1HOYA 1FSSB 1QM7A 3NDSA 1NEAA 3FEVA 1B41B 1LXHA 2MHYA 3U74U 1MAHF 1G6MA 1ERGA 1CODA 2I9BE 2UWRA 2ERAA 1CRFA 1F8UB 3KFDE 1CDSA 1CB9A 5DU1A 4UY2C 5DZ5A 3U73U 2H7ZB 1ES7B 1TGXA 2UX2A 2GOOC 2MFAA 4FAOE 1CTXA 1HAJA 1CDQA 1NTNA
chains in the Genus database with same CATH superfamily
1QKEA 1DRSA 1ONJA 1KS6A 4EY8B 2CRTA 2MJYA 3PLCA 4LFTA 2BTXA 2HLRA 2CTXA 2H5FA 2MUPA 2QJ9C 4AEAA 1W6BA 4RUDA 1KBSA 2JQPA 4FAOC 1IK8A 1PLOA 1BXPA 1LSIA 1H0JA 1NORA 2HLQA 4P7UA 3VTSA 1I02A 1TXAA 1HC9A 1IDGA 2MUOA 6EBXA 1BTEA 1KBTA 3KFDI 4OM4A 3LAQU 1IQ9A 1FF4A 3NEQA 1TFSA 1CXNA 1REWC 2NBTA 1IKCA 1JGKA 1FFJA 1JBDA 2H64B 2QC1A 1V6PA 1UG4A 2K3GA 2GOOB 2X8BB 2CCXA 1KFHA 3BT2U 1YWHA 2FD6U 2JVEA 4DO8A 1KTZB 2H8UA 2CDXA 2OFSA 2QJAC 1CDRA 2H62C 5DO6A 1IJCA 4ZQYA 1NTXA 1ABTA 1IDLA 5IMTD 2PJYC 1CHVS 1RGJA 1IDHA 2H62D 5IMYC 1FRAA 1NXBA 1HAAA 1KC4A 3QB4B 3EBXA 2BHIA 2QJBC 1ERAA 1JE9A 1XT3A 1ZADA 3ERAA 1FSCA 1MR6A 2LCRA 3NH7A 2VLWA 1VB0A 3EVSC 1RL5A 2MJ0A 2H7ZA 2LA1A 1QKDA 2MJ4A 4BDTB 1KU6B 1COEA 1HC9B 4BIKB 1KL8A 1LJZA 1NYUA 1LX5B 2N99A 3BT1U 4QTIU 1TXBA 1KBAA 4IYEA 3HH7A 2L03A 1IDIA 1CREA 1F94A 1FASA 1KXIA 2PJYB 5EBXA 1S4YA 2H64C 1L4WA 1CVOA 1M9ZA 1NYSA 4OM5A 2CRSA 2L5SA 4XJJA 2J8BA 1CCQA 1LXGA 2ABXA 1CXOA 1CDTA 4HQPF 1HOYA 1FSSB 1QM7A 3NDSA 1NEAA 3FEVA 1B41B 1LXHA 2MHYA 3U74U 1MAHF 4KSNA 1G6MA 1ERGA 1CODA 2I9BE 2UWRA 2ERAA 1CRFA 1F8UB 3KFDE 1CDSA 1CB9A 5DU1A 4UY2C 5DZ5A 3U73U 2H7ZB 1ES7B 1TGXA 2UX2A 2GOOC 2MFAA 4FAOE 1CTXA 1HAJA 1CDQA 1NTNA
chains in the Genus database with same CATH topology
1QKEA 1DRSA 1ONJA 1KS6A 4EY8B 2CRTA 2MJYA 3PLCA 4LFTA 2BTXA 2HLRA 2CTXA 2H5FA 2MUPA 2QJ9C 4AEAA 1W6BA 4RUDA 1KBSA 2JQPA 4FAOC 1IK8A 1PLOA 1BXPA 1LSIA 1H0JA 1NORA 2HLQA 4P7UA 3VTSA 1I02A 1TXAA 1HC9A 1IDGA 2MUOA 6EBXA 1BTEA 1KBTA 3KFDI 4OM4A 3LAQU 1IQ9A 1FF4A 3NEQA 1TFSA 1CXNA 1REWC 2NBTA 1IKCA 1JGKA 1FFJA 1JBDA 2H64B 2QC1A 1V6PA 1UG4A 2K3GA 2GOOB 2X8BB 2CCXA 1KFHA 3BT2U 1YWHA 2FD6U 2JVEA 4DO8A 1KTZB 2H8UA 2CDXA 2OFSA 2QJAC 1CDRA 2H62C 5DO6A 1IJCA 4ZQYA 1NTXA 1ABTA 1IDLA 5IMTD 2PJYC 1CHVS 1RGJA 1IDHA 2H62D 5IMYC 1FRAA 1NXBA 