1H5OA

Solution structure of crotamine, a neurotoxin from crotalus durissus terrificus
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
42
structure length
42
Chain Sequence
YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords MYOTOXIN
publication title Solution Structure of Crotamine, a Na+ Channel Affecting Toxin from Crotalus Durissus Terrificus Venom
pubmed doi rcsb
total genus 7
structure length 42
sequence length 42
ec nomenclature
pdb deposition date 2001-05-23
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.20.10 Mainly Beta Single Sheet Anthopleurin-A Anthopleurin-A 1h5oA00
1ATXA 1WXNA 1ZUEA 1APFA 2MN3A 2MUBA 1ZLHB 2SH1A 1H5OA 1D6BA 2K2XA 2BDSA 3LMSB 2H9XA 1ZUFA 2JTOA 1BDSA 1WQKA 1B8WA 1AHLA 1SHIA 1SH1A 1Z99A 2RNGA 4GV5A 3D4UB 1ZLIB
chains in the Genus database with same CATH superfamily
1ATXA 1WXNA 1EL6A 1ZUEA 1APFA 2HJEA 2IKDA 2DLAA 2MN3A 2MUBA 3MCXA 1ZLHB 2SH1A 4YIRA 3C38A 3C30A 2XXLA 1H5OA 1D6BA 2K2XA 2BDSA 3LMSB 2H9XA 1ZUFA 2IKEA 2JTOA 3KEZA 2B9KA 1BDSA 3MYVA 1WQKA 1ZHHB 1B8WA 2QSFA 3IF4A 1AHLA 1GL9B 1SHIA 2HJ9C 1SH1A 1GKUB 1Z99A 2JR3A 2RNGA 4GV5A 2QSGA 3D4UB 2QSHA 1ZLIB
chains in the Genus database with same CATH topology
1ATXA 1WXNA 1ZUEA 1APFA 2HJEA 2IKDA 2DLAA 2MN3A 2MUBA 3MCXA 1ZLHB 2SH1A 4YIRA 3C38A 3C30A 2XXLA 1H5OA 1D6BA 2K2XA 2BDSA 3LMSB 2H9XA 1ZUFA 2IKEA 2JTOA 3KEZA 2B9KA 1BDSA 3MYVA 1WQKA 1ZHHB 1B8WA 2QSFA 1AHLA 1SHIA 2HJ9C 1SH1A 1Z99A 2JR3A 2RNGA 4GV5A 2QSGA 3D4UB 2QSHA 1ZLIB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ATX A;  1WXN A;  1ZUE A;  1APF A;  2MN3 A;  2MUB A;  1ZLH B;  2SH1 A;  1H5O A;  1D6B A;  2K2X A;  2BDS A;  3LMS B;  2H9X A;  1ZUF A;  2JTO A;  1BDS A;  1WQK A;  1B8W A;  1AHL A;  1SHI A;  1SH1 A;  1Z99 A;  2RNG A;  4GV5 A;  3D4U B;  1ZLI B; 
#chains in the Genus database with same CATH topology
 1ATX A;  1WXN A;  1EL6 A;  1ZUE A;  1APF A;  2HJE A;  2IKD A;  2DLA A;  2MN3 A;  2MUB A;  3MCX A;  1ZLH B;  2SH1 A;  4YIR A;  3C38 A;  3C30 A;  2XXL A;  1H5O A;  1D6B A;  2K2X A;  2BDS A;  3LMS B;  2H9X A;  1ZUF A;  2IKE A;  2JTO A;  3KEZ A;  2B9K A;  1BDS A;  3MYV A;  1WQK A;  1ZHH B;  1B8W A;  2QSF A;  3IF4 A;  1AHL A;  1GL9 B;  1SHI A;  2HJ9 C;  1SH1 A;  1GKU B;  1Z99 A;  2JR3 A;  2RNG A;  4GV5 A;  2QSG A;  3D4U B;  2QSH A;  1ZLI B; 
#chains in the Genus database with same CATH homology
 1ATX A;  1WXN A;  1ZUE A;  1APF A;  2HJE A;  2IKD A;  2DLA A;  2MN3 A;  2MUB A;  3MCX A;  1ZLH B;  2SH1 A;  4YIR A;  3C38 A;  3C30 A;  2XXL A;  1H5O A;  1D6B A;  2K2X A;  2BDS A;  3LMS B;  2H9X A;  1ZUF A;  2IKE A;  2JTO A;  3KEZ A;  2B9K A;  1BDS A;  3MYV A;  1WQK A;  1ZHH B;  1B8W A;  2QSF A;  1AHL A;  1SHI A;  2HJ9 C;  1SH1 A;  1Z99 A;  2JR3 A;  2RNG A;  4GV5 A;  2QSG A;  3D4U B;  2QSH A;  1ZLI B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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