1H4KX

Sulfurtransferase from azotobacter vinelandii in complex with hypophosphite
Total Genus 94
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
94
sequence length
271
structure length
271
Chain Sequence
MDDFASLPLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords SULFURTRANSFERASE
publication title A Persulfurated Cysteine Promotes Active Site Reactivity in Azotobacter Vinelandii Rhodanse
pubmed doi rcsb
source organism Azotobacter vinelandii
total genus 94
structure length 271
sequence length 271
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 2001-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1h4kX02
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1h4kX01
2VSWA 2JTSA 1GN0A 2WLXA 3IPPA 3FS5A 5HBOA 3ICRA 1URHA 2JTQA 3NT6A 3TG3A 3NTDA 1YS0A 3FNJA 3I3UA 1CWSA 3D1PA 5HBPA 1TQ1A 1VEEA 3G5JA 3OP3A 1YMKA 3NHVA 1OKGA 1C25A 3UTNX 3OLHA 1H4KX 1E0CA 1UARA 2HHGA 4OCGA 2MOLA 2A2KA 3ICTA 3R2UA 3GK5A 5LAMA 4F67A 1H4MX 1YMLA 2J6PA 2EG4B 3FOJA 3FLHA 2EG3A 2K0ZA 3ICSA 2UZQA 2EG4A 5HPAA 4WH9A 1CWTA 2JTRA 1YM9A 1RHDA 3IPOA 2ORAA 2WLRA 3AAYA 3ILMA 1CWRA 2DCQA 3O3WA 1RHSA 1BOIA 1WHBA 3P3AA 3NTAA 2KL3A 3K9RA 2MOIA 3HWIA 2MRMA 2FSXA 3IWHA 3HZUA 4JGTA 5HBQA 2OUCA 2IFDA 3F4AA 1QB0A 3HIXA 1QXNA 3MZZA 2IFVA 3I2VA 1ORBA 5LAOA 4WH7A 1HZMA 1BOHA 3TG1B 1YMDA 2GWFA 3AAXA 1GMXA 1YT8A 1T3KA 5HBLA 1DP2A 1WV9A 3TP9A
chains in the Genus database with same CATH superfamily
2VSWA 2JTSA 1GN0A 2WLXA 3IPPA 3FS5A 5HBOA 3ICRA 1URHA 2JTQA 3NT6A 3TG3A 3NTDA 1YS0A 3FNJA 3I3UA 1CWSA 3D1PA 5HBPA 1TQ1A 1VEEA 3G5JA 3OP3A 1YMKA 3NHVA 1OKGA 1C25A 3UTNX 3OLHA 1H4KX 1E0CA 1UARA 2HHGA 4OCGA 2MOLA 2A2KA 3ICTA 3R2UA 3GK5A 5LAMA 4F67A 1H4MX 1YMLA 2J6PA 2EG4B 3FOJA 3FLHA 2EG3A 2K0ZA 3ICSA 2UZQA 2EG4A 5HPAA 4WH9A 1CWTA 2JTRA 1YM9A 1RHDA 3IPOA 2ORAA 2WLRA 3AAYA 3ILMA 1CWRA 2Q82A 2DCQA 3O3WA 1RHSA 1BOIA 1WHBA 3P3AA 3NTAA 2KL3A 3K9RA 2MOIA 3HWIA 2MRMA 2FSXA 3IWHA 3HZUA 4JGTA 5HBQA 2OUCA 2IFDA 3F4AA 1QB0A 3HIXA 1QXNA 3MZZA 2IFVA 3I2VA 1ORBA 5LAOA 4WH7A 1HZMA 1BOHA 3TG1B 1YMDA 2GWFA 3AAXA 1GMXA 1YT8A 1T3KA 5HBLA 1DP2A 1WV9A 3TP9A
chains in the Genus database with same CATH topology
2VSWA 2JTSA 1GN0A 2WLXA 3IPPA 3FS5A 5HBOA 3ICRA 1URHA 2JTQA 3NT6A 3TG3A 3NTDA 1YS0A 3FNJA 3I3UA 1CWSA 3D1PA 5HBPA 1TQ1A 1VEEA 3G5JA 3OP3A 1YMKA 3NHVA 1OKGA 1C25A 3UTNX 3OLHA 1H4KX 1E0CA 1UARA 2HHGA 4OCGA 2MOLA 2A2KA 3ICTA 3R2UA 3GK5A 5LAMA 4F67A 1H4MX 1YMLA 2J6PA 2EG4B 3FOJA 3FLHA 2EG3A 2K0ZA 3ICSA 2UZQA 2EG4A 5HPAA 4WH9A 1CWTA 2JTRA 1YM9A 1RHDA 3IPOA 2ORAA 2WLRA 3AAYA 3ILMA 1CWRA 2DCQA 3O3WA 1RHSA 1BOIA 1WHBA 3P3AA 3NTAA 2KL3A 3K9RA 2MOIA 3HWIA 2MRMA 2FSXA 3IWHA 3HZUA 4JGTA 5HBQA 2OUCA 2IFDA 3F4AA 1QB0A 3HIXA 1QXNA 3MZZA 2IFVA 3I2VA 1ORBA 5LAOA 4WH7A 1HZMA 1BOHA 3TG1B 1YMDA 2GWFA 3AAXA 1GMXA 1YT8A 1T3KA 5HBLA 1DP2A 1WV9A 3TP9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VSW A;  2JTS A;  1GN0 A;  2WLX A;  3IPP A;  3FS5 A;  5HBO A;  3ICR A;  1URH A;  2JTQ A;  3NT6 A;  3TG3 A;  3NTD A;  1YS0 A;  3FNJ A;  3I3U A;  1CWS A;  