1GY0A

Crystal structure of the eucaryotic mono-adp-ribosyltransferase art2.2; crystal form c (p3121)
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
223
structure length
223
Chain Sequence
PLMLDTAPNAFDDQYEGCVNKMEEKAPLLLQEDFNMNAKLKVAWEEAKKRWNNIKPSRSYPKGFNDFHGTALVAYTGSIAVDFNRAVREFKENPGQFHYKAFHYYLTRALQLLSNGDCHSVYRGTKTRFHYTGAGSVRFGQFTSSSLSKKVAQSQEFFSDHGTLFIIKTCLGVYIKEFSFRPDQEEVLIPGYEVYQKVRTQGYNEIFLDSPKRKKSNYNCLYS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords T-CELL ECTO-ADP-RIBOSYLTRANSFERASE 2
publication title Structure of the Ecto-Adp-Ribosyl Transferase Art2.2 From Rat
pubmed doi rcsb
source organism Rattus norvegicus
total genus 69
structure length 223
sequence length 223
ec nomenclature ec 2.4.2.31: NAD(+)--protein-arginine ADP-ribosyltransferase.
pdb deposition date 2002-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01129 ART NAD:arginine ADP-ribosyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1gy0A00
1PWPA 5H03A 2A78B 1PWVA 1PWUA 4GY2A 4WF6A 3BUZA 2C8EE 1ZXVA 4PKWA 3BW8A 2WN8A 3NTSA 4XSHB 1QS2A 2C8FE 1YQYA 4XM6A 1R4BA 1GIQA 4DV8A 2WN6A 3U0JA 1OG4A 2C8BX 2WN5A 1PWQA 1GXZA 1OJQA 4GF1A 4H03A 4ELNA 4PKVA 2C8GA 2C8DA 4FXQA 4TR5A 2WN7A 2J3ZA 1G24A 5H04A 1OJZA 1GXYA 4H0VA 2C8AA 2GWMA 1GY0A 5D1UA 5D1SA 2J3XA 4FMLA 5GTTA 4H0XA 4XM7A 4XM8A 2C8CA 4PKSA 4H0TA 2GWLA 4H0YA 4PKRA 4PKQA 5DZQA 4PKTA 1QS1A 1UZIA 4FK7A 4XSGB 2A9KB 1OG1A 2J3VA 1JKYA 2C8HA 1GIRA 2C89A 5D1TA 1OG3A 1R45A 2WN4A 1PWWA 4PKUA 1J7NA 2BOVB 1GZEA 5BWMB 1GZFA
chains in the Genus database with same CATH superfamily
1PWPA 5H03A 2A78B 1PWVA 1PWUA 4GY2A 4WF6A 3BUZA 2C8EE 1ZXVA 4PKWA 3BW8A 2WN8A 3NTSA 4XSHB 1QS2A 2C8FE 1YQYA 4XM6A 1R4BA 1GIQA 4DV8A 2WN6A 3U0JA 1OG4A 2C8BX 2WN5A 1PWQA 1GXZA 1OJQA 4GF1A 4H03A 4ELNA 4PKVA 2C8GA 2C8DA 4FXQA 4TR5A 2WN7A 2J3ZA 1G24A 5H04A 1OJZA 1GXYA 4H0VA 2C8AA 2GWMA 1GY0A 5D1UA 5D1SA 2J3XA 4FMLA 5GTTA 4H0XA 4XM7A 4XM8A 2C8CA 4PKSA 4H0TA 2GWLA 4H0YA 4PKRA 4PKQA 5DZQA 4PKTA 1QS1A 1UZIA 4FK7A 4XSGB 2A9KB 1OG1A 2J3VA 1JKYA 2C8HA 1GIRA 2C89A 5D1TA 1OG3A 1R45A 2WN4A 1PWWA 4PKUA 1J7NA 2BOVB 1GZEA 5BWMB 1GZFA
chains in the Genus database with same CATH topology
1PWPA 5H03A 2A78B 1PWVA 1PWUA 4GY2A 4WF6A 3BUZA 2C8EE 1ZXVA 4PKWA 3BW8A 2WN8A 3NTSA 4XSHB 1QS2A 2C8FE 1YQYA 4XM6A 1R4BA 1GIQA 4DV8A 2WN6A 3U0JA 1OG4A 2C8BX 2WN5A 1PWQA 1GXZA 1OJQA 4GF1A 4H03A 4ELNA 4PKVA 2C8GA 2C8DA 4FXQA 4TR5A 2WN7A 2J3ZA 1G24A 5H04A 1OJZA 1GXYA 4H0VA 2C8AA 2GWMA 1GY0A 5D1UA 5D1SA 2J3XA 4FMLA 5GTTA 4H0XA 4XM7A 4XM8A 2C8CA 4PKSA 4H0TA 2GWLA 4H0YA 4PKRA 4PKQA 5DZQA 4PKTA 1QS1A 1UZIA 4FK7A 4XSGB 2A9KB 1OG1A 2J3VA 1JKYA 2C8HA 1GIRA 2C89A 5D1TA 1OG3A 1R45A 2WN4A 1PWWA 4PKUA 1J7NA 2BOVB 1GZEA 5BWMB 1GZFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1PWP A;  5H03 A;  2A78 B;  1PWV A;  1PWU A;  4GY2 A;  4WF6 A;  3BUZ A;  2C8E E;  1ZXV A;  4PKW A;  3BW8 A;  2WN8 A;  3NTS A;  4XSH B;  1QS2 A;  2C8F E;  1YQY A;  4XM6 A;  1R4B A;  1GIQ A;  4DV8 A;  2WN6 A;  3U0J A;  1OG4 A;  2C8B X;  2WN5 A;  1PWQ A;  1GXZ A;  1OJQ A;  4GF1 A;  4H03 A;  4ELN A;  4PKV A;  2C8G A;  2C8D A;  4FXQ A;  4TR5 A;  2WN7 A;  2J3Z A;  1G24 A;  5H04 A;  1OJZ A;  1GXY A;  4H0V A;  2C8A A;  2GWM A;  1GY0 A;  5D1U A;  5D1S A;  2J3X A;  4FML A;  5GTT A;  4H0X A;  4XM7 A;  4XM8 A;  2C8C A;  4PKS A;  4H0T A;  2GWL A;  4H0Y A;  4PKR A;  4PKQ A;  5DZQ A;  4PKT A;  1QS1 A;  1UZI A;  4FK7 A;  4XSG B;  2A9K B;  1OG1 A;  2J3V A;  1JKY A;  2C8H A;  1GIR A;  2C89 A;  5D1T A;  1OG3 A;  1R45 A;  2WN4 A;  1PWW A;  4PKU A;  1J7N A;  2BOV B;  1GZE A;  5BWM B;  1GZF A; 
#chains in the Genus database with same CATH topology
 1PWP A;  5H03 A;  2A78 B;  1PWV A;  1PWU A;  4GY2 A;  4WF6 A;  3BUZ A;  2C8E E;  1ZXV A;  4PKW A;  3BW8 A;  2WN8 A;  3NTS A;  4XSH B;  1QS2 A;  2C8F E;  1YQY A;  4XM6 A;  1R4B A;  1GIQ A;  4DV8 A;  2WN6 A;  3U0J A;  1OG4 A;  2C8B X;  2WN5 A;  1PWQ A;  1GXZ A;  1OJQ A;  4GF1 A;  4H03 A;  4ELN A;  4PKV A;  2C8G A;  2C8D A;  4FXQ A;  4TR5 A;  2WN7 A;  2J3Z A;  1G24 A;  5H04 A;  1OJZ A;  1GXY A;  4H0V A;  2C8A A;  2GWM A;  1GY0 A;  5D1U A;  5D1S A;  2J3X A;  4FML A;  5GTT A;  4H0X A;  4XM7 A;  4XM8 A;  2C8C A;  4PKS A;  4H0T A;  2GWL A;  4H0Y A;  4PKR A;  4PKQ A;  5DZQ A;  4PKT A;  1QS1 A;  1UZI A;  4FK7 A;  4XSG B;  2A9K B;  1OG1 A;  2J3V A;  1JKY A;  2C8H A;  1GIR A;  2C89 A;  5D1T A;  1OG3 A;  1R45 A;  2WN4 A;  1PWW A;  4PKU A;  1J7N A;  2BOV B;  1GZE A;  5BWM B;  1GZF A; 
#chains in the Genus database with same CATH homology
 1PWP A;  5H03 A;  2A78 B;  1PWV A;  1PWU A;  4GY2 A;  4WF6 A;  3BUZ A;  2C8E E;  1ZXV A;  4PKW A;  3BW8 A;  2WN8 A;  3NTS A;  4XSH B;  1QS2 A;  2C8F E;  1YQY A;  4XM6 A;  1R4B A;  1GIQ A;  4DV8 A;  2WN6 A;  3U0J A;  1OG4 A;  2C8B X;  2WN5 A;  1PWQ A;  1GXZ A;  1OJQ A;  4GF1 A;  4H03 A;  4ELN A;  4PKV A;  2C8G A;  2C8D A;  4FXQ A;  4TR5 A;  2WN7 A;  2J3Z A;  1G24 A;  5H04 A;  1OJZ A;  1GXY A;  4H0V A;  2C8A A;  2GWM A;  1GY0 A;  5D1U A;  5D1S A;  2J3X A;  4FML A;  5GTT A;  4H0X A;  4XM7 A;  4XM8 A;  2C8C A;  4PKS A;  4H0T A;  2GWL A;  4H0Y A;  4PKR A;  4PKQ A;  5DZQ A;  4PKT A;  1QS1 A;  1UZI A;  4FK7 A;  4XSG B;  2A9K B;  1OG1 A;  2J3V A;  1JKY A;  2C8H A;  1GIR A;  2C89 A;  5D1T A;  1OG3 A;  1R45 A;  2WN4 A;  1PWW A;  4PKU A;  1J7N A;  2BOV B;  1GZE A;  5BWM B;  1GZF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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