1HXNA

1.8 angstroms crystal structure of the c-terminal domain of rabbit serum hemopexin
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
210
structure length
210
Chain Sequence
ESTRCDPDLVLSAMVSDNHGATYVFSGSHYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAFSWEDKLYLIQDTKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGRRLWWLDLKSGAQATWTELPWPHEKVDGALCMEKPLGPNSCSTSGPNLYLIHGPNLYCYRHVDKLNAAKNLPQPQRVSRLLGCTH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title 1.8 A crystal structure of the C-terminal domain of rabbit serum haemopexin.
pubmed doi rcsb
molecule tags Binding protein
molecule keywords HEMOPEXIN
total genus 41
structure length 210
sequence length 210
ec nomenclature
pdb deposition date 1995-06-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00045 Hemopexin Hemopexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.110.10.10 Mainly Beta 4 Propeller Hemopexin Hemopexin-like domain 1hxnA00
4FVLA 4FU4A 2JXYA 1GXDA 3C7XA 1GENA 4OEIA 4LL2A 1FBLA 1SU3A 4HSDA 1QJSA 4G0DA 1RTGA 2CLTA 3BA0A 2MQSA 1HXNA 1CK7A 3LP9A 3OYOA 4RT6B 1QHUA 4YEHA 4AUOA 3S18A 1PEXA 3V6NA 1ITVA
chains in the Genus database with same CATH superfamily
4FVLA 4FU4A 2JXYA 1GXDA 3C7XA 1GENA 4OEIA 4LL2A 1FBLA 1SU3A 4HSDA 1QJSA 4G0DA 1RTGA 2CLTA 3BA0A 2MQSA 1HXNA 1CK7A 3LP9A 3OYOA 4RT6B 1QHUA 4YEHA 4AUOA 3S18A 1PEXA 3V6NA 1ITVA
chains in the Genus database with same CATH topology
4FVLA 4FU4A 2JXYA 1GXDA 3C7XA 1GENA 4OEIA 4LL2A 1FBLA 1SU3A 4HSDA 1QJSA 4G0DA 1RTGA 2CLTA 3BA0A 2MQSA 1HXNA 1CK7A 3LP9A 3OYOA 4RT6B 1QHUA 4YEHA 4AUOA 3S18A 1PEXA 3V6NA 1ITVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FVL A;  4FU4 A;  2JXY A;  1GXD A;  3C7X A;  1GEN A;  4OEI A;  4LL2 A;  1FBL A;  1SU3 A;  4HSD A;  1QJS A;  4G0D A;  1RTG A;  2CLT A;  3BA0 A;  2MQS A;  1HXN A;  1CK7 A;  3LP9 A;  3OYO A;  4RT6 B;  1QHU A;  4YEH A;  4AUO A;  3S18 A;  1PEX A;  3V6N A;  1ITV A; 
#chains in the Genus database with same CATH topology
 4FVL A;  4FU4 A;  2JXY A;  1GXD A;  3C7X A;  1GEN A;  4OEI A;  4LL2 A;  1FBL A;  1SU3 A;  4HSD A;  1QJS A;  4G0D A;  1RTG A;  2CLT A;  3BA0 A;  2MQS A;  1HXN A;  1CK7 A;  3LP9 A;  3OYO A;  4RT6 B;  1QHU A;  4YEH A;  4AUO A;  3S18 A;  1PEX A;  3V6N A;  1ITV A; 
#chains in the Genus database with same CATH homology
 4FVL A;  4FU4 A;  2JXY A;  1GXD A;  3C7X A;  1GEN A;  4OEI A;  4LL2 A;  1FBL A;  1SU3 A;  4HSD A;  1QJS A;  4G0D A;  1RTG A;  2CLT A;  3BA0 A;  2MQS A;  1HXN A;  1CK7 A;  3LP9 A;  3OYO A;  4RT6 B;  1QHU A;  4YEH A;  4AUO A;  3S18 A;  1PEX A;  3V6N A;  1ITV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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