1I6HC

Rna polymerase ii elongation complex
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 5'-D(P*AP*AP*AP*TP*GP*CP*CP*TP*GP*GP*TP*CP*T)-3'
publication title Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Transcription/dna-rna hybrid
total genus 51
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2001-03-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1i6hC01
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1i6hC02
2NVTC 4GZYA 4C3HC 5IYDC 4A3BK 4G7HA 1ZYRA 1TWFK 4G7ZA 2WAQD 5IP9C 2A6HA 3HOUK 3H3VD 2PA8D 1R9TC 3HOYC 1K83K 4AYBL 4C3JC 3DXJA 5M5YK 2R7ZK 3S14C 2JA7C 4JK1A 2E2IK 3HOXK 3GTGC 3RZDK 4A93K 2NVYC 4BY1C 4C2MK 4MEYA 2Y0SL 2E2HK 3GTMK 4A3LK 4A3EK 1K83C 5M5XK 4OIRA 2YU9K 2PMZD 3S1MC 1IW7A 4A3JK 1I3QK 2WB1L 1WCMC 2NVTK 3S16K 4C3HK 5IYDK 3S15K 3GTKC 1I6VA 2E2IC 3HOXC 3S14K 4ZH4A 2WAQL 1SFOK 3S1NC 4A3MC 1YNNA 2PA8L 5IP9K 4MQ9A 4C3IC 4C2MC 2E2HC 3GTMC 5TMCA 5IYBC 2B63C 3HOWC 4A3LC 1R9TK 1YNJA 3HOZK 5D4DA 3PO3C 3S17C 1I3QC 2JA6K 3S16C 5M3FK 2NVXC 3S15C 3GTGK 4A3KC 3K7AC 2NVYK 4BY1K 1SFOC 3I4MK 2JA5C 4Y52C 1TWCC 3S1MK 4NOIA 1WCMK 4XSXA 5IYCC 3HOVC 3HOZC 4A3CC 3GTPK 1BDFA 2BE5A 2JA6C 3GTKK 4LLGA 2A6EA 4BY7K 3S1NK 4A3MK 4OIPA 2E2JK 4C3IK 3I4MC 4QIWL 5IYBK 2B63K 3HOWK 4YG2A 2A69A 4OINA 4QJVA 3S2HC 3S17K 2CW0A 4XSZA 3PO3K 4MEXA 3GTPC 2NVXK 5FLMK 4A3KK 3CQZC 3K7AK 1TWAC 4BY7C 5M3MK 3S1RC 2JA5K 3H3VL 2E2JC 2JA8C 5C4JC 4Y52K 2R93C 1TWCK 1I50C 4BXXC 4YFNA 1HQMA 5IYCK 5C3EK 3HOVK 4A3CK 4X6AK 1TWHC 3HKZD 3EQLA 4BBRC 4A3FC 5C44C 5FLMC 3M3YC 4A3DC 2PMZL 4XLNA 4OIOA 3S2DC 3S2HK 5C3EC 1I6HC 4X6AC 4KN7A 3CQZK 3I4NC 1TWAK 2O5JA 3S1RK 3PO2C 4QJVB 2JA8K 4KMUA 5C4JK 3S1QC 2R93K 3RZOC 4BBSC 4YFXA 1I50K 4BXXK 3GTOC 3H0GC 4LK1A 5C4XC 3HKZL 4OIQA 1TWHK 3M4OC 4A3FK 4BBRK 4A3IK 1Y1WK 5C44K 2VUMK 4Q4ZA 3M3YK 2A68A 4A3GC 2WB1D 5IP7C 4A3DK 3S2DK 2R92K 3FKIC 3GTJC 4G7OA 1I6HK 3GTQC 3GTLC 1Y1VK 2O5IA 2VUMC 4A3IC 1Y1WC 3I4NK 3PO2K 4A3JC 3S1QK 2JA7K 4LK0A 3RZOK 4Y7NK 4BBSK 4A3BC 3GTOK 3H0GK 4LJZA 1TWFC 2PPBA 4XLPA 2R92C 5C4XK 5FJ8K 2NVQK 3HOUC 3M4OK 1Y1VC 4KN4A 1SMYA 4AYBD 1TWGK 1XPPA 4A3GK 2R7ZC 5IP7K 5TMFA 4Y7NC 3RZDC 4A93C 3FKIK 3GTJK 4YFKA 2NVQC 3HOYK 3GTQK 5M5WK 2Y0SD 3GTLK 4A3EC 4QIWD 2YU9C 4C3JK 1TWGC 3WODA 4Q5SA
