1HK1A

Human serum albumin complexed with thyroxine (3,3',5,5'-tetraiodo-l-thyronine)
Total Genus 210
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
210
sequence length
565
structure length
553
Chain Sequence
SEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTDCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Plasma protein
molecule keywords SERUM ALBUMIN
publication title Structural Basis of Albumin-Thyroxine Interactions and Familial Dysalbuminemic Hyperthyroxinemia
pubmed doi rcsb
source organism Homo sapiens
total genus 210
structure length 553
sequence length 565
ec nomenclature
pdb deposition date 2003-03-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1hk1A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1hk1A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1hk1A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1hk1A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1hk1A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1hk1A05
1UORA 4Z69A 5FUOA 2XVQA 2I30A 1HK5A 2BXPA 4L8UA 1HK2A 1N5UA 2XVVA 2BXMA 4JK4A 4OT2A 4LB9A 4F5TA 4HGKA 2BXIA 3LU8A 2XVUA 1BKEA 4F5SA 2BXGA 2BXKA 4K71A 1KW2A 2BXBA 1E7CA 1LOTA 4N0UD 1MA9A 3B9LA 1AO6A 2XW0A 3LU7A 4L9KA 1E7GA 1HK1A 3JRYA 4HGMB 2I2ZA 4OR0A 2BXCA 1E7IA 2YDFA 2BXEA 1E7BA 4LA0A 3CX9A 1TF0A 1H9ZA 2BXHA 4PO0A 4EMXA 2BXLA 1BM0A 2VUEA 3UIVA 1J7EA 1J78A 5HOZA 1E7AA 4IW2A 1HA2A 3V09A 2XSIA 5ID7A 1HK4A 4E99A 2VUFA 3TDLA 4LUHA 5IFOA 5ID9A 5IJEA 5GHKA 1KXPD 4ZBQA 5IIHA 3LU6A 4G03A 2BXDA 1HK3A 4F5UA 4LB2A 2VDBA 2XW1A 5IIXA 1E7EA 3V03A 3SQJA 3B9MA 4BKEA 2BXOA 2BXAA 1E78A 2BXFA 4J2VA 3JQZA 4N0FD 4S1YA 1E7HA 4LUFA 5DQFA 1E7FA 2BXNA 1GNJA 1GNIA 5IJFA 5IIUA 2BX8A 4IW1A 3A73A 5IJ5A 3V08A 4L9QA 5DBYA 4G04A 4ZBRA 2XVWA 4F5VA 4K2CA 1BJ5A 1O9XA 2BXQA
chains in the Genus database with same CATH superfamily
