1HF2A

Crystal structure of the bacterial cell-division inhibitor minc from t. maritima
Total Genus 57
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
57
sequence length
206
structure length
196
Chain Sequence
MVDFKMTKEGLVLLIKDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEVSQILVGKVQSRTTVESTGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEGGQAVVAALDLQTSLIQIAGFITHSKGEENVPSIAHVKGNRIVIEPFDKVSF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Crystal Structure of the Bacterial Cell-Division Inhibitor Minc
pubmed doi rcsb
source organism Thermotoga maritima
molecule tags Cell division protein
molecule keywords SEPTUM SITE-DETERMINING PROTEIN MINC
total genus 57
structure length 196
sequence length 206
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2000-11-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03775 MinC_C Septum formation inhibitor MinC, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.70 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 1hf2A02
3.30.750.50 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA Cell-division inhibitor MinC, N-terminal domain 1hf2A01
2B0RA 3BH7B 1K4ZA 2BX6A 1HF2A 2YUHA 4V02C 3BH6B 1K8FA 1KQ5A
chains in the Genus database with same CATH superfamily
1OFLA 4YZ0A 3OIRA 3RIQA 4OJ5A 2J8KA 4OM9A 3DORA 4GHNA 3PSZA 1QJVA 4AVZA 1QA1A 1BPLA 2XTYA 5EUUA 1FC6A 3SZEA 2BM4A 1RU4A 3IH8A 2J8IA 4YZQA 4OZZA 4DMGA 1EA0A 2QY1A 2VFNA 1KTWA 4XN0A 4YZAA 1H4YA 2OASA 3JX8A 1OFDA 2XT4A 4URRA 3ZXNA 1TIDB 1LLWA 3GVKA 4W8RA 1OGOX 5DNSA 4XLHA 4XR6A 1HG8A 1QQ1A 3WWGA 4JRAC 4W8QA 2VY9A 4OJ6A 3PETA 4OJOA 1BUZA 4AEJA 2NSPA 4DGFA 2NT9A 2DXNA 4PMHA 2X6YA 3LYCA 5JMCB 3BH7B 1WXWA 1PXZA 2G0YA 1BN8A 2NT6A 4XQFA 5C1CA 1H4ZA 1DBOA 1OFEA 3GQ8A 1O8KA 1K4ZA 3LJYA 3SUCA 3EQNA 1PE9A 3TH0A 2NTQA 3LKLA 2BM5A 1HF2A 3VMWA 2AS0A 3NB2A 5EUXA 2F3LA 2UVEA 3MGLA 1DABA 3VMVA 3GHFA 2O0VA 4DGHA 1O88A 3D03A 3EH7A 2Z8GA 3D3UA 2X3HA 2NTBA 3N90A 4YDTA 2QYUA 1WXXA 2VFPA 4XLCA 3GVJA 4XS5A 2QX3A 3B90A 4XLEA 3GQ9A 3VSVA 2UVFA 3SQVA 1K8FA 4NK8A 1SBOA 3FY3A 1GQ8A 2INUA 4U49A 1V0FA 4XL9A 4W8SA 3VSTA 2QZAA 2PYHA 3UW0A 2QXZA 1O8HA 1TILB 2IOUG 3SY2A 4C2LA 1FC9A 5EUZA 1VC1A 4V02C 1LLZA 1QA3A 1RMGA 1TH8B 3OIZA 3IHBA 2V5IA 2DXLA 4EW9A 4XOTA 3AK5A 4W8TA 1OGMX 1L1IA 4XN3A 3IHAA 2IQ7A 1AUZA 4L1CA 3VSEA 3PSSA 1JRGA 2PECA 3B4NA 3QDQA 4Z03A 1IB4A 2VJIA 4YELA 3P4GA 5C1EA 3GQAA 2YUHA 1IA5A 1JTAA 1OOCA 1XG2A 1WMRA 3IH9A 1THNB 5EZBA 2O17A 2ODLA 1O8DA 5EUSA 1X0CA 3MOGA 1O8LA 1DBGA 1J7XA 1RWRA 2EWEA 4XLAA 1H80A 2PYGA 4HWVA 1KQ5A 2X6WA 4NK6A 1PLUA 1KCDA 3K50A 4OJPA 4YCQA 1LM1A 4MXNA 3H09A 2VFQA 2VFOA 1TYXA 3ZTBA 3LLOA 3BH6B 1IDJA 1H4XA 1TYUA 3F43A 1AIRA 1QRCA 3IF5A 4HYLA 3AGEA 4OJLA 