1HAAA 1KC4A 3QB4B 3EBXA 2BHIA 2QJBC 1ERAA 1JE9A 1XT3A 1ZADA 3ERAA 1FSCA 1MR6A 2LCRA 3NH7A 2VLWA 1VB0A 3EVSC 1RL5A 2MJ0A 2H7ZA 2LA1A 1QKDA 2MJ4A 4BDTB 1KU6B 1COEA 1HC9B 4BIKB 1KL8A 1LJZA 1NYUA 1LX5B 2N99A 3BT1U 4QTIU 1TXBA 1KBAA 4IYEA 3HH7A 2L03A 1IDIA 1CREA 1F94A 1FASA 1KXIA 2PJYB 5EBXA 1S4YA 2H64C 1L4WA 1CVOA 1M9ZA 1NYSA 4OM5A 2CRSA 2L5SA 4XJJA 2J8BA 1CCQA 1LXGA 2ABXA 1CXOA 1CDTA 4HQPF 1HOYA 1FSSB 1QM7A 3NDSA 1NEAA 3FEVA 1B41B 1LXHA 2MHYA 3U74U 1MAHF 4KSNA 1G6MA 1ERGA 1CODA 2I9BE 2UWRA 2ERAA 1CRFA 1F8UB 3KFDE 1CDSA 1CB9A 5DU1A 4UY2C 5DZ5A 3U73U 2H7ZB 1ES7B 1TGXA 2UX2A 2GOOC 2MFAA 4FAOE 1CTXA 1HAJA 1CDQA 1NTNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QKE A;  1DRS A;  1ONJ A;  1KS6 A;  4EY8 B;  2CRT A;  2MJY A;  3PLC A;  4LFT A;  2BTX A;  2HLR A;  2CTX A;  2H5F A;  2MUP A;  2QJ9 C;  4AEA A;  1W6B A;  4RUD A;  1KBS A;  2JQP A;  4FAO C;  1IK8 A;  1PLO A;  1BXP A;  1LSI A;  1H0J A;  1NOR A;  2HLQ A;  4P7U A;  3VTS A;  1I02 A;  1TXA A;  1HC9 A;  1IDG A;  2MUO A;  6EBX A;  1BTE A;  1KBT A;  3KFD I;  4OM4 A;  3LAQ U;  1IQ9 A;  1FF4 A;  3NEQ A;  1TFS A;  1CXN A;  1REW C;  2NBT A;  1IKC A;  1JGK A;  1FFJ A;  1JBD A;  2H64 B;  2QC1 A;  1V6P A;  1UG4 A;  2K3G A;  2GOO B;  2X8B B;  2CCX A;  1KFH A;  3BT2 U;  1YWH A;  2FD6 U;  2JVE A;  4DO8 A;  1KTZ B;  2H8U A;  2CDX A;  2OFS A;  2QJA C;  1CDR A;  2H62 C;  5DO6 A;  1IJC A;  4ZQY A;  1NTX A;  1ABT A;  1IDL A;  5IMT D;  2PJY C;  1CHV S;  1RGJ A;  1IDH A;  2H62 D;  5IMY C;  1FRA A;  1NXB A;  1HAA A;  1KC4 A;  3QB4 B;  3EBX A;  2BHI A;  2QJB C;  1ERA A;  1JE9 A;  1XT3 A;  1ZAD A;  3ERA A;  1FSC A;  1MR6 A;  2LCR A;  3NH7 A;  2VLW A;  1VB0 A;  3EVS C;  1RL5 A;  2MJ0 A;  2H7Z A;  2LA1 A;  1QKD A;  2MJ4 A;  4BDT B;  1KU6 B;  1COE A;  1HC9 B;  4BIK B;  1KL8 A;  1LJZ A;  1NYU A;  1LX5 B;  2N99 A;  3BT1 U;  4QTI U;  1TXB A;  1KBA A;  4IYE A;  3HH7 A;  2L03 A;  1IDI A;  1CRE A;  1F94 A;  1FAS A;  1KXI A;  2PJY B;  5EBX A;  1S4Y A;  2H64 C;  1L4W A;  1CVO A;  1M9Z A;  1NYS A;  4OM5 A;  2CRS A;  2L5S A;  4XJJ A;  2J8B A;  1CCQ A;  1LXG A;  