1G73C

Crystal structure of smac bound to xiap-bir3 domain
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
89
structure length
89
Chain Sequence
LPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Apoptosis/apoptosis inhibitor
molecule keywords SECOND MITOCHONDRIA-DERIVED ACTIVATOR OF CASPASES
publication title Structural basis of IAP recognition by Smac/DIABLO.
pubmed doi rcsb
source organism Homo sapiens
total genus 21
structure length 89
sequence length 89
chains with identical sequence D
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2000-11-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00653 BIR Inhibitor of Apoptosis domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1170.10 Mainly Alpha Orthogonal Bundle Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 1g73C00
1XOXA 3UECA 3UIGA 5C3KA 1OXQA 2I3HA 3UIIA 3F7HA 5C7DA 4HY4A 1G73C 1OY7A 4MU7A 1C9QA 3HL5A 3UIJA 2JK7A 3GTAA 4A0IA 1I3OE 4KMNA 2OPZA 4WVSA 3G76A 5C7AA 5C3HA 4J3YA 1F9XA 3UEIA 3UEGA 4HY5A 1TFQA 4J47A 4A0JA 3UEFA 1F3HA 3UW4A 2OPYA 4J44A 1M4MA 4KJVA 2VM5A 4KJUA 1G3FA 3UIKA 3CLXA 1TW6A 1QBHA 2POPB 2POIA 3D9UA 3CM7A 5C0LA 5C83A 4KMPA 4WVUA 1TFTA 1JD5A 4LGEA 5C84A 4J46A 4J48A 1E31A 1XB1A 1XB0A 3M0AD 4EB9A 4J45A 3GT9A 2I3IA 1JD4A 5C0KA 4MTZA 3CM2A 1NW9A 3SIPE 2VSLA 4OXCA 4A0NA 3UW5A 1SDZA 2RAWA 3UIHA 4LGUA 5C7CA 2RAXA 1SE0A 3D9TA 3OZ1A 4HY0A 2QRAA 3SIQA 4EC4A 3M0DD 3EYLA 3F7GA 4WVTA 1JD6A 3T6PA 3UEDA 3M1DA 1Q4QA 3UEEA 2QFAA 2UVLA 1OXNA 4MTIA 3F7IA 5C7BA 3MUPA 3UEHA
chains in the Genus database with same CATH superfamily
1XOXA 3UECA 3UIGA 5C3KA 1OXQA 2I3HA 3UIIA 3F7HA 5C7DA 4HY4A 1G73C 1OY7A 4MU7A 1C9QA 3HL5A 3UIJA 2JK7A 3GTAA 4A0IA 1I3OE 4KMNA 2OPZA 4WVSA 3G76A 5C7AA 5C3HA 4J3YA 1F9XA 3UEIA 3UEGA 4HY5A 1TFQA 4J47A 4A0JA 3UEFA 1F3HA 3UW4A 2OPYA 4J44A 1M4MA 4KJVA 2VM5A 4KJUA 1G3FA 3UIKA 3CLXA 1TW6A 1QBHA 2POPB 2POIA 3D9UA 3CM7A 5C0LA 5C83A 4KMPA 4WVUA 1TFTA 1JD5A 4LGEA 5C84A 4J46A 4J48A 1E31A 1XB1A 1XB0A 3M0AD 4EB9A 4J45A 3GT9A 2I3IA 1JD4A 5C0KA 4MTZA 3CM2A 1NW9A 3SIPE 2VSLA 4OXCA 4A0NA 3UW5A 1SDZA 2RAWA 3UIHA 4LGUA 5C7CA 2RAXA 1SE0A 3D9TA 3OZ1A 4HY0A 2QRAA 3SIQA 4EC4A 3M0DD 3EYLA 3F7GA 4WVTA 1JD6A 3T6PA 3UEDA 3M1DA 1Q4QA 3UEEA 2QFAA 2UVLA 1OXNA 4MTIA 3F7IA 5C7BA 3MUPA 3UEHA
