1HF2A

Crystal structure of the bacterial cell-division inhibitor minc from t. maritima
Total Genus 57
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
57
sequence length
206
structure length
196
Chain Sequence
MVDFKMTKEGLVLLIKDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEVSQILVGKVQSRTTVESTGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEGGQAVVAALDLQTSLIQIAGFITHSKGEENVPSIAHVKGNRIVIEPFDKVSF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of the Bacterial Cell-Division Inhibitor Minc
pubmed doi rcsb
source organism Thermotoga maritima
molecule tags Cell division protein
molecule keywords SEPTUM SITE-DETERMINING PROTEIN MINC
total genus 57
structure length 196
sequence length 206
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2000-11-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03775 MinC_C Septum formation inhibitor MinC, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.70 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 1hf2A02
3.30.750.50 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA Cell-division inhibitor MinC, N-terminal domain 1hf2A01
1HF2A 1K8FA 4V02C 1KQ5A 2BX6A 3BH6B 1K4ZA 2YUHA 3BH7B 2B0RA
chains in the Genus database with same CATH superfamily
1AUZA 4YELA 2VFNA 4L8KA 4DMGA 1QA3A 3IF5A 2O6WA 2Z8GA 1CZFA 3SUCA 1OFMA 3LDFA 2B78A 2PYGA 2VFMA 2X3HA 3GVLA 2PECA 3P4GA 3V8VA 1HF2A 3N6ZA 3B8YA 1OFDA 1O8JA 4URRA 2NTPA 2BM5A 1WMRA 3EQNA 2PYHA 3GQ9A 3LKLA 1O8HA 2NSPA 1EA0A 3VSTA 4YFOA 4XN3A 2ZO9B 1TYUA 1O8DA 4AEJA 1QCXA 4EW9A 3NB2A 1WXWA 4I84A 1KQ5A 3QDQA 2YUHA 2NSTA 2QYUA 1WXRA 1N6DA 2F3LA 2UVEA 3PSZA 3IHAA 1AIRA 4V02C 1IB4A 2RRLA 3KRGA 3ZXNA 1RU4A 1KCDA 4XS5A 2BSPA 2BX6A 2XTYA 1K4ZA 1WXXA 1K32A 1TYVA 4U4BA 1DABA 1PLUA 4GHNA 1EZGA 1KTWA 3ZTBA 5EUSA 5EUZA 4YEJA 2VBEA 1K5CA 3GQ7A 1K8FA 1IDJA 1H4YA 2W7ZA 4Z05A 2NZMA 4Z03A 3VSEA 1RWRA 4W8RA 2XT4A 4YC5A 3SZEA 3IH9A 1RMGA 4OJ6A 2KA5A 3EH7A 1TH8B 3IHBA 3JU4A 2BM7A 4XR6A 1XG2A 2G0YA 1SBOA 2J8IA 2XTXA 2IOUG 1X0CA 1BPLA 1FC9A 4YCQA 1V0EA 3B4NA 3VSUA 1TIDB 3DUPA 1H4XA 2XTWA 2DXNA 3SQVA 3DJAA 1V0FA 2KLNA 5DNSA 3AGDA 3TH0A 1OFEA 4JC0A 2VFPA 1FC7A 2QX3A 2NT9A 2V5IA 4HWVA 4AE2A 1OGOX 2X85A 2O0WA 3DORA 5AMVA 2J8KA 4W8QA 3GQAA 2NTQA 4XM3A 1FCFA 1LLWA 3BH7B 3GVJA 1PE9A 2BM6A 3SYJA 3H09A 5JMCB 4OJPA 2BM4A 4KH3A 4NK8A 3DU1X 2NT6A 3OIRA 3EQOA 4HYLA 3SY2A 4XKVA 1CLWA 1NHCA 3WWGA 1TILB 3D03A 5EUUA 4YDTA 1LM1A 3C0KA 2XT2A 3LJYA 3GHFA 4NK6A 4XLAA 1IA5A 2VFOA 4W8SA 2ZOAA 1PXZA 3K50A 3JX8A 1O8LA 3B90A 4OJLA 1O8EA 1O8GA 4DGHA 4XKWA 3D3UA 1BUZA 1FC6A 1QA2A 4YZXA 2X6YA 3GRHA 2VFQA 2VBMA 2OASA 3GVKA 2XC1A 5C1EA 1THNB 4MR0A 2UVFA 1HG8A 2VY9A 4XORA 3IH8A 2O17A 5EZBA 2QY1A 1IDKA 4XNFA 3T9GA 2QXZA 1TYWA 4XOTA 4C2LA 