1GY0A

Crystal structure of the eucaryotic mono-adp-ribosyltransferase art2.2; crystal form c (p3121)
Total Genus 69
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
223
structure length
223
Chain Sequence
PLMLDTAPNAFDDQYEGCVNKMEEKAPLLLQEDFNMNAKLKVAWEEAKKRWNNIKPSRSYPKGFNDFHGTALVAYTGSIAVDFNRAVREFKENPGQFHYKAFHYYLTRALQLLSNGDCHSVYRGTKTRFHYTGAGSVRFGQFTSSSLSKKVAQSQEFFSDHGTLFIIKTCLGVYIKEFSFRPDQEEVLIPGYEVYQKVRTQGYNEIFLDSPKRKKSNYNCLYS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
source organism Rattus norvegicus
publication title Structure of the Ecto-Adp-Ribosyl Transferase Art2.2 From Rat
pubmed doi rcsb
molecule keywords T-CELL ECTO-ADP-RIBOSYLTRANSFERASE 2
total genus 69
structure length 223
sequence length 223
ec nomenclature ec 2.4.2.31: NAD(+)--protein-arginine ADP-ribosyltransferase.
pdb deposition date 2002-04-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01129 ART NAD:arginine ADP-ribosyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 1gy0A00
4FMLA 4PKUA 1YQYA 4XM7A 1PWUA 2C8FE 1GIRA 1J7NA 4WF6A 2GWLA 2WN4A 2A9KB 2J3XA 3NTSA 4XM6A 1OG3A 4PKQA 1PWPA 4FXQA 4PKSA 5H03A 1OJZA 2C8BX 2C8EE 5D1TA 4DV8A 4FK7A 1OJQA 5D1SA 5D1UA 1ZXVA 2WN5A 2C8CA 4ELNA 1GY0A 5DZQA 5GTTA 1UZIA 2J3VA 2GWMA 4GF1A 1GZEA 1GZFA 2WN8A 3BW8A 4TR5A 1G24A 2C8HA 1OG1A 2J3ZA 2WN7A 1PWWA 1JKYA 4H0XA 5H04A 5BWMB 4PKRA 4PKTA 2C8AA 2C8DA 1GXZA 1OG4A 1GXYA 1PWVA 2BOVB 4H0VA 4GY2A 4XM8A 4H03A 1QS1A 1R4BA 3BUZA 4XSGB 3U0JA 2WN6A 4XSHB 1GIQA 2A78B 4PKWA 1QS2A 2C8GA 4PKVA 4H0TA 1R45A 4H0YA 1PWQA 2C89A
chains in the Genus database with same CATH superfamily
4FMLA 4PKUA 1YQYA 4XM7A 1PWUA 2C8FE 1GIRA 1J7NA 4WF6A 2GWLA 2WN4A 2A9KB 2J3XA 3NTSA 4XM6A 1OG3A 4PKQA 1PWPA 4FXQA 4PKSA 5H03A 1OJZA 2C8BX 2C8EE 5D1TA 4DV8A 4FK7A 1OJQA 5D1SA 5D1UA 1ZXVA 2WN5A 2C8CA 4ELNA 1GY0A 5DZQA 5GTTA 1UZIA 2J3VA 2GWMA 4GF1A 1GZEA 1GZFA 2WN8A 3BW8A 4TR5A 1G24A 2C8HA 1OG1A 2J3ZA 2WN7A 1PWWA 1JKYA 4H0XA 5H04A 5BWMB 4PKRA 4PKTA 2C8AA 2C8DA 1GXZA 1OG4A 1GXYA 1PWVA 2BOVB 4H0VA 4GY2A 4XM8A 4H03A 1QS1A 1R4BA 3BUZA 4XSGB 3U0JA 2WN6A 4XSHB 1GIQA 2A78B 4PKWA 1QS2A 2C8GA 4PKVA 4H0TA 1R45A 4H0YA 1PWQA 2C89A
chains in the Genus database with same CATH topology
4FMLA 4PKUA 1YQYA 4XM7A 1PWUA 2C8FE 1GIRA 1J7NA 4WF6A 2GWLA 2WN4A 2A9KB 2J3XA 3NTSA 4XM6A 1OG3A 4PKQA 1PWPA 4FXQA 4PKSA 5H03A 1OJZA 2C8BX 2C8EE 5D1TA 4DV8A 4FK7A 1OJQA 5D1SA 5D1UA 1ZXVA 2WN5A 2C8CA 4ELNA 1GY0A 5DZQA 5GTTA 1UZIA 2J3VA 2GWMA 4GF1A 1GZEA 1GZFA 2WN8A 3BW8A 4TR5A 1G24A 2C8HA 1OG1A 2J3ZA 2WN7A 1PWWA 1JKYA 4H0XA 5H04A 5BWMB 4PKRA 4PKTA 2C8AA 2C8DA 1GXZA 1OG4A 1GXYA 1PWVA 2BOVB 4H0VA 4GY2A 4XM8A 4H03A 1QS1A 1R4BA 3BUZA 4XSGB 3U0JA 2WN6A 4XSHB 1GIQA 2A78B 4PKWA 