chains in the Genus database with same CATH topology
1XOXA 3UECA 3UIGA 5C3KA 1OXQA 2I3HA 3UIIA 3F7HA 5C7DA 4HY4A 1G73C 1OY7A 4MU7A 1C9QA 3HL5A 3UIJA 2JK7A 3GTAA 4A0IA 1I3OE 4KMNA 2OPZA 4WVSA 3G76A 5C7AA 5C3HA 4J3YA 1F9XA 3UEIA 3UEGA 4HY5A 1TFQA 4J47A 4A0JA 3UEFA 1F3HA 3UW4A 2OPYA 4J44A 1M4MA 4KJVA 2VM5A 4KJUA 1G3FA 3UIKA 3CLXA 1TW6A 1QBHA 2POPB 2POIA 3D9UA 3CM7A 5C0LA 5C83A 4KMPA 4WVUA 1TFTA 1JD5A 4LGEA 5C84A 4J46A 4J48A 1E31A 1XB1A 1XB0A 3M0AD 4EB9A 4J45A 3GT9A 2I3IA 1JD4A 5C0KA 4MTZA 3CM2A 1NW9A 3SIPE 2VSLA 4OXCA 4A0NA 3UW5A 1SDZA 2RAWA 3UIHA 4LGUA 5C7CA 2RAXA 1SE0A 3D9TA 3OZ1A 4HY0A 2QRAA 3SIQA 4EC4A 3M0DD 3EYLA 3F7GA 4WVTA 1JD6A 3T6PA 3UEDA 3M1DA 1Q4QA 3UEEA 2QFAA 2UVLA 1OXNA 4MTIA 3F7IA 5C7BA 3MUPA 3UEHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1XOX A;  3UEC A;  3UIG A;  5C3K A;  1OXQ A;  2I3H A;  3UII A;  3F7H A;  5C7D A;  4HY4 A;  1G73 C;  1OY7 A;  4MU7 A;  1C9Q A;  3HL5 A;  3UIJ A;  2JK7 A;  3GTA A;  4A0I A;  1I3O E;  4KMN A;  2OPZ A;  4WVS A;  3G76 A;  5C7A A;  5C3H A;  4J3Y A;  1F9X A;  3UEI A;  3UEG A;  4HY5 A;  1TFQ A;  4J47 A;  4A0J A;  3UEF A;  1F3H A;  3UW4 A;  2OPY A;  4J44 A;  1M4M A;  4KJV A;  2VM5 A;  4KJU A;  1G3F A;  3UIK A;  3CLX A;  1TW6 A;  1QBH A;  2POP B;  2POI A;  3D9U A;  3CM7 A;  5C0L A;  5C83 A;  4KMP A;  4WVU A;  1TFT A;  1JD5 A;  4LGE A;  5C84 A;  4J46 A;  4J48 A;  1E31 A;  1XB1 A;  1XB0 A;  3M0A D;  4EB9 A;  4J45 A;  3GT9 A;  2I3I A;  1JD4 A;  5C0K A;  4MTZ A;  3CM2 A;  1NW9 A;  3SIP E;  2VSL A;  4OXC A;  4A0N A;  3UW5 A;  1SDZ A;  2RAW A;  3UIH A;  4LGU A;  5C7C A;  2RAX A;  1SE0 A;  3D9T A;  3OZ1 A;  4HY0 A;  2QRA A;  3SIQ A;  4EC4 A;  3M0D D;  3EYL A;  3F7G A;  4WVT A;  1JD6 A;  3T6P A;  3UED A;  3M1D A;  1Q4Q A;  3UEE A;  2QFA A;  2UVL A;  1OXN A;  4MTI A;  3F7I A;  5C7B A;  3MUP A;  3UEH A; 
#chains in the Genus database with same CATH topology