2NTPA 2VJJA 2ZO9B 2XTWA 4YFOA 2W7ZA 3ML3A 4XNFA 1WXRA 2XC1A 2NSTA 1O8IA 4L8KA 4XLFA 1K32A 1BHEA 2XTXA 2X85A 3NY7A 4AE2A 4Z05A 2BM6A 1EE6A 4XMYA 3T9GA 4QTPA 3DU1X 4YEIA 2BX6A 1QA2A 3NAWA 3T6OA 2KA5A 2O04A 1OFMA 4JC0A 4MR0A 3ZSCA 3AGDA 2RRLA 3VSUA 3GMFA 4XM3A 2O0WA 2VBEA 1K5CA 1TSPA 2O6WA 4YZXA 4XKVA 1QCXA 5AMVA 1O8EA 1QRBA 4YEJA 4KH3A 2KLNA 2BSPA 4OPWA 2B0RA 4XOPA 2O1DA 1N6DA 3DJAA 2VBMA 1O8GA 2B78A 4HIZA 4XONA 3JURA 3GVLA 1FC7A 1CZFA 3JU4A 1O8FA 5EUWA 1N6EA 1O8JA 3EQOA 1N6FA 1KCCA 3N6ZA 3V8VA 2XT2A 3DUPA 4I84A 3LDFA 2X6XA 4U4BA 2BM7A 2CWWA 4XKWA 3C0KA 3V97A 2VBKA 1IDKA 2INVA 4XORA 1NHCA 3SYJA 1O8MA 3KRGA 4Z06A 1TYWA 3B8YA 4OZYA 1VBLA 1CLWA 2VFMA 3GRHA 3ZPPA 3LMWA 1V0EA 2ZOAA 1EZGA 4YC5A 2NZMA 5JLVC 3GQ7A 1T6RA 1FCFA 3GK7A 1TYVA
chains in the Genus database with same CATH topology
1TSPA 3P4GA 4OJLA 2BM5A 2BX6A 2J8IA 1HF2A 3RIQA 2VFOA 2YUHA 2VFPA 2V5IA 2F3LA 4OJ5A 1TYWA 1KQ5A 1QA2A 3LYCA 1TYXA 1QRBA 2W7ZA 3BH7B 3ML3A 1CLWA 4OM9A 2VFMA 5JMCB 2BM7A 2G0YA 2XC1A 1DABA 1WXRA 3AK5A 1QQ1A 3BH6B 1K8FA 4JRAC 2VFNA 1QA1A 5JLVC 4OJ6A 4KH3A 1TYVA 1TYUA 3PETA 4OJPA 2IOUG 2B0RA 1QRCA 4OPWA 4OJOA 1K4ZA 3N6ZA 3SZEA 3JX8A 2BM6A 2BM4A 3LJYA 3H09A 3N90A 2VFQA 4V02C 1QA3A 3SYJA 3TH0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2B0R A;  3BH7 B;  1K4Z A;  2BX6 A;  1HF2 A;  2YUH A;  4V02 C;  3BH6 B;  1K8F A;  1KQ5 A; 
#chains in the Genus database with same CATH topology
 1OFL A;  4YZ0 A;  3OIR A;  3RIQ A;  4OJ5 A;  2J8K A;  4OM9 A;  3DOR A;  4GHN A;  3PSZ A;  1QJV A;  4AVZ A;  1QA1 A;  1BPL A;  2XTY A;  5EUU A;  1FC6 A;  3SZE A;  2BM4 A;  1RU4 A;  3IH8 A;  2J8I A;  4YZQ A;  4OZZ A;  4DMG A;  1EA0 A;  2QY1 A;  2VFN A;  1KTW A;  4XN0 A;  4YZA A;  1H4Y A;  2OAS A;  3JX8 A;  1OFD A;  2XT4 A;  4URR A;  3ZXN A;  1TID B;  1LLW A;  3GVK A;  4W8R A;  1OGO X;  5DNS A;  4XLH A;  4XR6 A;  1HG8 A;  1QQ1 A;  3WWG A;  4JRA C;  4W8Q A;  2VY9 A;  4OJ6 A;  3PET A;  4OJO A;  1BUZ A;  4AEJ A;  2NSP A;  4DGF A;  2NT9 A;  2DXN A;  4PMH A;  2X6Y A;  3LYC A;  5JMC B;  3BH7 B;  1WXW A;  1PXZ A;  2G0Y A;  1BN8 A;  2NT6 A;  4XQF A;  5C1C A;  1H4Z A;  1DBO A;  1OFE A;  3GQ8 A;  1O8K A;  1K4Z A;  3LJY A;  3SUC A;  3EQN A;  1PE9 A;  3TH0 A;  2NTQ A;  3LKL A;  2BM5 A;  1HF2 A;  3VMW A;  2AS0 A;  3NB2 A;  5EUX A;  2F3L A;  2UVE A;  3MGL A;  1DAB A;  3VMV A;  3GHF A;  2O0V A;  4DGH A;  1O88 A;  3D03 A;  3EH7 A;  2Z8G A;  3D3U A;  2X3H A;  2NTB A;  3N90 A;  4YDT A;  2QYU A;  1WXX A;  2VFP A;  4XLC A;  3GVJ A;  4XS5 A;  2QX3 A;  3B90 A;  4XLE A;  3GQ9 A;  3VSV A;  2UVF A;  3SQV A;  1K8F A;  4NK8 A;  1SBO A;  3FY3 A;  1GQ8 A;  2INU A;  4U49 A;  1V0F A;  4XL9 A;  4W8S A;  3VST A;  2QZA A;  2PYH A;  3UW0 A;  2QXZ A;  1O8H A;  