3D1P A;  5HBP A;  1TQ1 A;  1VEE A;  3G5J A;  3OP3 A;  1YMK A;  3NHV A;  1OKG A;  1C25 A;  3UTN X;  3OLH A;  1H4K X;  1E0C A;  1UAR A;  2HHG A;  4OCG A;  2MOL A;  2A2K A;  3ICT A;  3R2U A;  3GK5 A;  5LAM A;  4F67 A;  1H4M X;  1YML A;  2J6P A;  2EG4 B;  3FOJ A;  3FLH A;  2EG3 A;  2K0Z A;  3ICS A;  2UZQ A;  2EG4 A;  5HPA A;  4WH9 A;  1CWT A;  2JTR A;  1YM9 A;  1RHD A;  3IPO A;  2ORA A;  2WLR A;  3AAY A;  3ILM A;  1CWR A;  2DCQ A;  3O3W A;  1RHS A;  1BOI A;  1WHB A;  3P3A A;  3NTA A;  2KL3 A;  3K9R A;  2MOI A;  3HWI A;  2MRM A;  2FSX A;  3IWH A;  3HZU A;  4JGT A;  5HBQ A;  2OUC A;  2IFD A;  3F4A A;  1QB0 A;  3HIX A;  1QXN A;  3MZZ A;  2IFV A;  3I2V A;  1ORB A;  5LAO A;  4WH7 A;  1HZM A;  1BOH A;  3TG1 B;  1YMD A;  2GWF A;  3AAX A;  1GMX A;  1YT8 A;  1T3K A;  5HBL A;  1DP2 A;  1WV9 A;  3TP9 A; 
#chains in the Genus database with same CATH topology
 2VSW A;  2JTS A;  1GN0 A;  2WLX A;  3IPP A;  3FS5 A;  5HBO A;  3ICR A;  1URH A;  2JTQ A;  3NT6 A;  3TG3 A;  3NTD A;  1YS0 A;  3FNJ A;  3I3U A;  1CWS A;  3D1P A;  5HBP A;  1TQ1 A;  1VEE A;  3G5J A;  3OP3 A;  1YMK A;  3NHV A;  1OKG A;  1C25 A;  3UTN X;  3OLH A;  1H4K X;  1E0C A;  1UAR A;  2HHG A;  4OCG A;  2MOL A;  2A2K A;  3ICT A;  3R2U A;  3GK5 A;  5LAM A;  4F67 A;  1H4M X;  1YML A;  2J6P A;  2EG4 B;  3FOJ A;  3FLH A;  2EG3 A;  2K0Z A;  3ICS A;  2UZQ A;  2EG4 A;  5HPA A;  4WH9 A;  1CWT A;  2JTR A;  1YM9 A;  1RHD A;  3IPO A;  2ORA A;  2WLR A;  3AAY A;  3ILM A;  1CWR A;  2Q82 A;  2DCQ A;  3O3W A;  1RHS A;  1BOI A;  1WHB A;  3P3A A;  3NTA A;  2KL3 A;  3K9R A;  2MOI A;  3HWI A;  2MRM A;  2FSX A;  3IWH A;  3HZU A;  4JGT A;  5HBQ A;  2OUC A;  2IFD A;  3F4A A;  1QB0 A;  3HIX A;  1QXN A;  3MZZ A;  2IFV A;  3I2V A;  1ORB A;  5LAO A;  4WH7 A;  1HZM A;  1BOH A;  3TG1 B;  1YMD A;  2GWF A;  3AAX A;  1GMX A;  1YT8 A;  1T3K A;  5HBL A;  1DP2 A;  1WV9 A;  3TP9 A; 
#chains in the Genus database with same CATH homology
 2VSW A;  2JTS A;  1GN0 A;  2WLX A;  3IPP A;  3FS5 A;  5HBO A;  3ICR A;  1URH A;  2JTQ A;  3NT6 A;  3TG3 A;  3NTD A;  1YS0 A;  3FNJ A;  3I3U A;  1CWS A;  3D1P A;  5HBP A;  1TQ1 A;  1VEE A;  3G5J A;  3OP3 A;  1YMK A;  3NHV A;  1OKG A;  1C25 A;  3UTN X;  3OLH A;  1H4K X;  1E0C A;  1UAR A;  2HHG A;  4OCG A;  2MOL A;  2A2K A;  3ICT A;  3R2U A;  3GK5 A;  5LAM A;  4F67 A;  1H4M X;  1YML A;  2J6P A;  2EG4 B;  3FOJ A;  3FLH A;  2EG3 A;  2K0Z A;  3ICS A;  2UZQ A;  2EG4 A;  5HPA A;  4WH9 A;  1CWT A;  2JTR A;  1YM9 A;  1RHD A;  3IPO A;  2ORA A;  2WLR A;  3AAY A;  3ILM A;  1CWR A;  2DCQ A;  3O3W A;  1RHS A;  1BOI A;  1WHB A;  3P3A A;  3NTA A;  2KL3 A;  3K9R A;  2MOI A;  3HWI A;  2MRM A;  2FSX A;  3IWH A;  3HZU A;  4JGT A;  5HBQ A;  2OUC A;  2IFD A;  3F4A A;  1QB0 A;  3HIX A;  1QXN A;  3MZZ A;  2IFV A;  3I2V A;  1ORB A;  5LAO A;  4WH7 A;  1HZM A;  1BOH A;  3TG1 B;  1YMD A;  2GWF A;  3AAX A;  1GMX A;  1YT8 A;  1T3K A;  5HBL A;  1DP2 A;  1WV9 A;  3TP9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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