1UORA 4GDLB 3NVMA 5GINA 4C31B 4D7XA 2QHBA 4Z69A 4MBEC 5FUOA 2XVQA 3KIKA 2I30A 2EFCA 1HK5A 2BXPA 2EFHA 3H37A 1HK2A 1N5UA 4FJCB 2DBWA 4L8UA 2Z8JA 2LQIA 2XVVA 3NMUA 2BXMA 2E0XA 4JK4A 5BPKA 2XMOA 3GA9L 4OT2A 4LB9A 4FIPB 4F5TA 4HGKA 2BXIA 3LU8A 2LXTA 1MUHA 2XVUA 1BKEA 2LQHA 4F5SA 2BXGA 3NVKA 1KDXA 2BXKA 4K71A 1KW2A 2BXBA 1E7CA 4NAWB 1LOTA 3NVIA 4N0UD 1MA9A 2K0NA 1MIYA 3B9LA 1AO6A 2CKXA 2XW0A 1TXUA 3LU7A 4L9KA 2AGHB 2QM6A 1E7GA 1HK1A 3JRYA 1IJGA 4HGMB 2I2ZA 2OT3A 3GQXA 2NNWA 2BXCA 1E7IA 4OR0A 3ECPA 2KWFA 2YDFA 2BXEA 1E7BA 4W4UB 3WHQA 1MIWA 3ICXA 5B5TA 2AJEA 4LA0A 3CX9A 1TF0A 1H9ZA 3GQUA 2BXHA 3FNMA 2DBXA 2EFEA 4PO0A 2LOQA 4EMXA 2BXLA 2JUHA 2LXSA 4G01A 1BM0A 4OTUA 3SIUB 2VUEA 4DM0A 4M70B 4N3ZA 3UIVA 1J7EA 1J78A 3WHSA 5HOZA 1E7AA 3PLAA 1VFIA 4GG2A 3MHSB 4IW2A 1HA2A 3V09A 1VZSA 2XSIA 1FOUA 4BY9C 5ID7A 1HK4A 4E99A 2VUFA 4DHXB 3TDLA 4LUHA 3WHRA 5IFOA 5ID9A 4ZUXV 3W1SA 5IJEA 2Z8IA 4ZBKA 5GHKA 1KXPD 3VQIA 4ZBQA 5IIHA 3KJLA 3LU6A 4FK5B 4G03A 2BXDA 3G9KD 1HK3A 1MIVA 3MHHB 4F5UA 5GIOA 2Z8KA 4ZC6A 2NQOA 1H5WA 4LB2A 2QMCA 2VDBA 2XW1A 4TQ1A 1NT2B 5IIXA 4I9OA 1E7EA 4WA6B 3V03A 4GDXA 2EFDA 3SQJA 1SB0A 3B9MA 2BXOA 2BXAA 4BKEA 5GIPA 1E78A 1MM8A 2BXFA 2DYOA 3JQZA 4J2VA 3SIVB 4N0FD 2DG5A 4S1YA 1E7HA 4LUFA 2GUTA 2ROHA 3A75A 1JNBA 5DQFA 1E7FA 2BXNA 1GNJA 1GNIA 5IJFA 4GDKB 4Z9OA 4TQ0A 1MUSA 3M99C 5IIUA 2BX8A 3FWBC 3H3AA 2E0YA 2V36A 2OZBB 4IW1A 3A73A 2KBZA 5IJ5A 3V08A 4L9QA 5DBYA 4OTTA 5D7GA 2DYMA 4ZCGA 4G04A 4ZBRA 2XVWA 2DBUA 3BPJA 4K2CA 4F5VA 1BJ5A 1O9XA 2BXQA 1LNSA 3FWCC
chains in the Genus database with same CATH topology
1UORA 4GDLB 3NVMA 5GINA 4C31B 2QHBA 4Z69A 4MBEC 5FUOA 2XVQA 3KIKA 2I30A 2EFCA 1HK5A 2BXPA 2EFHA 3H37A 1HK2A 1N5UA 4FJCB 2DBWA 4L8UA 2Z8JA 2XVVA 3NMUA 2BXMA 2E0XA 4JK4A 5BPKA 2XMOA 3GA9L 4OT2A 4LB9A 4FIPB 4F5TA 4HGKA 2BXIA 3LU8A 2XVUA 1BKEA 4F5SA 3NVKA 2BXGA 2BXKA 4K71A 1KW2A 2BXBA 1E7CA 4NAWB 1LOTA 3NVIA 4N0UD 1MA9A 1MIYA 3B9LA 1AO6A 2CKXA 2XW0A 1TXUA 3LU7A 4L9KA 2QM6A 1E7GA 1HK1A 3JRYA 1IJGA 4HGMB 2I2ZA 2OT3A 3GQXA 2NNWA 2BXCA 1E7IA 4OR0A 2YDFA 2BXEA 1E7BA 4W4UB 3WHQA 1MIWA 3ICXA 5B5TA 2AJEA 4LA0A 3CX9A 1TF0A 1H9ZA 3GQUA 2BXHA 3FNMA 2DBXA 2EFEA 4PO0A 2LOQA 4EMXA 2BXLA 2JUHA 4G01A 1BM0A 4OTUA 3SIUB 2VUEA 4M70B 4N3ZA 3UIVA 1J7EA 1J78A 3WHSA 5HOZA 1E7AA 3PLAA 1VFIA 4GG2A 3MHSB 4IW2A 1HA2A 3V09A 1VZSA 2XSIA 1FOUA 4BY9C 5ID7A 1HK4A 4E99A 2VUFA 4DHXB 3TDLA 4LUHA 3WHRA 5IFOA 5ID9A 4ZUXV 3W1SA 5IJEA 2Z8IA 