1GY0A

Crystal structure of the eucaryotic mono-adp-ribosyltransferase art2.2; crystal form c (p3121)
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
223
structure length
223
Chain Sequence
b'PLMLDTAPNAFDDQYEGCVNKMEEKAPLLLQEDFNMNAKLKVAWEEAKKRWNNIKPSRSYPKGFNDFHGTALVAYTGSIAVDFNRAVREFKENPGQFHYKAFHYYLTRALQLLSNGDCHSVYRGTKTRFHYTGAGSVRFGQFTSSSLSKKVAQSQEFFSDHGTLFIIKTCLGVYIKEFSFRPDQEEVLIPGYEVYQKVRTQGYNEIFLDSPKRKKSNYNCLYS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of the Ecto-Adp-Ribosyl Transferase Art2.2 From Rat
pubmed doi rcsb
molecule keywords T-CELL ECTO-ADP-RIBOSYLTRANSFERASE 2
source organism Rattus norvegicus
molecule tags Transferase
total genus 69
structure length 223
sequence length 223
ec nomenclature ec 2.4.2.31: NAD(+)--protein-arginine ADP-ribosyltransferase.
pdb deposition date 2002-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01129 ART NAD:arginine ADP-ribosyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1gy0A00
2C8EE 5H04A 5DZQA 1GY0A 4ELNA 1GXZA 1OJQA 2WN6A 1YQYA 2A9KB 2WN5A 4FXQA 1OG3A 1OJZA 1UZIA 1PWVA 5D1TA 2WN8A 1OG1A 3NTSA 4TR5A 1PWWA 1GZFA 1PWUA 3BW8A 4FK7A 4H0VA 1ZXVA 2C8FE 2J3VA 4H0TA 2C8GA 5D1SA 2BOVB 4DV8A 4XM8A 3BUZA 4PKVA 2WN7A 1GIQA 1GXYA 2C8AA 1GZEA 4XM7A 1JKYA 2GWLA 4PKSA 1GIRA 1QS1A 4WF6A 4H0YA 5GTTA 2A78B 4PKWA 4XSGB 4PKQA 2C8HA 4GY2A 4XM6A 1PWPA 1QS2A 1OG4A 2C8DA 2C8CA 4PKUA 4H03A 2WN4A 4PKTA 1PWQA 4GF1A 5D1UA 2J3ZA 1R45A 4XSHB 1J7NA 2J3XA 2C8BX 4PKRA 1G24A 4H0XA 5H03A 3U0JA 4FMLA 2C89A 2GWMA 1R4BA 5BWMB
chains in the Genus database with same CATH superfamily
2C8EE 5H04A 5DZQA 1GY0A 4ELNA 1GXZA 1OJQA 2WN6A 1YQYA 2A9KB 2WN5A 4FXQA 1OG3A 1OJZA 1UZIA 1PWVA 5D1TA 2WN8A 1OG1A 3NTSA 4TR5A 1PWWA 1GZFA 1PWUA 3BW8A 4FK7A 4H0VA 1ZXVA 2C8FE 2J3VA 4H0TA 2C8GA 5D1SA 2BOVB 4DV8A 4XM8A 3BUZA 4PKVA 2WN7A 1GIQA 1GXYA 2C8AA 1GZEA 4XM7A 1JKYA 2GWLA 4PKSA 1GIRA 1QS1A 4WF6A 4H0YA 5GTTA 2A78B 4PKWA 4XSGB 4PKQA 2C8HA 4GY2A 4XM6A 1PWPA 1QS2A 1OG4A 2C8DA 2C8CA 4PKUA 4H03A 2WN4A 4PKTA 1PWQA 4GF1A 5D1UA 2J3ZA 1R45A 4XSHB 1J7NA 2J3XA 2C8BX 4PKRA 1G24A 4H0XA 5H03A 3U0JA 4FMLA 2C89A 2GWMA 1R4BA 5BWMB
chains in the Genus database with same CATH topology
2C8EE 5H04A 5DZQA 1GY0A 4ELNA 1GXZA 1OJQA 2WN6A 1YQYA 2A9KB 2WN5A 4FXQA 1OG3A 1OJZA 1UZIA 1PWVA 5D1TA 2WN8A 1OG1A 3NTSA 4TR5A 1PWWA 1GZFA 1PWUA 3BW8A 4FK7A 4H0VA 1ZXVA 2C8FE 2J3VA 4H0TA 2C8GA 5D1SA 2BOVB 4DV8A 4XM8A 3BUZA 4PKVA 2WN7A 1GIQA 1GXYA 2C8AA 1GZEA 4XM7A 1JKYA 2GWLA 4PKSA 1GIRA 1QS1A 4WF6A 4H0YA 5GTTA 2A78B 4PKWA 4XSGB 4PKQA 2C8HA 4GY2A 4XM6A 1PWPA 1QS2A 1OG4A 2C8DA 2C8CA 4PKUA 4H03A 2WN4A 4PKTA 1PWQA 4GF1A 5D1UA 2J3ZA 1R45A 4XSHB 1J7NA 2J3XA 2C8BX 4PKRA 1G24A 4H0XA 5H03A 3U0JA 4FMLA 2C89A 2GWMA 