chains in the Genus database with same CATH superfamily
2NVTC 4KATA 1TWFA 1ZYRA 1DCHA 2WAQD 5IP9C 3H3VD 1R9TC 3TFJA 3DXJA 2R7ZA 3S14C 2JA7C 2GSUA 1GE9A 2E2IK 3HOXK 4M1XA 2E2HK 3GTMK 4BLAA 2YU9A 2PMZD 4XCHA 1JOEA 1O28A 3LAJA 2NVTK 3S16K 4KB2A 2GAHC 3S1NC 4A3MC 5IP9K 3TFHA 1C0AA 1R9TK 4A3LC 1O27A 1I3QC 2JA6K 2D6FC 3S15C 3TTGA 3K7AC 1B4AA 4AH6A 3I4MK 1B4BA 1XZQB 4KAWX 5HL7S 4XSXA 5IYCC 4WFAS 3HOZC 3GTKA 3N0BA 2BE5A 4BY7K 3S1NK 4A3MK 5CHPA 5DM6S 2B63A 3QX3A 3S2HC 2NVXA 3GTPC 2XCOA 3GEHA 3K7AK 1TWAC 1O26A 3S1RC 3AD9C 4P5BA 2XCQA 1TWCA 3DLLS 2R93C 4YFNA 1HQMA 1RU0A 5IYCK 1IS1A 1TWHC 3HKZD 3EQLA 4BBRC 3GSIA 3L4KA 3LAPA 4A3DC 4GTEA 4XLNA 3S2DC 3S2HK 4KDDA 3CQZA 1TWAK 3S1RK 2P5MA 1I50A 5JFEA 5E68A 2R93K 4YFXA 1BS2A 2VUMA 1TWHK 2RGRA 4BBRK 4GTFA 1PJ6A 1JVIA 4G0UA 4A3DK 2R92A 2L5NA 4J3NA 4KB4A 3S2DK 3GTJC 1Y1VA 2O5IA 2VUMC 1EH1A 2FQOA 3GTOA 2R92C 2ZUEA 1O25A 3HOUC 1Y1VC 4U67S 1UV7A 1KQ4A 2EBBA 4A93C 3GTJK 3HOYK 2NVQC 4KASA 2Y0SD 4C3JK 1TWGC 1YCLA 2PHCB 5IYDC 1ZVUA 2A6HA 3HOUK 1K83K 5TJ3A 3GTGC 4A93K 1DCOA 2E2HA 2NVYC 3GTMA 1IE0A 1WIHA 3NUHA 5M5XK 4OIRA 2WB1L 1WCMC 1FEUA 5IYDK 1I6VA 2E2IC 3HOXC 2WAQL 1SFOK 1R9TA 4C3IC 2E2HC 3GTMC 1WORA 5TMCA 5IYBC 2JA7A 5D4DA 3PO3C 3S17C 3S16C 3GTGK 4A3KC 5EGHA 2NVYK 2JA5C 1ZXOA 1ISEA 1WCMK 3VA7A 3HOVC 2JA6C 2GSNA 2E2JK 3OREA 2ZJPS 3SZYA 4C3IK 3I4MC 4QIWL 5IYBK 4YG2A 4IOAS 4QJVA 2P8TA 5CJ9A 2CW0A 1I3QA 3S17K 3PO3K 4MEXA 2KPUA 2FQTA 4A3KK 1VRQC 4BY7C 5M3MK 2JA5K 5C4JC 1F93A 3HOVK 4BKWA 4RMFA 4ILDA 3M3YC 1WQFA 1ZBSA 1USMA 1EI6A 1WOSA 2KWAA 3FHZA 4WJ3M 4OIOA 2CFAB 3GTPA 3AH5A 1TWAA 4KM8A 3I4NC 4KMUA 5C4JK 2R93A 3AQPA 1XZPA 4BBSC 1V5VA 3H0GC 1TWHA 3HKZL 4A3IK 1Y1WK 4WFNS 3M3YK 4A3GC 4C45A 4PABA 5IOTA 4G0WA 3GTQC 3GTLC 5HQHA 4GTCA 3I4NK 1IBAA 4IOCS 3OEPA 1XZQA 4LK0A 4BBSK 2RH6A 4A3BC 3FOEA 3H0GK 4LJZA 4P9SA 2PPBA 5FJ8K 