1QS2A 2C8GA 4PKVA 4H0TA 1R45A 4H0YA 1PWQA 2C89A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FML A;  4PKU A;  1YQY A;  4XM7 A;  1PWU A;  2C8F E;  1GIR A;  1J7N A;  4WF6 A;  2GWL A;  2WN4 A;  2A9K B;  2J3X A;  3NTS A;  4XM6 A;  1OG3 A;  4PKQ A;  1PWP A;  4FXQ A;  4PKS A;  5H03 A;  1OJZ A;  2C8B X;  2C8E E;  5D1T A;  4DV8 A;  4FK7 A;  1OJQ A;  5D1S A;  5D1U A;  1ZXV A;  2WN5 A;  2C8C A;  4ELN A;  1GY0 A;  5DZQ A;  5GTT A;  1UZI A;  2J3V A;  2GWM A;  4GF1 A;  1GZE A;  1GZF A;  2WN8 A;  3BW8 A;  4TR5 A;  1G24 A;  2C8H A;  1OG1 A;  2J3Z A;  2WN7 A;  1PWW A;  1JKY A;  4H0X A;  5H04 A;  5BWM B;  4PKR A;  4PKT A;  2C8A A;  2C8D A;  1GXZ A;  1OG4 A;  1GXY A;  1PWV A;  2BOV B;  4H0V A;  4GY2 A;  4XM8 A;  4H03 A;  1QS1 A;  1R4B A;  3BUZ A;  4XSG B;  3U0J A;  2WN6 A;  4XSH B;  1GIQ A;  2A78 B;  4PKW A;  1QS2 A;  2C8G A;  4PKV A;  4H0T A;  1R45 A;  4H0Y A;  1PWQ A;  2C89 A; 
#chains in the Genus database with same CATH topology
 4FML A;  4PKU A;  1YQY A;  4XM7 A;  1PWU A;  2C8F E;  1GIR A;  1J7N A;  4WF6 A;  2GWL A;  2WN4 A;  2A9K B;  2J3X A;  3NTS A;  4XM6 A;  1OG3 A;  4PKQ A;  1PWP A;  4FXQ A;  4PKS A;  5H03 A;  1OJZ A;  2C8B X;  2C8E E;  5D1T A;  4DV8 A;  4FK7 A;  1OJQ A;  5D1S A;  5D1U A;  1ZXV A;  2WN5 A;  2C8C A;  4ELN A;  1GY0 A;  5DZQ A;  5GTT A;  1UZI A;  2J3V A;  2GWM A;  4GF1 A;  1GZE A;  1GZF A;  2WN8 A;  3BW8 A;  4TR5 A;  1G24 A;  2C8H A;  1OG1 A;  2J3Z A;  2WN7 A;  1PWW A;  1JKY A;  4H0X A;  5H04 A;  5BWM B;  4PKR A;  4PKT A;  2C8A A;  2C8D A;  1GXZ A;  1OG4 A;  1GXY A;  1PWV A;  2BOV B;  4H0V A;  4GY2 A;  4XM8 A;  4H03 A;  1QS1 A;  1R4B A;  3BUZ A;  4XSG B;  3U0J A;  2WN6 A;  4XSH B;  1GIQ A;  2A78 B;  4PKW A;  1QS2 A;  2C8G A;  4PKV A;  4H0T A;  1R45 A;  4H0Y A;  1PWQ A;  2C89 A; 
#chains in the Genus database with same CATH homology
 4FML A;  4PKU A;  1YQY A;  4XM7 A;  1PWU A;  2C8F E;  1GIR A;  1J7N A;  4WF6 A;  2GWL A;  2WN4 A;  2A9K B;  2J3X A;  3NTS A;  4XM6 A;  1OG3 A;  4PKQ A;  1PWP A;  4FXQ A;  4PKS A;  5H03 A;  1OJZ A;  2C8B X;  2C8E E;  5D1T A;  4DV8 A;  4FK7 A;  1OJQ A;  5D1S A;  5D1U A;  1ZXV A;  2WN5 A;  2C8C A;  4ELN A;  1GY0 A;  5DZQ A;  5GTT A;  1UZI A;  2J3V A;  2GWM A;  4GF1 A;  1GZE A;  1GZF A;  2WN8 A;  3BW8 A;  4TR5 A;  1G24 A;  2C8H A;  1OG1 A;  2J3Z A;  2WN7 A;  1PWW A;  1JKY A;  4H0X A;  5H04 A;  5BWM B;  4PKR A;  4PKT A;  2C8A A;  2C8D A;  1GXZ A;  1OG4 A;  1GXY A;  1PWV A;  2BOV B;  4H0V A;  4GY2 A;  4XM8 A;  4H03 A;  1QS1 A;  1R4B A;  3BUZ A;  4XSG B;  3U0J A;  2WN6 A;  4XSH B;  1GIQ A;  2A78 B;  4PKW A;  1QS2 A;  2C8G A;  4PKV A;  4H0T A;  1R45 A;  4H0Y A;  1PWQ A;  2C89 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...