1H4MX

Sulfurtransferase from azotobacter vinelandii in complex with phosphate
Total Genus 91
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
91
sequence length
271
structure length
271
Chain Sequence
MDDFASLPLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords PUTATIVE THIOSULFATE SULFURTRANSFERASE
publication title A Persulfurated Cysteine Promotes Active Site Reactivity in Azotobacter Vinelandii Rhodanse
pubmed doi rcsb
source organism Azotobacter vinelandii
total genus 91
structure length 271
sequence length 271
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 2001-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1h4mX02
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 1h4mX01
1DP2A 2WLRA 2JTRA 1H4KX 3ICSA 3IWHA 3OLHA 2J6PA 1YMKA 2HHGA 1QB0A 3FLHA 2MOLA 2K0ZA 3I3UA 2UZQA 1QXNA 1VEEA 3G5JA 3O3WA 3ILMA 5HBOA 1CWSA 2IFDA 1E0CA 3K9RA 2JTQA 4JGTA 2VSWA 1URHA 3GK5A 3AAYA 3HIXA 1BOIA 2MRMA 1YMLA 1UARA 2DCQA 1H4MX 3I2VA 3NT6A 3FNJA 2KL3A 3NTAA 3F4AA 2GWFA 5HBQA 5HPAA 3TG1B 3IPPA 3ICTA 1T3KA 5HBLA 2EG4B 1C25A 1RHSA 2WLXA 3IPOA 5HBPA 3HWIA 1YS0A 3D1PA 3MZZA 3UTNX 2A2KA 1ORBA 4OCGA 2OUCA 3HZUA 2MOIA 5LAMA 4F67A 1GMXA 5LAOA 3P3AA 1CWTA 3AAXA 2JTSA 1RHDA 3NHVA 3NTDA 1BOHA 3OP3A 1TQ1A 4WH7A 3R2UA 1YT8A 4WH9A 1WV9A 2FSXA 1YM9A 1WHBA 1OKGA 1YMDA 3TG3A 3TP9A 1CWRA 3FS5A 3ICRA 2ORAA 2IFVA 1HZMA 2EG4A 2EG3A 3FOJA 1GN0A
chains in the Genus database with same CATH superfamily
1DP2A 2WLRA 2JTRA 1H4KX 3ICSA 3IWHA 3OLHA 2J6PA 1YMKA 2HHGA 1QB0A 3FLHA 2MOLA 2K0ZA 2Q82A 3I3UA 2UZQA 1QXNA 1VEEA 3G5JA 3O3WA 3ILMA 5HBOA 1CWSA 2IFDA 1E0CA 3K9RA 2JTQA 4JGTA 2VSWA 1URHA 3GK5A 3AAYA 3HIXA 1BOIA 2MRMA 1YMLA 1UARA 2DCQA 1H4MX 3I2VA 3NT6A 3FNJA 2KL3A 3NTAA 3F4AA 2GWFA 5HBQA 5HPAA 3TG1B 3IPPA 3ICTA 1T3KA 5HBLA 2EG4B 1C25A 1RHSA 2WLXA 3IPOA 5HBPA 3HWIA 1YS0A 3D1PA 3MZZA 3UTNX 2A2KA 1ORBA 4OCGA 2OUCA 3HZUA 2MOIA 5LAMA 4F67A 1GMXA 5LAOA 3P3AA 1CWTA 3AAXA 2JTSA 1RHDA 3NHVA 3NTDA 1BOHA 3OP3A 1TQ1A 4WH7A 3R2UA 1YT8A 4WH9A 1WV9A 2FSXA 1YM9A 1WHBA 1OKGA 1YMDA 3TG3A 3TP9A 1CWRA 3FS5A 3ICRA 2ORAA 2IFVA 1HZMA 2EG4A 2EG3A 3FOJA 1GN0A
chains in the Genus database with same CATH topology
1DP2A 2WLRA 2JTRA 1H4KX 3ICSA 3IWHA 3OLHA 2J6PA 1YMKA 2HHGA 1QB0A 3FLHA 2MOLA 2K0ZA 3I3UA 2UZQA 1QXNA 1VEEA 3G5JA 3O3WA 3ILMA 5HBOA 1CWSA 2IFDA 1E0CA 3K9RA 2JTQA 4JGTA 2VSWA 1URHA 3GK5A 3AAYA 3HIXA 1BOIA 2MRMA 1YMLA 1UARA 2DCQA 1H4MX 3I2VA 3NT6A 3FNJA 2KL3A 3NTAA 3F4AA 2GWFA 5HBQA 5HPAA 3TG1B 3IPPA 3ICTA 1T3KA 5HBLA 2EG4B 1C25A 1RHSA 2WLXA 3IPOA 5HBPA 3HWIA 1YS0A 3D1PA 3MZZA 3UTNX 2A2KA 1ORBA 4OCGA 2OUCA 3HZUA 2MOIA 5LAMA 4F67A 1GMXA 5LAOA 3P3AA 1CWTA 3AAXA 2JTSA 1RHDA 3NHVA 3NTDA 1BOHA 3OP3A 1TQ1A 4WH7A 3R2UA 1YT8A 4WH9A 1WV9A 2FSXA 1YM9A 1WHBA 1OKGA 1YMDA 3TG3A 3TP9A 1CWRA 3FS5A 3ICRA 2ORAA 2IFVA 1HZMA 2EG4A 2EG3A 3FOJA 1GN0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DP2 A;  2WLR A;  2JTR A;  1H4K X;  3ICS A;  3IWH A;  3OLH A;  2J6P A;  1YMK A;  2HHG A;  1QB0 A;  3FLH A;  2MOL A;  2K0Z A;  3I3U A;  2UZQ A;  