3ADAC 1ZQ1C 4G0VA 1WOOA 3GEEA 4AYBD 1XPPA 4A3GK 1O2BA 3GTJA 3RZDC 3GTQK 5M5WK 3GTLK 4FZBA 3N0CA 3WODA 4Q5SA 3G4CA 2KXYA 4C3HC 4A3BK 4G7HA 1VH2A 5L46A 3HOYC 2PA8D 5DM7S 5JVOA 4C3JC 3HXAA 1JQWA 4JK1A 1O24A 1J6XA 3RZDK 4BY1C 4C2MK 2Y0SL 3A8KA 1K83C 1TWGA 3S1MC 1IW7A 1BJTA 4C3HK 1SFOA 4ZH4A 4MQ9A 4KARA 5M3FK 3GTGA 2NVYA 4BY1K 1SFOC 4LR2A 2ZUFA 1O2FB 4Y52C 3S1MK 1WCMA 4NOIA 1HI9A 4KMDA 4A3CC 1BDFA 2E2IA 2A6EA 1J98A 4OIPA 3GEIA 5JVHS 1YX2A 1EK8A 3LYWA 4OINA 4XSZA 3LPXA 1PJ7A 2XCRB 1L0WA 5FLMK 2JA5A 3H3VL 2E2JC 4Y52K 5C3EK 1XXAA 4A3CK 2JA6A 4X6AK 1IQ0A 1WQHA 3Q3QA 2PMZL 2Y3PA 2V6TA 3SZZA 3V4GA 3AD8C 4LOWA 3PO2C 4QJVB 1AB4A 1J6WA 3S1QC 1USOA 1WSRA 1WSVA 4KM9A 4LK1A 1G51A 1WOPA 3L4JA 4OIQA 2GAGC 3T01A 2WB1D 1VGXA 5IP7C 4LQYA 3FKIC 3CAGA 4WJ4A 4A3IC 1Y1WC 3PO2K 3S1QK 4Y7NK 3H0GA 2W7VA 1TWFC 2ZFZA 3JSTA 4KMHA 2ZJRS 4BLBA 1O29A 4KN4A 1SMYA 1XZPB 2GSOA 2R7ZC 5IOQA 5IP7K 1EFWA 5IOSA 5TMFA 3FKIK 2KQ1A 4YFKA 1J6VA 3T02A 3GTLA 3GTQA 4A3EC 4QIWD 2YU9C 3PIOS 1F7UA 4A3JC 2JA7K 3S14K 3AQOA 4GZYA 1DD5A 4O2DA 1TWFK 1VLOA 4G7ZA 4GT9A 2V6SA 4GTDA 4IO9S 4AYBL 5M5YK 2R7ZK 4WCES 4DDQA 2CFAA 4WFBS 4P5AA 4MEYA 4A3LK 1IL2A 4A3EK 2YU9K 4A3JK 1I3QK 3A8IA 1X31C 3S15K 3GTKC 1YNNA 2PA8L 4C2MC 2B63C 3HOWC 1YNJA 3HOZK 1XXBA 4KC6A 2NVXC 1VJEA 4GFQA 3A8JA 4KMAA 1K83A 1INNA 4GTAA 1TWCC 2L3UA 3GIRA 2JH3A 3BP3A 3OPFA 3ERED 3GTPK 3GTKK 4LLGA 3CF5S 3IPJA 2B63K 3HOWK 2A69A 2V6UA 1EQRA 2NVXK 3N3YA 3CQZC 1WQGA 2JA8C 3T00A 3TFIA 5HL8A 1TWCK 1I50C 4BXXC 1F7VA 5EGEA 4A3FC 1PJ5A 5C44C 5FLMC 5C3EC 1I6HC 2ZJQS 4X6AC 4KN7A 3CQZK 4GTLA 3S0XA 5JVGS 2O5JA 2JA8K 4GTBA 3RZOC 1I50K 4BXXK 3GTOC 3AD7C 3BUEA 5C4XC 5IORA 3M4OC 4A3FK 2VUMK 5C44K 4Q4ZA 4FM9A 2A68A 4WILA 1XXCA 3MMLB 3GDZA 2R92K 3BP8C 4G7OA 1I6HK 1Y1VK 3PIPS 3RZOK 3GTOK 5C4XK 4XLPA 2NVQK 3M4OK 3FOFA 4PAAA 1TWGK 1O2AA 1DCPA 3FKIA 4Y7NC 3G4AA 1Y1WA 1F9NA 1BGWA 4WF9S
chains in the Genus database with same CATH topology