1TIL B;  2IOU G;  3SY2 A;  4C2L A;  1FC9 A;  5EUZ A;  1VC1 A;  4V02 C;  1LLZ A;  1QA3 A;  1RMG A;  1TH8 B;  3OIZ A;  3IHB A;  2V5I A;  2DXL A;  4EW9 A;  4XOT A;  3AK5 A;  4W8T A;  1OGM X;  1L1I A;  4XN3 A;  3IHA A;  2IQ7 A;  1AUZ A;  4L1C A;  3VSE A;  3PSS A;  1JRG A;  2PEC A;  3B4N A;  3QDQ A;  4Z03 A;  1IB4 A;  2VJI A;  4YEL A;  3P4G A;  5C1E A;  3GQA A;  2YUH A;  1IA5 A;  1JTA A;  1OOC A;  1XG2 A;  1WMR A;  3IH9 A;  1THN B;  5EZB A;  2O17 A;  2ODL A;  1O8D A;  5EUS A;  1X0C A;  3MOG A;  1O8L A;  1DBG A;  1J7X A;  1RWR A;  2EWE A;  4XLA A;  1H80 A;  2PYG A;  4HWV A;  1KQ5 A;  2X6W A;  4NK6 A;  1PLU A;  1KCD A;  3K50 A;  4OJP A;  4YCQ A;  1LM1 A;  4MXN A;  3H09 A;  2VFQ A;  2VFO A;  1TYX A;  3ZTB A;  3LLO A;  3BH6 B;  1IDJ A;  1H4X A;  1TYU A;  3F43 A;  1AIR A;  1QRC A;  3IF5 A;  4HYL A;  3AGE A;  4OJL A;  2NTP A;  2VJJ A;  2ZO9 B;  2XTW A;  4YFO A;  2W7Z A;  3ML3 A;  4XNF A;  1WXR A;  2XC1 A;  2NST A;  1O8I A;  4L8K A;  4XLF A;  1K32 A;  1BHE A;  2XTX A;  2X85 A;  3NY7 A;  4AE2 A;  4Z05 A;  2BM6 A;  1EE6 A;  4XMY A;  3T9G A;  4QTP A;  3DU1 X;  4YEI A;  2BX6 A;  1QA2 A;  3NAW A;  3T6O A;  2KA5 A;  2O04 A;  1OFM A;  4JC0 A;  4MR0 A;  3ZSC A;  3AGD A;  2RRL A;  3VSU A;  3GMF A;  4XM3 A;  2O0W A;  2VBE A;  1K5C A;  1TSP A;  2O6W A;  4YZX A;  4XKV A;  1QCX A;  5AMV A;  1O8E A;  1QRB A;  4YEJ A;  4KH3 A;  2KLN A;  2BSP A;  4OPW A;  2B0R A;  4XOP A;  2O1D A;  1N6D A;  3DJA A;  2VBM A;  1O8G A;  2B78 A;  4HIZ A;  4XON A;  3JUR A;  3GVL A;  1FC7 A;  1CZF A;  3JU4 A;  1O8F A;  5EUW A;  1N6E A;  1O8J A;  3EQO A;  1N6F A;  1KCC A;  3N6Z A;  3V8V A;  2XT2 A;  3DUP A;  4I84 A;  3LDF A;  2X6X A;  4U4B A;  2BM7 A;  2CWW A;  4XKW A;  3C0K A;  3V97 A;  2VBK A;  1IDK A;  2INV A;  4XOR A;  1NHC A;  3SYJ A;  1O8M A;  3KRG A;  4Z06 A;  1TYW A;  3B8Y A;  4OZY A;  1VBL A;  1CLW A;  2VFM A;  3GRH A;  3ZPP A;  3LMW A;  1V0E A;  2ZOA A;  1EZG A;  4YC5 A;  2NZM A;  5JLV C;  3GQ7 A;  1T6R A;  1FCF A;  3GK7 A;  1TYV A; 
#chains in the Genus database with same CATH homology
 1TSP A;  3P4G A;  4OJL A;  2BM5 A;  2BX6 A;  2J8I A;  1HF2 A;  3RIQ A;  2VFO A;  2YUH A;  2VFP A;  2V5I A;  2F3L A;  4OJ5 A;  1TYW A;  1KQ5 A;  1QA2 A;  3LYC A;  1TYX A;  1QRB A;  2W7Z A;  3BH7 B;  3ML3 A;  1CLW A;  4OM9 A;  2VFM A;  5JMC B;  2BM7 A;  2G0Y A;  2XC1 A;  1DAB A;  1WXR A;  3AK5 A;  1QQ1 A;  3BH6 B;  1K8F A;  4JRA C;  2VFN A;  1QA1 A;  5JLV C;  4OJ6 A;  4KH3 A;  1TYV A;  1TYU A;  3PET A;  4OJP A;  2IOU G;  2B0R A;  1QRC A;  4OPW A;  4OJO A;  1K4Z A;  3N6Z A;  3SZE A;  3JX8 A;  2BM6 A;  2BM4 A;  3LJY A;  3H09 A;  3N90 A;  2VFQ A;  4V02 C;  1QA3 A;  3SYJ A;  3TH0 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...