4DGFA 3OIZA 1N6FA 4U49A 3MOGA 3PSSA 4Z06A 2INUA 3JURA 2VBKA 1EE6A 1O8KA 2NTBA 1KCCA 1VBLA 2QZAA 5EUXA 1O88A 4QTPA 4OZYA 3UW0A 3GMFA 1QRBA 2B0RA 1O8IA 3GK7A 4OPWA 1OGMX 2IQ7A 1O8FA 1J7XA 4XN0A 1OOCA 3F43A 4OJOA 5EUWA 3NAWA 4XLHA 2AS0A 3VMVA 4XLFA 3VSVA 1TYXA 1QA1A 3ZPPA 4AVZA 4JRAC 4OZZA 2CWWA 1BN8A 3PETA 2ODLA 5JLVC 1GQ8A 4OJ5A 3FY3A 4XLEA 2O1DA 3ML3A 4HIZA 1OFLA 1LLZA 2EWEA 3LMWA 1DBGA 4W8TA 1O8MA 4PMHA 4YZAA 3NY7A 2X6XA 1VC1A 4XLCA 3N90A 1T6RA 4YZ0A 3RIQA 3GQ8A 4XQFA 3T6OA 3LYCA 1JTAA 2O0VA 3BH6B 3MGLA 1L1IA 1DBOA 4L1CA 2O04A 2DXLA 4OM9A 3VMWA 4XMYA 1BHEA 2VJIA 5C1CA 1H4ZA 4YZQA 4XL9A 3LLOA 1H80A 1JRGA 4XOPA 4YEIA 3AGEA 2X6WA 1QRCA 3V97A 4MXNA 4XONA 1TSPA 3ZSCA 1QQ1A 3AK5A 1QJVA 2INVA 1N6EA 2VJJA
chains in the Genus database with same CATH topology
1DABA 2V5IA 2VFMA 1QA3A 4OPWA 1TYUA 3ML3A 3JX8A 1CLWA 3P4GA 3RIQA 1HF2A 4V02C 3SZEA 2VFNA 2XC1A 3N6ZA 4OJLA 4OJOA 3LYCA 3BH7B 4OJ6A 1QA2A 1K8FA 1TYXA 1KQ5A 2BX6A 3BH6B 1QA1A 1QRCA 2BM6A 2W7ZA 2BM5A 2BM7A 3N90A 1K4ZA 2G0YA 2YUHA 3LJYA 3SYJA 3H09A 1TYWA 1TSPA 2VFQA 3TH0A 1QQ1A 4JRAC 2J8IA 3PETA 4OJPA 4OM9A 2BM4A 5JMCB 1WXRA 3AK5A 4KH3A 2VFPA 1TYVA 2IOUG 2VFOA 5JLVC 2F3LA 1QRBA 4OJ5A 2B0RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HF2 A;  1K8F A;  4V02 C;  1KQ5 A;  2BX6 A;  3BH6 B;  1K4Z A;  2YUH A;  3BH7 B;  2B0R A; 
#chains in the Genus database with same CATH topology
 1AUZ A;  4YEL A;  2VFN A;  4L8K A;  4DMG A;  1QA3 A;  3IF5 A;  2O6W A;  2Z8G A;  1CZF A;  3SUC A;  1OFM A;  3LDF A;  2B78 A;  2PYG A;  2VFM A;  2X3H A;  3GVL A;  2PEC A;  3P4G A;  3V8V A;  1HF2 A;  3N6Z A;  3B8Y A;  1OFD A;  1O8J A;  4URR A;  2NTP A;  2BM5 A;  1WMR A;  3EQN A;  2PYH A;  3GQ9 A;  3LKL A;  1O8H A;  2NSP A;  1EA0 A;  3VST A;  4YFO A;  4XN3 A;  2ZO9 B;  1TYU A;  1O8D A;  4AEJ A;  1QCX A;  4EW9 A;  3NB2 A;  1WXW A;  4I84 A;  1KQ5 A;  3QDQ A;  2YUH A;  2NST A;  2QYU A;  1WXR A;  1N6D A;  2F3L A;  2UVE A;  3PSZ A;  3IHA A;  1AIR A;  4V02 C;  1IB4 A;  2RRL A;  3KRG A;  3ZXN A;  1RU4 A;  1KCD A;  4XS5 A;  2BSP A;  2BX6 A;  2XTY A;  1K4Z A;  1WXX A;  1K32 A;  1TYV A;  4U4B A;  1DAB A;  1PLU A;  4GHN A;  1EZG A;  1KTW A;  3ZTB A;  5EUS A;  5EUZ A;  4YEJ A;  2VBE A;  1K5C A;  3GQ7 A;  1K8F A;  1IDJ A;  1H4Y A;  2W7Z A;  4Z05 A;  2NZM A;  4Z03 A;  3VSE A;  1RWR A;  4W8R A;  2XT4 A;  4YC5 A;  3SZE A;  3IH9 A;  1RMG A;  4OJ6 A;  2KA5 A;  3EH7 A;  1TH8 B;  3IHB A;  3JU4 A;  2BM7 A;  4XR6 A;  1XG2 A;  2G0Y A;  1SBO A;  2J8I A;  2XTX A;  2IOU G;  1X0C A;  1BPL A;  1FC9 A;  4YCQ A;  1V0E A;  3B4N A;  3VSU A;  1TID B;  3DUP A;  1H4X A;  2XTW A;  2DXN A;  3SQV A;  3DJA A;  1V0F A;  2KLN A;  5DNS A;  3AGD A;  3TH0 A;  1OFE A;  4JC0 A;  2VFP A;  1FC7 A;  2QX3 A;  2NT9 