2NVTC 4GZYA 4C3HC 5IYDC 4A3BK 4G7HA 1ZYRA 1TWFK 4G7ZA 2WAQD 5IP9C 2A6HA 3HOUK 3H3VD 2PA8D 1R9TC 3HOYC 1K83K 4AYBL 4C3JC 3DXJA 5M5YK 2R7ZK 3S14C 2JA7C 4JK1A 2E2IK 3HOXK 3GTGC 3RZDK 4A93K 2NVYC 4BY1C 4C2MK 4MEYA 2Y0SL 2E2HK 3GTMK 4A3LK 4A3EK 1K83C 5M5XK 4OIRA 2YU9K 2PMZD 3S1MC 1IW7A 4A3JK 1I3QK 2WB1L 1WCMC 2NVTK 3S16K 4C3HK 5IYDK 3S15K 3GTKC 1I6VA 2E2IC 3HOXC 3S14K 4ZH4A 2WAQL 1SFOK 3S1NC 4A3MC 1YNNA 2PA8L 5IP9K 4MQ9A 4C3IC 4C2MC 2E2HC 3GTMC 5TMCA 5IYBC 2B63C 3HOWC 4A3LC 1R9TK 1YNJA 3HOZK 5D4DA 3PO3C 3S17C 1I3QC 2JA6K 3S16C 5M3FK 2NVXC 3S15C 3GTGK 4A3KC 3K7AC 2NVYK 4BY1K 1SFOC 3I4MK 2JA5C 4Y52C 1TWCC 3S1MK 4NOIA 1WCMK 4XSXA 5IYCC 3HOVC 3HOZC 4A3CC 3GTPK 1BDFA 2BE5A 2JA6C 3GTKK 4LLGA 2A6EA 4BY7K 3S1NK 4A3MK 4OIPA 2E2JK 4C3IK 3I4MC 4QIWL 5IYBK 2B63K 3HOWK 4YG2A 2A69A 4OINA 4QJVA 3S2HC 3S17K 2CW0A 4XSZA 3PO3K 4MEXA 3GTPC 2NVXK 5FLMK 4A3KK 3CQZC 3K7AK 1TWAC 4BY7C 5M3MK 3S1RC 2JA5K 3H3VL 2E2JC 2JA8C 5C4JC 4Y52K 2R93C 1TWCK 1I50C 4BXXC 4YFNA 1HQMA 5IYCK 5C3EK 3HOVK 4A3CK 4X6AK 1TWHC 3HKZD 3EQLA 4BBRC 4A3FC 5C44C 5FLMC 3M3YC 4A3DC 2PMZL 4XLNA 4OIOA 3S2DC 3S2HK 5C3EC 1I6HC 4X6AC 4KN7A 3CQZK 3I4NC 1TWAK 2O5JA 3S1RK 3PO2C 4QJVB 2JA8K 4KMUA 5C4JK 3S1QC 2R93K 3RZOC 4BBSC 4YFXA 1I50K 4BXXK 3GTOC 3H0GC 4LK1A 5C4XC 3HKZL 4OIQA 1TWHK 3M4OC 4A3FK 4BBRK 4A3IK 1Y1WK 5C44K 2VUMK 4Q4ZA 3M3YK 2A68A 4A3GC 2WB1D 5IP7C 4A3DK 3S2DK 2R92K 3FKIC 3GTJC 4G7OA 1I6HK 3GTQC 3GTLC 1Y1VK 2O5IA 2VUMC 4A3IC 1Y1WC 3I4NK 3PO2K 4A3JC 3S1QK 2JA7K 4LK0A 3RZOK 4Y7NK 4BBSK 4A3BC 3GTOK 3H0GK 4LJZA 1TWFC 2PPBA 4XLPA 2R92C 5C4XK 5FJ8K 2NVQK 3HOUC 3M4OK 1Y1VC 4KN4A 1SMYA 4AYBD 1TWGK 1XPPA 4A3GK 2R7ZC 5IP7K 5TMFA 4Y7NC 3RZDC 4A93C 3FKIK 3GTJK 4YFKA 2NVQC 3HOYK 3GTQK 5M5WK 2Y0SD 3GTLK 4A3EC 4QIWD 2YU9C 4C3JK 1TWGC 3WODA 4Q5SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NVT C;  4GZY A;  4C3H C;  5IYD C;  4A3B K;  4G7H A;  1ZYR A;  1TWF K;  4G7Z A;  2WAQ D;  5IP9 C;  2A6H A;  3HOU K;  3H3V D;  2PA8 D;  1R9T C;  3HOY C;  1K83 K;  4AYB L;  4C3J C;  3DXJ A;  5M5Y K;  2R7Z K;  3S14 C;  2JA7 C;  4JK1 A;  2E2I K;  3HOX K;  3GTG C;  3RZD K;  4A93 K;  2NVY C;  4BY1 C;  4C2M K;  4MEY A;  