1HF2A

Crystal structure of the bacterial cell-division inhibitor minc from t. maritima
Total Genus 57
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
57
sequence length
206
structure length
196
Chain Sequence
b'MVDFKMTKEGLVLLIKDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEVSQILVGKVQSRTTVESTGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEGGQAVVAALDLQTSLIQIAGFITHSKGEENVPSIAHVKGNRIVIEPFDKVSF'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords SEPTUM SITE-DETERMINING PROTEIN MINC
publication title Crystal Structure of the Bacterial Cell-Division Inhibitor Minc
pubmed doi rcsb
source organism Thermotoga maritima
molecule tags Cell division protein
total genus 57
structure length 196
sequence length 206
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2000-11-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03775 MinC_C Septum formation inhibitor MinC, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.70 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 1hf2A02
3.30.750.50 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA Cell-division inhibitor MinC, N-terminal domain 1hf2A01
4V02C 1K8FA 2BX6A 1KQ5A 2B0RA 1HF2A 3BH7B 2YUHA 3BH6B 1K4ZA
chains in the Genus database with same CATH superfamily
4KH3A 2DXLA 4NK8A 1BUZA 2XTWA 4Z05A 2O1DA 1IB4A 5C1EA 4OPWA 2IQ7A 4U49A 3DORA 4XL9A 1L1IA 1PE9A 2O0WA 1WMRA 3EQOA 1OFLA 1K8FA 3GVLA 4YEIA 3ZXNA 2IOUG 1IDJA 4YCQA 3LKLA 4DMGA 1CZFA 1OFEA 2EWEA 3C0KA 4XLFA 1TYXA 2INUA 2BX6A 1X0CA 4XNFA 4C2LA 1N6FA 1LLWA 2QY1A 2VBKA 3LYCA 2ODLA 4XR6A 3ZPPA 1O8IA 2X85A 2DXNA 1LLZA 2YUHA 3AGEA 1K32A 1FCFA 4XM3A 3ML3A 1CLWA 1LM1A 4MXNA 1FC7A 1TYWA 1O8LA 4YZXA 1QCXA 2QZAA 4YC5A 3SZEA 3JU4A 3GQ7A 4XKVA 3AK5A 3GRHA 3IHAA 2VJIA 1HF2A 3F43A 2KLNA 3DU1X 1QA1A 5EUSA 3IF5A 1IA5A 2XT4A 2NTQA 1VC1A 4AEJA 3NAWA 3DJAA 1FC6A 4QTPA 4HYLA 4HWVA 1AIRA 3IHBA 1GQ8A 1OOCA 5EUXA 5JLVC 4Z03A 1QQ1A 2VFNA 3UW0A 1KCCA 4XMYA 2VBMA 2QXZA 4OJPA 3N6ZA 2NT9A 2NT6A 2KA5A 4JC0A 2BSPA 5EUWA 1O8FA 2NTBA 4OZZA 2NZMA 1EE6A 3GQAA 4YEJA 3T9GA 4L1CA 2X3HA 3GMFA 2NTPA 3PSZA 3SYJA 4W8TA 2ZOAA 1BHEA 1O8KA 1QA2A 4DGFA 1IDKA 4YFOA 1THNB 1V0FA 3GHFA 3MOGA 3QDQA 4XONA 2VFOA 2J8IA 2O17A 3VMWA 3NY7A 2VFQA 1RWRA 2VFMA 1OGOX 1NHCA 2QYUA 1H4YA 1WXRA 1OGMX 3N90A 2BM5A 3KRGA 1OFMA 3V97A 4XLCA 2B78A 4OM9A 2NSPA 4W8QA 1O8MA 3BH7B 2XT2A 1EA0A 4U4BA 3B8YA 2O6WA 3T6OA 3K50A 1RU4A 3IH9A 3SY2A 4XS5A 3TH0A 2VFPA 4Z06A 2INVA 1O88A 3BH6B 1O8HA 1H4ZA 5EUZA 2VJJA 3GVJA 1QA3A 1HG8A 3DUPA 4URRA 1H4XA 2PECA 2XC1A 4PMHA 4OJ5A 1QJVA 1JTAA 2O04A 2UVFA 1BPLA 3B4NA 2VBEA 4DGHA 4NK6A 4YZAA 4OJOA 1SBOA 3VSEA 1JRGA 5EZBA 4OJ6A 1O8GA 3GK7A 3ZSCA 4YZQA 1RMGA 5DNSA 3D03A 1OFDA 1DABA 1O8EA 4XN3A 1O8JA 1DBGA 5AMVA 