 1XOX A;  3UEC A;  3UIG A;  5C3K A;  1OXQ A;  2I3H A;  3UII A;  3F7H A;  5C7D A;  4HY4 A;  1G73 C;  1OY7 A;  4MU7 A;  1C9Q A;  3HL5 A;  3UIJ A;  2JK7 A;  3GTA A;  4A0I A;  1I3O E;  4KMN A;  2OPZ A;  4WVS A;  3G76 A;  5C7A A;  5C3H A;  4J3Y A;  1F9X A;  3UEI A;  3UEG A;  4HY5 A;  1TFQ A;  4J47 A;  4A0J A;  3UEF A;  1F3H A;  3UW4 A;  2OPY A;  4J44 A;  1M4M A;  4KJV A;  2VM5 A;  4KJU A;  1G3F A;  3UIK A;  3CLX A;  1TW6 A;  1QBH A;  2POP B;  2POI A;  3D9U A;  3CM7 A;  5C0L A;  5C83 A;  4KMP A;  4WVU A;  1TFT A;  1JD5 A;  4LGE A;  5C84 A;  4J46 A;  4J48 A;  1E31 A;  1XB1 A;  1XB0 A;  3M0A D;  4EB9 A;  4J45 A;  3GT9 A;  2I3I A;  1JD4 A;  5C0K A;  4MTZ A;  3CM2 A;  1NW9 A;  3SIP E;  2VSL A;  4OXC A;  4A0N A;  3UW5 A;  1SDZ A;  2RAW A;  3UIH A;  4LGU A;  5C7C A;  2RAX A;  1SE0 A;  3D9T A;  3OZ1 A;  4HY0 A;  2QRA A;  3SIQ A;  4EC4 A;  3M0D D;  3EYL A;  3F7G A;  4WVT A;  1JD6 A;  3T6P A;  3UED A;  3M1D A;  1Q4Q A;  3UEE A;  2QFA A;  2UVL A;  1OXN A;  4MTI A;  3F7I A;  5C7B A;  3MUP A;  3UEH A; 
#chains in the Genus database with same CATH homology
 1XOX A;  3UEC A;  3UIG A;  5C3K A;  1OXQ A;  2I3H A;  3UII A;  3F7H A;  5C7D A;  4HY4 A;  1G73 C;  1OY7 A;  4MU7 A;  1C9Q A;  3HL5 A;  3UIJ A;  2JK7 A;  3GTA A;  4A0I A;  1I3O E;  4KMN A;  2OPZ A;  4WVS A;  3G76 A;  5C7A A;  5C3H A;  4J3Y A;  1F9X A;  3UEI A;  3UEG A;  4HY5 A;  1TFQ A;  4J47 A;  4A0J A;  3UEF A;  1F3H A;  3UW4 A;  2OPY A;  4J44 A;  1M4M A;  4KJV A;  2VM5 A;  4KJU A;  1G3F A;  3UIK A;  3CLX A;  1TW6 A;  1QBH A;  2POP B;  2POI A;  3D9U A;  3CM7 A;  5C0L A;  5C83 A;  4KMP A;  4WVU A;  1TFT A;  1JD5 A;  4LGE A;  5C84 A;  4J46 A;  4J48 A;  1E31 A;  1XB1 A;  1XB0 A;  3M0A D;  4EB9 A;  4J45 A;  3GT9 A;  2I3I A;  1JD4 A;  5C0K A;  4MTZ A;  3CM2 A;  1NW9 A;  3SIP E;  2VSL A;  4OXC A;  4A0N A;  3UW5 A;  1SDZ A;  2RAW A;  3UIH A;  4LGU A;  5C7C A;  2RAX A;  1SE0 A;  3D9T A;  3OZ1 A;  4HY0 A;  2QRA A;  3SIQ A;  4EC4 A;  3M0D D;  3EYL A;  3F7G A;  4WVT A;  1JD6 A;  3T6P A;  3UED A;  3M1D A;  1Q4Q A;  3UEE A;  2QFA A;  2UVL A;  1OXN A;  4MTI A;  3F7I A;  5C7B A;  3MUP A;  3UEH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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