1QXN A;  1VEE A;  3G5J A;  3O3W A;  3ILM A;  5HBO A;  1CWS A;  2IFD A;  1E0C A;  3K9R A;  2JTQ A;  4JGT A;  2VSW A;  1URH A;  3GK5 A;  3AAY A;  3HIX A;  1BOI A;  2MRM A;  1YML A;  1UAR A;  2DCQ A;  1H4M X;  3I2V A;  3NT6 A;  3FNJ A;  2KL3 A;  3NTA A;  3F4A A;  2GWF A;  5HBQ A;  5HPA A;  3TG1 B;  3IPP A;  3ICT A;  1T3K A;  5HBL A;  2EG4 B;  1C25 A;  1RHS A;  2WLX A;  3IPO A;  5HBP A;  3HWI A;  1YS0 A;  3D1P A;  3MZZ A;  3UTN X;  2A2K A;  1ORB A;  4OCG A;  2OUC A;  3HZU A;  2MOI A;  5LAM A;  4F67 A;  1GMX A;  5LAO A;  3P3A A;  1CWT A;  3AAX A;  2JTS A;  1RHD A;  3NHV A;  3NTD A;  1BOH A;  3OP3 A;  1TQ1 A;  4WH7 A;  3R2U A;  1YT8 A;  4WH9 A;  1WV9 A;  2FSX A;  1YM9 A;  1WHB A;  1OKG A;  1YMD A;  3TG3 A;  3TP9 A;  1CWR A;  3FS5 A;  3ICR A;  2ORA A;  2IFV A;  1HZM A;  2EG4 A;  2EG3 A;  3FOJ A;  1GN0 A; 
#chains in the Genus database with same CATH topology
 1DP2 A;  2WLR A;  2JTR A;  1H4K X;  3ICS A;  3IWH A;  3OLH A;  2J6P A;  1YMK A;  2HHG A;  1QB0 A;  3FLH A;  2MOL A;  2K0Z A;  2Q82 A;  3I3U A;  2UZQ A;  1QXN A;  1VEE A;  3G5J A;  3O3W A;  3ILM A;  5HBO A;  1CWS A;  2IFD A;  1E0C A;  3K9R A;  2JTQ A;  4JGT A;  2VSW A;  1URH A;  3GK5 A;  3AAY A;  3HIX A;  1BOI A;  2MRM A;  1YML A;  1UAR A;  2DCQ A;  1H4M X;  3I2V A;  3NT6 A;  3FNJ A;  2KL3 A;  3NTA A;  3F4A A;  2GWF A;  5HBQ A;  5HPA A;  3TG1 B;  3IPP A;  3ICT A;  1T3K A;  5HBL A;  2EG4 B;  1C25 A;  1RHS A;  2WLX A;  3IPO A;  5HBP A;  3HWI A;  1YS0 A;  3D1P A;  3MZZ A;  3UTN X;  2A2K A;  1ORB A;  4OCG A;  2OUC A;  3HZU A;  2MOI A;  5LAM A;  4F67 A;  1GMX A;  5LAO A;  3P3A A;  1CWT A;  3AAX A;  2JTS A;  1RHD A;  3NHV A;  3NTD A;  1BOH A;  3OP3 A;  1TQ1 A;  4WH7 A;  3R2U A;  1YT8 A;  4WH9 A;  1WV9 A;  2FSX A;  1YM9 A;  1WHB A;  1OKG A;  1YMD A;  3TG3 A;  3TP9 A;  1CWR A;  3FS5 A;  3ICR A;  2ORA A;  2IFV A;  1HZM A;  2EG4 A;  2EG3 A;  3FOJ A;  1GN0 A; 
#chains in the Genus database with same CATH homology
 1DP2 A;  2WLR A;  2JTR A;  1H4K X;  3ICS A;  3IWH A;  3OLH A;  2J6P A;  1YMK A;  2HHG A;  1QB0 A;  3FLH A;  2MOL A;  2K0Z A;  3I3U A;  2UZQ A;  1QXN A;  1VEE A;  3G5J A;  3O3W A;  3ILM A;  5HBO A;  1CWS A;  2IFD A;  1E0C A;  3K9R A;  2JTQ A;  4JGT A;  2VSW A;  1URH A;  3GK5 A;  3AAY A;  3HIX A;  1BOI A;  2MRM A;  1YML A;  1UAR A;  2DCQ A;  1H4M X;  3I2V A;  3NT6 A;  3FNJ A;  2KL3 A;  3NTA A;  3F4A A;  2GWF A;  5HBQ A;  5HPA A;  3TG1 B;  3IPP A;  3ICT A;  1T3K A;  5HBL A;  2EG4 B;  1C25 A;  1RHS A;  2WLX A;  3IPO A;  5HBP A;  3HWI A;  1YS0 A;  3D1P A;  3MZZ A;  3UTN X;  2A2K A;  1ORB A;  4OCG A;  2OUC A;  3HZU A;  2MOI A;  5LAM A;  4F67 A;  1GMX A;  5LAO A;  3P3A A;  1CWT A;  3AAX A;  2JTS A;  1RHD A;  3NHV A;  3NTD A;  1BOH A;  3OP3 A;  1TQ1 A;  4WH7 A;  3R2U A;  1YT8 A;  4WH9 A;  1WV9 A;  2FSX A;  1YM9 A;  1WHB A;  1OKG A;  1YMD A;  3TG3 A;  3TP9 A;  1CWR A;  3FS5 A;  3ICR A;  2ORA A;  2IFV A;  1HZM A;  2EG4 A;  2EG3 A;  3FOJ A;  1GN0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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