1N6EA 1PXZA 2PYHA 4AE2A 1K4ZA 2QX3A 1PLUA 1KCDA 4MR0A 3VSVA 3IH8A 3D3UA 1TH8B 5JMCB 1QRBA 3EH7A 2BM4A 3PETA 1K5CA 2XTYA 4XKWA 4HIZA 1H80A 4W8RA 3VSUA 3WWGA 1QRCA 2X6WA 2W7ZA 1FC9A 4XOPA 1WXXA 2NSTA 4JRAC 3LMWA 2CWWA 3V8VA 1KTWA 2UVEA 3GQ9A 1AUZA 1J7XA 3LLOA 3JURA 1TILB 4OJLA 4XORA 1KQ5A 2XTXA 1WXWA 3P4GA 4OZYA 1VBLA 3H09A 3AGDA 2J8KA 1XG2A 4I84A 4XQFA 3B90A 4L8KA 1DBOA 4XLEA 3JX8A 2OASA 4AVZA 3MGLA 2O0VA 3LDFA 1TSPA 3RIQA 2ZO9B 1TIDB 3FY3A 2RRLA 4V02C 3VSTA 4YZ0A 2BM6A 4EW9A 5C1CA 3GQ8A 1N6DA 3SUCA 1T6RA 5EUUA 3PSSA 2B0RA 2BM7A 3SQVA 3LJYA 3OIRA 2PYGA 4YDTA 1EZGA 1TYVA 3OIZA 3VMVA 4XLAA 4XN0A 2F3LA 3GVKA 3NB2A 3EQNA 1V0EA 1BN8A 2X6YA 4W8SA 4GHNA 2V5IA 2X6XA 2G0YA 4YELA 4XOTA 4XLHA 1O8DA 3ZTBA 2VY9A 2AS0A 1TYUA 2Z8GA
chains in the Genus database with same CATH topology
4KH3A 4V02C 3N90A 2BM5A 2IOUG 3ML3A 1CLWA 4OJ6A 3TH0A 2VFQA 1QRCA 1HF2A 2W7ZA 2VFPA 3H09A 2BM6A 2XC1A 1QA1A 4OM9A 1TYWA 5JLVC 1QQ1A 2VFNA 3P4GA 4OPWA 3SYJA 1TYXA 2B0RA 4JRAC 2BM7A 3BH6B 4OJ5A 3SZEA 3JX8A 2V5IA 3LJYA 5JMCB 1DABA 4OJPA 1QA2A 3N6ZA 2G0YA 2BX6A 1TYVA 2VFMA 1QRBA 3BH7B 3LYCA 2BM4A 1TYUA 3PETA 4OJLA 1K8FA 3AK5A 1TSPA 3RIQA 1KQ5A 4OJOA 1QA3A 2YUHA 2VFOA 1K4ZA 1WXRA 2F3LA 2J8IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4V02 C;  1K8F A;  2BX6 A;  1KQ5 A;  2B0R A;  1HF2 A;  3BH7 B;  2YUH A;  3BH6 B;  1K4Z A; 
#chains in the Genus database with same CATH topology
 4KH3 A;  2DXL A;  4NK8 A;  1BUZ A;  2XTW A;  4Z05 A;  2O1D A;  1IB4 A;  5C1E A;  4OPW A;  2IQ7 A;  4U49 A;  3DOR A;  4XL9 A;  1L1I A;  1PE9 A;  2O0W A;  1WMR A;  3EQO A;  1OFL A;  1K8F A;  3GVL A;  4YEI A;  3ZXN A;  2IOU G;  1IDJ A;  4YCQ A;  3LKL A;  4DMG A;  1CZF A;  1OFE A;  2EWE A;  3C0K A;  4XLF A;  1TYX A;  2INU A;  2BX6 A;  1X0C A;  4XNF A;  4C2L A;  1N6F A;  1LLW A;  2QY1 A;  2VBK A;  3LYC A;  2ODL A;  4XR6 A;  3ZPP A;  1O8I A;  2X85 A;  2DXN A;  1LLZ A;  2YUH A;  3AGE A;  1K32 A;  1FCF A;  4XM3 A;  3ML3 A;  1CLW A;  1LM1 A;  4MXN A;  1FC7 A;  1TYW A;  1O8L A;  4YZX A;  1QCX A;  2QZA A;  4YC5 A;  3SZE A;  3JU4 A;  3GQ7 A;  4XKV A;  3AK5 A;  3GRH A;  3IHA A;  2VJI A;  1HF2 A;  3F43 A;  2KLN A;  3DU1 X;  1QA1 A;  5EUS A;  3IF5 A;  1IA5 A;  2XT4 A;  2NTQ A;  1VC1 A;  4AEJ A;  3NAW A;  3DJA A;  1FC6 A;  4QTP A;  4HYL A;  4HWV A;  1AIR A;  3IHB A;  1GQ8 A;  1OOC A;  5EUX A;  5JLV C;  4Z03 A;  1QQ1 A;  2VFN A;  3UW0 A;  1KCC A;  4XMY A;  2VBM A;  2QXZ A;  4OJP A;  3N6Z A;  2NT9 A;  2NT6 A;  2KA5 A;  4JC0 A;  2BSP A;  5EUW A;  1O8F A;  2NTB A;  4OZZ A;  2NZM A;  1EE6 A;  3GQA A;  4YEJ A;  3T9G A;  4L1C A;  2X3H A;  3GMF A;  2NTP A;  3PSZ A;  3SYJ A;  4W8T A;  2ZOA A;  1BHE A;  1O8K A;  1QA2 A;  4DGF A;  1IDK A;  4YFO A;  1THN B;  1V0F A;  3GHF A;  