4ZBKA 5GHKA 1KXPD 3VQIA 4ZBQA 5IIHA 3KJLA 3LU6A 4FK5B 4G03A 2BXDA 3G9KD 1HK3A 1MIVA 3MHHB 4F5UA 5GIOA 2Z8KA 4ZC6A 2NQOA 1H5WA 4LB2A 2QMCA 2VDBA 2XW1A 4TQ1A 1NT2B 5IIXA 1E7EA 4WA6B 3V03A 4GDXA 2EFDA 3SQJA 3B9MA 4BKEA 2BXOA 2BXAA 5GIPA 1E78A 2BXFA 2DYOA 3JQZA 4J2VA 3SIVB 4N0FD 2DG5A 4S1YA 1E7HA 4LUFA 2ROHA 3A75A 1JNBA 5DQFA 1E7FA 2BXNA 1GNJA 1GNIA 5IJFA 4GDKB 4Z9OA 4TQ0A 3M99C 5IIUA 2BX8A 3FWBC 3H3AA 2E0YA 2V36A 2OZBB 4IW1A 3A73A 2KBZA 5IJ5A 3V08A 4L9QA 5DBYA 4OTTA 5D7GA 2DYMA 4ZCGA 4G04A 4ZBRA 2XVWA 2DBUA 4F5VA 4K2CA 1BJ5A 1O9XA 2BXQA 1LNSA 3FWCC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UOR A;  4Z69 A;  5FUO A;  2XVQ A;  2I30 A;  1HK5 A;  2BXP A;  4L8U A;  1HK2 A;  1N5U A;  2XVV A;  2BXM A;  4JK4 A;  4OT2 A;  4LB9 A;  4F5T A;  4HGK A;  2BXI A;  3LU8 A;  2XVU A;  1BKE A;  4F5S A;  2BXG A;  2BXK A;  4K71 A;  1KW2 A;  2BXB A;  1E7C A;  1LOT A;  4N0U D;  1MA9 A;  3B9L A;  1AO6 A;  2XW0 A;  3LU7 A;  4L9K A;  1E7G A;  1HK1 A;  3JRY A;  4HGM B;  2I2Z A;  4OR0 A;  2BXC A;  1E7I A;  2YDF A;  2BXE A;  1E7B A;  4LA0 A;  3CX9 A;  1TF0 A;  1H9Z A;  2BXH A;  4PO0 A;  4EMX A;  2BXL A;  1BM0 A;  2VUE A;  3UIV A;  1J7E A;  1J78 A;  5HOZ A;  1E7A A;  4IW2 A;  1HA2 A;  3V09 A;  2XSI A;  5ID7 A;  1HK4 A;  4E99 A;  2VUF A;  3TDL A;  4LUH A;  5IFO A;  5ID9 A;  5IJE A;  5GHK A;  1KXP D;  4ZBQ A;  5IIH A;  3LU6 A;  4G03 A;  2BXD A;  1HK3 A;  4F5U A;  4LB2 A;  2VDB A;  2XW1 A;  5IIX A;  1E7E A;  3V03 A;  3SQJ A;  3B9M A;  4BKE A;  2BXO A;  2BXA A;  1E78 A;  2BXF A;  4J2V A;  3JQZ A;  4N0F D;  4S1Y A;  1E7H A;  4LUF A;  5DQF A;  1E7F A;  2BXN A;  1GNJ A;  1GNI A;  5IJF A;  5IIU A;  2BX8 A;  4IW1 A;  3A73 A;  5IJ5 A;  3V08 A;  4L9Q A;  5DBY A;  4G04 A;  4ZBR A;  2XVW A;  4F5V A;  4K2C A;  1BJ5 A;  1O9X A;  2BXQ A; 
#chains in the Genus database with same CATH topology