A;  2V5I A;  4HWV A;  4AE2 A;  1OGO X;  2X85 A;  2O0W A;  3DOR A;  5AMV A;  2J8K A;  4W8Q A;  3GQA A;  2NTQ A;  4XM3 A;  1FCF A;  1LLW A;  3BH7 B;  3GVJ A;  1PE9 A;  2BM6 A;  3SYJ A;  3H09 A;  5JMC B;  4OJP A;  2BM4 A;  4KH3 A;  4NK8 A;  3DU1 X;  2NT6 A;  3OIR A;  3EQO A;  4HYL A;  3SY2 A;  4XKV A;  1CLW A;  1NHC A;  3WWG A;  1TIL B;  3D03 A;  5EUU A;  4YDT A;  1LM1 A;  3C0K A;  2XT2 A;  3LJY A;  3GHF A;  4NK6 A;  4XLA A;  1IA5 A;  2VFO A;  4W8S A;  2ZOA A;  1PXZ A;  3K50 A;  3JX8 A;  1O8L A;  3B90 A;  4OJL A;  1O8E A;  1O8G A;  4DGH A;  4XKW A;  3D3U A;  1BUZ A;  1FC6 A;  1QA2 A;  4YZX A;  2X6Y A;  3GRH A;  2VFQ A;  2VBM A;  2OAS A;  3GVK A;  2XC1 A;  5C1E A;  1THN B;  4MR0 A;  2UVF A;  1HG8 A;  2VY9 A;  4XOR A;  3IH8 A;  2O17 A;  5EZB A;  2QY1 A;  1IDK A;  4XNF A;  3T9G A;  2QXZ A;  1TYW A;  4XOT A;  4C2L A;  4DGF A;  3OIZ A;  1N6F A;  4U49 A;  3MOG A;  3PSS A;  4Z06 A;  2INU A;  3JUR A;  2VBK A;  1EE6 A;  1O8K A;  2NTB A;  1KCC A;  1VBL A;  2QZA A;  5EUX A;  1O88 A;  4QTP A;  4OZY A;  3UW0 A;  3GMF A;  1QRB A;  2B0R A;  1O8I A;  3GK7 A;  4OPW A;  1OGM X;  2IQ7 A;  1O8F A;  1J7X A;  4XN0 A;  1OOC A;  3F43 A;  4OJO A;  5EUW A;  3NAW A;  4XLH A;  2AS0 A;  3VMV A;  4XLF A;  3VSV A;  1TYX A;  1QA1 A;  3ZPP A;  4AVZ A;  4JRA C;  4OZZ A;  2CWW A;  1BN8 A;  3PET A;  2ODL A;  5JLV C;  1GQ8 A;  4OJ5 A;  3FY3 A;  4XLE A;  2O1D A;  3ML3 A;  4HIZ A;  1OFL A;  1LLZ A;  2EWE A;  3LMW A;  1DBG A;  4W8T A;  1O8M A;  4PMH A;  4YZA A;  3NY7 A;  2X6X A;  1VC1 A;  4XLC A;  3N90 A;  1T6R A;  4YZ0 A;  3RIQ A;  3GQ8 A;  4XQF A;  3T6O A;  3LYC A;  1JTA A;  2O0V A;  3BH6 B;  3MGL A;  1L1I A;  1DBO A;  4L1C A;  2O04 A;  2DXL A;  4OM9 A;  3VMW A;  4XMY A;  1BHE A;  2VJI A;  5C1C A;  1H4Z A;  4YZQ A;  4XL9 A;  3LLO A;  1H80 A;  1JRG A;  4XOP A;  4YEI A;  3AGE A;  2X6W A;  1QRC A;  3V97 A;  4MXN A;  4XON A;  1TSP A;  3ZSC A;  1QQ1 A;  3AK5 A;  1QJV A;  2INV A;  1N6E A;  2VJJ A; 
#chains in the Genus database with same CATH homology
 1DAB A;  2V5I A;  2VFM A;  1QA3 A;  4OPW A;  1TYU A;  3ML3 A;  3JX8 A;  1CLW A;  3P4G A;  3RIQ A;  1HF2 A;  4V02 C;  3SZE A;  2VFN A;  2XC1 A;  3N6Z A;  4OJL A;  4OJO A;  3LYC A;  3BH7 B;  4OJ6 A;  1QA2 A;  1K8F A;  1TYX A;  1KQ5 A;  2BX6 A;  3BH6 B;  1QA1 A;  1QRC A;  2BM6 A;  2W7Z A;  2BM5 A;  2BM7 A;  3N90 A;  1K4Z A;  2G0Y A;  2YUH A;  3LJY A;  3SYJ A;  3H09 A;  1TYW A;  1TSP A;  2VFQ A;  3TH0 A;  1QQ1 A;  4JRA C;  2J8I A;  3PET A;  4OJP A;  4OM9 A;  2BM4 A;  5JMC B;  1WXR A;  3AK5 A;  4KH3 A;  2VFP A;  1TYV A;  2IOU G;  2VFO A;  5JLV C;  2F3L A;  1QRB A;  4OJ5 A;  2B0R A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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