2ABX A;  1CXO A;  1CDT A;  4HQP F;  1HOY A;  1FSS B;  1QM7 A;  3NDS A;  1NEA A;  3FEV A;  1B41 B;  1LXH A;  2MHY A;  3U74 U;  1MAH F;  1G6M A;  1ERG A;  1COD A;  2I9B E;  2UWR A;  2ERA A;  1CRF A;  1F8U B;  3KFD E;  1CDS A;  1CB9 A;  5DU1 A;  4UY2 C;  5DZ5 A;  3U73 U;  2H7Z B;  1ES7 B;  1TGX A;  2UX2 A;  2GOO C;  2MFA A;  4FAO E;  1CTX A;  1HAJ A;  1CDQ A;  1NTN A; 
#chains in the Genus database with same CATH topology
 1QKE A;  1DRS A;  1ONJ A;  1KS6 A;  4EY8 B;  2CRT A;  2MJY A;  3PLC A;  4LFT A;  2BTX A;  2HLR A;  2CTX A;  2H5F A;  2MUP A;  2QJ9 C;  4AEA A;  1W6B A;  4RUD A;  1KBS A;  2JQP A;  4FAO C;  1IK8 A;  1PLO A;  1BXP A;  1LSI A;  1H0J A;  1NOR A;  2HLQ A;  4P7U A;  3VTS A;  1I02 A;  1TXA A;  1HC9 A;  1IDG A;  2MUO A;  6EBX A;  1BTE A;  1KBT A;  3KFD I;  4OM4 A;  3LAQ U;  1IQ9 A;  1FF4 A;  3NEQ A;  1TFS A;  1CXN A;  1REW C;  2NBT A;  1IKC A;  1JGK A;  1FFJ A;  1JBD A;  2H64 B;  2QC1 A;  1V6P A;  1UG4 A;  2K3G A;  2GOO B;  2X8B B;  2CCX A;  1KFH A;  3BT2 U;  1YWH A;  2FD6 U;  2JVE A;  4DO8 A;  1KTZ B;  2H8U A;  2CDX A;  2OFS A;  2QJA C;  1CDR A;  2H62 C;  5DO6 A;  1IJC A;  4ZQY A;  1NTX A;  1ABT A;  1IDL A;  5IMT D;  2PJY C;  1CHV S;  1RGJ A;  1IDH A;  2H62 D;  5IMY C;  1FRA A;  1NXB A;  1HAA A;  1KC4 A;  3QB4 B;  3EBX A;  2BHI A;  2QJB C;  1ERA A;  1JE9 A;  1XT3 A;  1ZAD A;  3ERA A;  1FSC A;  1MR6 A;  2LCR A;  3NH7 A;  2VLW A;  1VB0 A;  3EVS C;  1RL5 A;  2MJ0 A;  2H7Z A;  2LA1 A;  1QKD A;  2MJ4 A;  4BDT B;  1KU6 B;  1COE A;  1HC9 B;  4BIK B;  1KL8 A;  1LJZ A;  1NYU A;  1LX5 B;  2N99 A;  3BT1 U;  4QTI U;  1TXB A;  1KBA A;  4IYE A;  3HH7 A;  2L03 A;  1IDI A;  1CRE A;  1F94 A;  1FAS A;  1KXI A;  2PJY B;  5EBX A;  1S4Y A;  2H64 C;  1L4W A;  1CVO A;  1M9Z A;  1NYS A;  4OM5 A;  2CRS A;  2L5S A;  4XJJ A;  2J8B A;  1CCQ A;  1LXG A;  2ABX A;  1CXO A;  1CDT A;  4HQP F;  1HOY A;  1FSS B;  1QM7 A;  3NDS A;  1NEA A;  3FEV A;  1B41 B;  1LXH A;  2MHY A;  3U74 U;  1MAH F;  4KSN A;  1G6M A;  1ERG A;  1COD A;  2I9B E;  2UWR A;  2ERA A;  1CRF A;  1F8U B;  3KFD E;  1CDS A;  1CB9 A;  5DU1 A;  4UY2 C;  5DZ5 A;  3U73 U;  2H7Z B;  1ES7 B;  1TGX A;  2UX2 A;  2GOO C;  2MFA A;  4FAO E;  1CTX A;  1HAJ A;  1CDQ A;  1NTN A; 