 1UOR A;  4GDL B;  3NVM A;  5GIN A;  4C31 B;  4D7X A;  2QHB A;  4Z69 A;  4MBE C;  5FUO A;  2XVQ A;  3KIK A;  2I30 A;  2EFC A;  1HK5 A;  2BXP A;  2EFH A;  3H37 A;  1HK2 A;  1N5U A;  4FJC B;  2DBW A;  4L8U A;  2Z8J A;  2LQI A;  2XVV A;  3NMU A;  2BXM A;  2E0X A;  4JK4 A;  5BPK A;  2XMO A;  3GA9 L;  4OT2 A;  4LB9 A;  4FIP B;  4F5T A;  4HGK A;  2BXI A;  3LU8 A;  2LXT A;  1MUH A;  2XVU A;  1BKE A;  2LQH A;  4F5S A;  2BXG A;  3NVK A;  1KDX A;  2BXK A;  4K71 A;  1KW2 A;  2BXB A;  1E7C A;  4NAW B;  1LOT A;  3NVI A;  4N0U D;  1MA9 A;  2K0N A;  1MIY A;  3B9L A;  1AO6 A;  2CKX A;  2XW0 A;  1TXU A;  3LU7 A;  4L9K A;  2AGH B;  2QM6 A;  1E7G A;  1HK1 A;  3JRY A;  1IJG A;  4HGM B;  2I2Z A;  2OT3 A;  3GQX A;  2NNW A;  2BXC A;  1E7I A;  4OR0 A;  3ECP A;  2KWF A;  2YDF A;  2BXE A;  1E7B A;  4W4U B;  3WHQ A;  1MIW A;  3ICX A;  5B5T A;  2AJE A;  4LA0 A;  3CX9 A;  1TF0 A;  1H9Z A;  3GQU A;  2BXH A;  3FNM A;  2DBX A;  2EFE A;  4PO0 A;  2LOQ A;  4EMX A;  2BXL A;  2JUH A;  2LXS A;  4G01 A;  1BM0 A;  4OTU A;  3SIU B;  2VUE A;  4DM0 A;  4M70 B;  4N3Z A;  3UIV A;  1J7E A;  1J78 A;  3WHS A;  5HOZ A;  1E7A A;  3PLA A;  1VFI A;  4GG2 A;  3MHS B;  4IW2 A;  1HA2 A;  3V09 A;  1VZS A;  2XSI A;  1FOU A;  4BY9 C;  5ID7 A;  1HK4 A;  4E99 A;  2VUF A;  4DHX B;  3TDL A;  4LUH A;  3WHR A;  5IFO A;  5ID9 A;  4ZUX V;  3W1S A;  5IJE A;  2Z8I A;  4ZBK A;  5GHK A;  1KXP D;  3VQI A;  4ZBQ A;  5IIH A;  3KJL A;  3LU6 A;  4FK5 B;  4G03 A;  2BXD A;  3G9K D;  1HK3 A;  1MIV A;  3MHH B;  4F5U A;  5GIO A;  2Z8K A;  4ZC6 A;  2NQO A;  1H5W A;  4LB2 A;  2QMC A;  2VDB A;  2XW1 A;  4TQ1 A;  1NT2 B;  5IIX A;  4I9O A;  1E7E A;  4WA6 B;  3V03 A;  4GDX A;  2EFD A;  3SQJ A;  1SB0 A;  3B9M A;  2BXO A;  2BXA A;  4BKE A;  5GIP A;  1E78 A;  1MM8 A;  2BXF A;  2DYO A;  3JQZ A;  4J2V A;  3SIV B;  4N0F D;  2DG5 A;  4S1Y A;  1E7H A;  4LUF A;  2GUT A;  2ROH A;  3A75 A;  1JNB A;  5DQF A;  1E7F A;  2BXN A;  1GNJ A;  1GNI A;  5IJF A;  4GDK B;  4Z9O A;  4TQ0 A;  1MUS A;  3M99 C;  5IIU A;  2BX8 A;  3FWB C;  3H3A A;  2E0Y A;  2V36 A;  2OZB B;  4IW1 A;  3A73 A;  2KBZ A;  5IJ5 A;  3V08 A;  4L9Q A;  5DBY A;  4OTT A;  5D7G A;  2DYM A;  4ZCG A;  4G04 A;  4ZBR A;  2XVW A;  2DBU A;  3BPJ A;  4K2C A;  4F5V A;  1BJ5 A;  1O9X A;  2BXQ A;  1LNS A;  3FWC C; 
#chains in the Genus database with same CATH homology