2Y0S L;  2E2H K;  3GTM K;  4A3L K;  4A3E K;  1K83 C;  5M5X K;  4OIR A;  2YU9 K;  2PMZ D;  3S1M C;  1IW7 A;  4A3J K;  1I3Q K;  2WB1 L;  1WCM C;  2NVT K;  3S16 K;  4C3H K;  5IYD K;  3S15 K;  3GTK C;  1I6V A;  2E2I C;  3HOX C;  3S14 K;  4ZH4 A;  2WAQ L;  1SFO K;  3S1N C;  4A3M C;  1YNN A;  2PA8 L;  5IP9 K;  4MQ9 A;  4C3I C;  4C2M C;  2E2H C;  3GTM C;  5TMC A;  5IYB C;  2B63 C;  3HOW C;  4A3L C;  1R9T K;  1YNJ A;  3HOZ K;  5D4D A;  3PO3 C;  3S17 C;  1I3Q C;  2JA6 K;  3S16 C;  5M3F K;  2NVX C;  3S15 C;  3GTG K;  4A3K C;  3K7A C;  2NVY K;  4BY1 K;  1SFO C;  3I4M K;  2JA5 C;  4Y52 C;  1TWC C;  3S1M K;  4NOI A;  1WCM K;  4XSX A;  5IYC C;  3HOV C;  3HOZ C;  4A3C C;  3GTP K;  1BDF A;  2BE5 A;  2JA6 C;  3GTK K;  4LLG A;  2A6E A;  4BY7 K;  3S1N K;  4A3M K;  4OIP A;  2E2J K;  4C3I K;  3I4M C;  4QIW L;  5IYB K;  2B63 K;  3HOW K;  4YG2 A;  2A69 A;  4OIN A;  4QJV A;  3S2H C;  3S17 K;  2CW0 A;  4XSZ A;  3PO3 K;  4MEX A;  3GTP C;  2NVX K;  5FLM K;  4A3K K;  3CQZ C;  3K7A K;  1TWA C;  4BY7 C;  5M3M K;  3S1R C;  2JA5 K;  3H3V L;  2E2J C;  2JA8 C;  5C4J C;  4Y52 K;  2R93 C;  1TWC K;  1I50 C;  4BXX C;  4YFN A;  1HQM A;  5IYC K;  5C3E K;  3HOV K;  4A3C K;  4X6A K;  1TWH C;  3HKZ D;  3EQL A;  4BBR C;  4A3F C;  5C44 C;  5FLM C;  3M3Y C;  4A3D C;  2PMZ L;  4XLN A;  4OIO A;  3S2D C;  3S2H K;  5C3E C;  1I6H C;  4X6A C;  4KN7 A;  3CQZ K;  3I4N C;  1TWA K;  2O5J A;  3S1R K;  3PO2 C;  4QJV B;  2JA8 K;  4KMU A;  5C4J K;  3S1Q C;  2R93 K;  3RZO C;  4BBS C;  4YFX A;  1I50 K;  4BXX K;  3GTO C;  3H0G C;  4LK1 A;  5C4X C;  3HKZ L;  4OIQ A;  1TWH K;  3M4O C;  4A3F K;  4BBR K;  4A3I K;  1Y1W K;  5C44 K;  2VUM K;  4Q4Z A;  3M3Y K;  2A68 A;  4A3G C;  2WB1 D;  5IP7 C;  4A3D K;  3S2D K;  2R92 K;  3FKI C;  3GTJ C;  4G7O A;  1I6H K;  3GTQ C;  3GTL C;  1Y1V K;  2O5I A;  2VUM C;  4A3I C;  1Y1W C;  3I4N K;  3PO2 K;  4A3J C;  3S1Q K;  2JA7 K;  4LK0 A;  3RZO K;  4Y7N K;  4BBS K;  4A3B C;  3GTO K;  3H0G K;  4LJZ A;  1TWF C;  2PPB A;  4XLP A;  2R92 C;  5C4X K;  5FJ8 K;  2NVQ K;  3HOU C;  3M4O K;  1Y1V C;  4KN4 A;  1SMY A;  4AYB D;  1TWG K;  1XPP A;  4A3G K;  2R7Z C;  5IP7 K;  5TMF A;  4Y7N C;  3RZD C;  4A93 C;  3FKI K;  3GTJ K;  4YFK A;  2NVQ C;  3HOY K;  3GTQ K;  5M5W K;  2Y0S D;  3GTL K;  4A3E C;  4QIW D;  2YU9 C;  4C3J K;  1TWG C;  3WOD A;  4Q5S A; 
