The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
29
|
sequence length |
138
|
structure length |
138
|
Chain Sequence |
LRRRARLSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKEYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGALYKVKVYETDNNIVVYKGE
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Tetrahydrobiopterin biosynthesis
|
| molecule keywords |
6-PYRUVOYL TETRAHYDROPTERIN SYNTHASE
|
| publication title |
Three-dimensional structure of 6-pyruvoyl tetrahydropterin synthase, an enzyme involved in tetrahydrobiopterin biosynthesis.
pubmed rcsb |
| source organism |
Rattus rattus
|
| total genus |
29
|
| structure length |
138
|
| sequence length |
138
|
| chains with identical sequence |
B
|
| ec nomenclature |
ec
4.2.3.12: 6-pyruvoyltetrahydropterin synthase. |
| pdb deposition date | 1995-09-16 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01242 | PTPS | 6-pyruvoyl tetrahydropterin synthase |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 2-Layer Sandwich | Tetrahydropterin Synthase; Chain A | Tetrahydropterin Synthase; Chain A |
#chains in the Genus database with same CATH superfamily 3LZE A; 1B6Z A; 2G64 A; 2A0S A; 1GTQ A; 4NTK A; 4NTM A; 1Y13 A; 1B66 A; 3JYG A; 3D7J A; 3M0N A; 3QN0 A; 2DTT A; 2DJ6 A; 3LX3 A; 4NTN A; 3QN9 A; 3QNA A; 3I2B A; 2OBA A; #chains in the Genus database with same CATH topology 3BK6 A; 3LZE A; 1B6Z A; 4FVG A; 1AIP C; 1TFE A; 2G64 A; 2A0S A; 1GTQ A; 4Q7J A; 1XB2 B; 4NTK A; 4NTM A; 2RPB A; 1Y13 A; 1B66 A; 3JYG A; 1EFU B; 4FVJ A; 3D7J A; 3M0N A; 3QN0 A; 2DTT A; 2DJ6 A; 3LX3 A; 1WIN A; 4FVF A; 4NTN A; 3QN9 A; 3QNA A; 3I2B A; 2OBA A; #chains in the Genus database with same CATH homology 3BK6 A; 3LZE A; 1B6Z A; 4FVG A; 2G64 A; 2A0S A; 1GTQ A; 4NTK A; 4NTM A; 2RPB A; 1Y13 A; 1B66 A; 3JYG A; 4FVJ A; 3D7J A; 3M0N A; 3QN0 A; 2DTT A; 2DJ6 A; 3LX3 A; 1WIN A; 4FVF A; 4NTN A; 3QN9 A; 3QNA A; 3I2B A; 2OBA A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