 1UOR A;  4GDL B;  3NVM A;  5GIN A;  4C31 B;  2QHB A;  4Z69 A;  4MBE C;  5FUO A;  2XVQ A;  3KIK A;  2I30 A;  2EFC A;  1HK5 A;  2BXP A;  2EFH A;  3H37 A;  1HK2 A;  1N5U A;  4FJC B;  2DBW A;  4L8U A;  2Z8J A;  2XVV A;  3NMU A;  2BXM A;  2E0X A;  4JK4 A;  5BPK A;  2XMO A;  3GA9 L;  4OT2 A;  4LB9 A;  4FIP B;  4F5T A;  4HGK A;  2BXI A;  3LU8 A;  2XVU A;  1BKE A;  4F5S A;  3NVK A;  2BXG A;  2BXK A;  4K71 A;  1KW2 A;  2BXB A;  1E7C A;  4NAW B;  1LOT A;  3NVI A;  4N0U D;  1MA9 A;  1MIY A;  3B9L A;  1AO6 A;  2CKX A;  2XW0 A;  1TXU A;  3LU7 A;  4L9K A;  2QM6 A;  1E7G A;  1HK1 A;  3JRY A;  1IJG A;  4HGM B;  2I2Z A;  2OT3 A;  3GQX A;  2NNW A;  2BXC A;  1E7I A;  4OR0 A;  2YDF A;  2BXE A;  1E7B A;  4W4U B;  3WHQ A;  1MIW A;  3ICX A;  5B5T A;  2AJE A;  4LA0 A;  3CX9 A;  1TF0 A;  1H9Z A;  3GQU A;  2BXH A;  3FNM A;  2DBX A;  2EFE A;  4PO0 A;  2LOQ A;  4EMX A;  2BXL A;  2JUH A;  4G01 A;  1BM0 A;  4OTU A;  3SIU B;  2VUE A;  4M70 B;  4N3Z A;  3UIV A;  1J7E A;  1J78 A;  3WHS A;  5HOZ A;  1E7A A;  3PLA A;  1VFI A;  4GG2 A;  3MHS B;  4IW2 A;  1HA2 A;  3V09 A;  1VZS A;  2XSI A;  1FOU A;  4BY9 C;  5ID7 A;  1HK4 A;  4E99 A;  2VUF A;  4DHX B;  3TDL A;  4LUH A;  3WHR A;  5IFO A;  5ID9 A;  4ZUX V;  3W1S A;  5IJE A;  2Z8I A;  4ZBK A;  5GHK A;  1KXP D;  3VQI A;  4ZBQ A;  5IIH A;  3KJL A;  3LU6 A;  4FK5 B;  4G03 A;  2BXD A;  3G9K D;  1HK3 A;  1MIV A;  3MHH B;  4F5U A;  5GIO A;  2Z8K A;  4ZC6 A;  2NQO A;  1H5W A;  4LB2 A;  2QMC A;  2VDB A;  2XW1 A;  4TQ1 A;  1NT2 B;  5IIX A;  1E7E A;  4WA6 B;  3V03 A;  4GDX A;  2EFD A;  3SQJ A;  3B9M A;  4BKE A;  2BXO A;  2BXA A;  5GIP A;  1E78 A;  2BXF A;  2DYO A;  3JQZ A;  4J2V A;  3SIV B;  4N0F D;  2DG5 A;  4S1Y A;  1E7H A;  4LUF A;  2ROH A;  3A75 A;  1JNB A;  5DQF A;  1E7F A;  2BXN A;  1GNJ A;  1GNI A;  5IJF A;  4GDK B;  4Z9O A;  4TQ0 A;  3M99 C;  5IIU A;  2BX8 A;  3FWB C;  3H3A A;  2E0Y A;  2V36 A;  2OZB B;  4IW1 A;  3A73 A;  2KBZ A;  5IJ5 A;  3V08 A;  4L9Q A;  5DBY A;  4OTT A;  5D7G A;  2DYM A;  4ZCG A;  4G04 A;  4ZBR A;  2XVW A;  2DBU A;  4F5V A;  4K2C A;  1BJ5 A;  1O9X A;  2BXQ A;  1LNS A;  3FWC C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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