3MOG A;  3QDQ A;  4XON A;  2VFO A;  2J8I A;  2O17 A;  3VMW A;  3NY7 A;  2VFQ A;  1RWR A;  2VFM A;  1OGO X;  1NHC A;  2QYU A;  1H4Y A;  1WXR A;  1OGM X;  3N90 A;  2BM5 A;  3KRG A;  1OFM A;  3V97 A;  4XLC A;  2B78 A;  4OM9 A;  2NSP A;  4W8Q A;  1O8M A;  3BH7 B;  2XT2 A;  1EA0 A;  4U4B A;  3B8Y A;  2O6W A;  3T6O A;  3K50 A;  1RU4 A;  3IH9 A;  3SY2 A;  4XS5 A;  3TH0 A;  2VFP A;  4Z06 A;  2INV A;  1O88 A;  3BH6 B;  1O8H A;  1H4Z A;  5EUZ A;  2VJJ A;  3GVJ A;  1QA3 A;  1HG8 A;  3DUP A;  4URR A;  1H4X A;  2PEC A;  2XC1 A;  4PMH A;  4OJ5 A;  1QJV A;  1JTA A;  2O04 A;  2UVF A;  1BPL A;  3B4N A;  2VBE A;  4DGH A;  4NK6 A;  4YZA A;  4OJO A;  1SBO A;  3VSE A;  1JRG A;  5EZB A;  4OJ6 A;  1O8G A;  3GK7 A;  3ZSC A;  4YZQ A;  1RMG A;  5DNS A;  3D03 A;  1OFD A;  1DAB A;  1O8E A;  4XN3 A;  1O8J A;  1DBG A;  5AMV A;  1N6E A;  1PXZ A;  2PYH A;  4AE2 A;  1K4Z A;  2QX3 A;  1PLU A;  1KCD A;  4MR0 A;  3VSV A;  3IH8 A;  3D3U A;  1TH8 B;  5JMC B;  1QRB A;  3EH7 A;  2BM4 A;  3PET A;  1K5C A;  2XTY A;  4XKW A;  4HIZ A;  1H80 A;  4W8R A;  3VSU A;  3WWG A;  1QRC A;  2X6W A;  2W7Z A;  1FC9 A;  4XOP A;  1WXX A;  2NST A;  4JRA C;  3LMW A;  2CWW A;  3V8V A;  1KTW A;  2UVE A;  3GQ9 A;  1AUZ A;  1J7X A;  3LLO A;  3JUR A;  1TIL B;  4OJL A;  4XOR A;  1KQ5 A;  2XTX A;  1WXW A;  3P4G A;  4OZY A;  1VBL A;  3H09 A;  3AGD A;  2J8K A;  1XG2 A;  4I84 A;  4XQF A;  3B90 A;  4L8K A;  1DBO A;  4XLE A;  3JX8 A;  2OAS A;  4AVZ A;  3MGL A;  2O0V A;  3LDF A;  1TSP A;  3RIQ A;  2ZO9 B;  1TID B;  3FY3 A;  2RRL A;  4V02 C;  3VST A;  4YZ0 A;  2BM6 A;  4EW9 A;  5C1C A;  3GQ8 A;  1N6D A;  3SUC A;  1T6R A;  5EUU A;  3PSS A;  2B0R A;  2BM7 A;  3SQV A;  3LJY A;  3OIR A;  2PYG A;  4YDT A;  1EZG A;  1TYV A;  3OIZ A;  3VMV A;  4XLA A;  4XN0 A;  2F3L A;  3GVK A;  3NB2 A;  3EQN A;  1V0E A;  1BN8 A;  2X6Y A;  4W8S A;  4GHN A;  2V5I A;  2X6X A;  2G0Y A;  4YEL A;  4XOT A;  4XLH A;  1O8D A;  3ZTB A;  2VY9 A;  2AS0 A;  1TYU A;  2Z8G A; 
#chains in the Genus database with same CATH homology
 4KH3 A;  4V02 C;  3N90 A;  2BM5 A;  2IOU G;  3ML3 A;  1CLW A;  4OJ6 A;  3TH0 A;  2VFQ A;  1QRC A;  1HF2 A;  2W7Z A;  2VFP A;  3H09 A;  2BM6 A;  2XC1 A;  1QA1 A;  4OM9 A;  1TYW A;  5JLV C;  1QQ1 A;  2VFN A;  3P4G A;  4OPW A;  3SYJ A;  1TYX A;  2B0R A;  4JRA C;  2BM7 A;  3BH6 B;  4OJ5 A;  3SZE A;  3JX8 A;  2V5I A;  3LJY A;  5JMC B;  1DAB A;  4OJP A;  1QA2 A;  3N6Z A;  2G0Y A;  2BX6 A;  1TYV A;  2VFM A;  1QRB A;  3BH7 B;  3LYC A;  2BM4 A;  1TYU A;  3PET A;  4OJL A;  1K8F A;  3AK5 A;  1TSP A;  3RIQ A;  1KQ5 A;  4OJO A;  1QA3 A;  2YUH A;  2VFO A;  1K4Z A;  1WXR A;  2F3L A;  2J8I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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