#chains in the Genus database with same CATH homology
 1QKE A;  1DRS A;  1ONJ A;  1KS6 A;  4EY8 B;  2CRT A;  2MJY A;  3PLC A;  4LFT A;  2BTX A;  2HLR A;  2CTX A;  2H5F A;  2MUP A;  2QJ9 C;  4AEA A;  1W6B A;  4RUD A;  1KBS A;  2JQP A;  4FAO C;  1IK8 A;  1PLO A;  1BXP A;  1LSI A;  1H0J A;  1NOR A;  2HLQ A;  4P7U A;  3VTS A;  1I02 A;  1TXA A;  1HC9 A;  1IDG A;  2MUO A;  6EBX A;  1BTE A;  1KBT A;  3KFD I;  4OM4 A;  3LAQ U;  1IQ9 A;  1FF4 A;  3NEQ A;  1TFS A;  1CXN A;  1REW C;  2NBT A;  1IKC A;  1JGK A;  1FFJ A;  1JBD A;  2H64 B;  2QC1 A;  1V6P A;  1UG4 A;  2K3G A;  2GOO B;  2X8B B;  2CCX A;  1KFH A;  3BT2 U;  1YWH A;  2FD6 U;  2JVE A;  4DO8 A;  1KTZ B;  2H8U A;  2CDX A;  2OFS A;  2QJA C;  1CDR A;  2H62 C;  5DO6 A;  1IJC A;  4ZQY A;  1NTX A;  1ABT A;  1IDL A;  5IMT D;  2PJY C;  1CHV S;  1RGJ A;  1IDH A;  2H62 D;  5IMY C;  1FRA A;  1NXB A;  1HAA A;  1KC4 A;  3QB4 B;  3EBX A;  2BHI A;  2QJB C;  1ERA A;  1JE9 A;  1XT3 A;  1ZAD A;  3ERA A;  1FSC A;  1MR6 A;  2LCR A;  3NH7 A;  2VLW A;  1VB0 A;  3EVS C;  1RL5 A;  2MJ0 A;  2H7Z A;  2LA1 A;  1QKD A;  2MJ4 A;  4BDT B;  1KU6 B;  1COE A;  1HC9 B;  4BIK B;  1KL8 A;  1LJZ A;  1NYU A;  1LX5 B;  2N99 A;  3BT1 U;  4QTI U;  1TXB A;  1KBA A;  4IYE A;  3HH7 A;  2L03 A;  1IDI A;  1CRE A;  1F94 A;  1FAS A;  1KXI A;  2PJY B;  5EBX A;  1S4Y A;  2H64 C;  1L4W A;  1CVO A;  1M9Z A;  1NYS A;  4OM5 A;  2CRS A;  2L5S A;  4XJJ A;  2J8B A;  1CCQ A;  1LXG A;  2ABX A;  1CXO A;  1CDT A;  4HQP F;  1HOY A;  1FSS B;  1QM7 A;  3NDS A;  1NEA A;  3FEV A;  1B41 B;  1LXH A;  2MHY A;  3U74 U;  1MAH F;  4KSN A;  1G6M A;  1ERG A;  1COD A;  2I9B E;  2UWR A;  2ERA A;  1CRF A;  1F8U B;  3KFD E;  1CDS A;  1CB9 A;  5DU1 A;  4UY2 C;  5DZ5 A;  3U73 U;  2H7Z B;  1ES7 B;  1TGX A;  2UX2 A;  2GOO C;  2MFA A;  4FAO E;  1CTX A;  1HAJ A;  1CDQ A;  1NTN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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