1R4BA 5BWMB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2C8E E;  5H04 A;  5DZQ A;  1GY0 A;  4ELN A;  1GXZ A;  1OJQ A;  2WN6 A;  1YQY A;  2A9K B;  2WN5 A;  4FXQ A;  1OG3 A;  1OJZ A;  1UZI A;  1PWV A;  5D1T A;  2WN8 A;  1OG1 A;  3NTS A;  4TR5 A;  1PWW A;  1GZF A;  1PWU A;  3BW8 A;  4FK7 A;  4H0V A;  1ZXV A;  2C8F E;  2J3V A;  4H0T A;  2C8G A;  5D1S A;  2BOV B;  4DV8 A;  4XM8 A;  3BUZ A;  4PKV A;  2WN7 A;  1GIQ A;  1GXY A;  2C8A A;  1GZE A;  4XM7 A;  1JKY A;  2GWL A;  4PKS A;  1GIR A;  1QS1 A;  4WF6 A;  4H0Y A;  5GTT A;  2A78 B;  4PKW A;  4XSG B;  4PKQ A;  2C8H A;  4GY2 A;  4XM6 A;  1PWP A;  1QS2 A;  1OG4 A;  2C8D A;  2C8C A;  4PKU A;  4H03 A;  2WN4 A;  4PKT A;  1PWQ A;  4GF1 A;  5D1U A;  2J3Z A;  1R45 A;  4XSH B;  1J7N A;  2J3X A;  2C8B X;  4PKR A;  1G24 A;  4H0X A;  5H03 A;  3U0J A;  4FML A;  2C89 A;  2GWM A;  1R4B A;  5BWM B; 
#chains in the Genus database with same CATH topology
 2C8E E;  5H04 A;  5DZQ A;  1GY0 A;  4ELN A;  1GXZ A;  1OJQ A;  2WN6 A;  1YQY A;  2A9K B;  2WN5 A;  4FXQ A;  1OG3 A;  1OJZ A;  1UZI A;  1PWV A;  5D1T A;  2WN8 A;  1OG1 A;  3NTS A;  4TR5 A;  1PWW A;  1GZF A;  1PWU A;  3BW8 A;  4FK7 A;  4H0V A;  1ZXV A;  2C8F E;  2J3V A;  4H0T A;  2C8G A;  5D1S A;  2BOV B;  4DV8 A;  4XM8 A;  3BUZ A;  4PKV A;  2WN7 A;  1GIQ A;  1GXY A;  2C8A A;  1GZE A;  4XM7 A;  1JKY A;  2GWL A;  4PKS A;  1GIR A;  1QS1 A;  4WF6 A;  4H0Y A;  5GTT A;  2A78 B;  4PKW A;  4XSG B;  4PKQ A;  2C8H A;  4GY2 A;  4XM6 A;  1PWP A;  1QS2 A;  1OG4 A;  2C8D A;  2C8C A;  4PKU A;  4H03 A;  2WN4 A;  4PKT A;  1PWQ A;  4GF1 A;  5D1U A;  2J3Z A;  1R45 A;  4XSH B;  1J7N A;  2J3X A;  2C8B X;  4PKR A;  1G24 A;  4H0X A;  5H03 A;  3U0J A;  4FML A;  2C89 A;  2GWM A;  1R4B A;  5BWM B; 
#chains in the Genus database with same CATH homology
 2C8E E;  5H04 A;  5DZQ A;  1GY0 A;  4ELN A;  1GXZ A;  1OJQ A;  2WN6 A;  1YQY A;  2A9K B;  2WN5 A;  4FXQ A;  1OG3 A;  1OJZ A;  1UZI A;  1PWV A;  5D1T A;  2WN8 A;  1OG1 A;  3NTS A;  4TR5 A;  1PWW A;  1GZF A;  1PWU A;  3BW8 A;  4FK7 A;  4H0V A;  1ZXV A;  2C8F E;  2J3V A;  4H0T A;  2C8G A;  5D1S A;  2BOV B;  4DV8 A;  4XM8 A;  3BUZ A;  4PKV A;  2WN7 A;  1GIQ A;  1GXY A;  2C8A A;  1GZE A;  4XM7 A;  1JKY A;  2GWL A;  4PKS A;  1GIR A;  1QS1 A;  4WF6 A;  4H0Y A;  5GTT A;  2A78 B;  4PKW A;  4XSG B;  4PKQ A;  2C8H A;  4GY2 A;  4XM6 A;  1PWP A;  1QS2 A;  1OG4 A;  2C8D A;  2C8C A;  4PKU A;  4H03 A;  2WN4 A;  4PKT A;  1PWQ A;  4GF1 A;  5D1U A;  2J3Z A;  1R45 A;  4XSH B;  1J7N A;  2J3X A;  2C8B X;  4PKR A;  1G24 A;  4H0X A;  5H03 A;  3U0J A;  4FML A;  2C89 A;  2GWM A;  1R4B A;  5BWM B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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