#chains in the Genus database with same CATH topology
 2NVT C;  4KAT A;  1TWF A;  1ZYR A;  1DCH A;  2WAQ D;  5IP9 C;  3H3V D;  1R9T C;  3TFJ A;  3DXJ A;  2R7Z A;  3S14 C;  2JA7 C;  2GSU A;  1GE9 A;  2E2I K;  3HOX K;  4M1X A;  2E2H K;  3GTM K;  4BLA A;  2YU9 A;  2PMZ D;  4XCH A;  1JOE A;  1O28 A;  3LAJ A;  2NVT K;  3S16 K;  4KB2 A;  2GAH C;  3S1N C;  4A3M C;  5IP9 K;  3TFH A;  1C0A A;  1R9T K;  4A3L C;  1O27 A;  1I3Q C;  2JA6 K;  2D6F C;  3S15 C;  3TTG A;  3K7A C;  1B4A A;  4AH6 A;  3I4M K;  1B4B A;  1XZQ B;  4KAW X;  5HL7 S;  4XSX A;  5IYC C;  4WFA S;  3HOZ C;  3GTK A;  3N0B A;  2BE5 A;  4BY7 K;  3S1N K;  4A3M K;  5CHP A;  5DM6 S;  2B63 A;  3QX3 A;  3S2H C;  2NVX A;  3GTP C;  2XCO A;  3GEH A;  3K7A K;  1TWA C;  1O26 A;  3S1R C;  3AD9 C;  4P5B A;  2XCQ A;  1TWC A;  3DLL S;  2R93 C;  4YFN A;  1HQM A;  1RU0 A;  5IYC K;  1IS1 A;  1TWH C;  3HKZ D;  3EQL A;  4BBR C;  3GSI A;  3L4K A;  3LAP A;  4A3D C;  4GTE A;  4XLN A;  3S2D C;  3S2H K;  4KDD A;  3CQZ A;  1TWA K;  3S1R K;  2P5M A;  1I50 A;  5JFE A;  5E68 A;  2R93 K;  4YFX A;  1BS2 A;  2VUM A;  1TWH K;  2RGR A;  4BBR K;  4GTF A;  1PJ6 A;  1JVI A;  4G0U A;  4A3D K;  2R92 A;  2L5N A;  4J3N A;  4KB4 A;  3S2D K;  3GTJ C;  1Y1V A;  2O5I A;  2VUM C;  1EH1 A;  2FQO A;  3GTO A;  2R92 C;  2ZUE A;  1O25 A;  3HOU C;  1Y1V C;  4U67 S;  1UV7 A;  1KQ4 A;  2EBB A;  4A93 C;  3GTJ K;  3HOY K;  2NVQ C;  4KAS A;  2Y0S D;  4C3J K;  1TWG C;  1YCL A;  2PHC B;  5IYD C;  1ZVU A;  2A6H A;  3HOU K;  1K83 K;  5TJ3 A;  3GTG C;  4A93 K;  1DCO A;  2E2H A;  2NVY C;  3GTM A;  1IE0 A;  1WIH A;  3NUH A;  5M5X K;  4OIR A;  2WB1 L;  1WCM C;  1FEU A;  5IYD K;  1I6V A;  2E2I C;  3HOX C;  2WAQ L;  1SFO K;  1R9T A;  4C3I C;  2E2H C;  3GTM C;  1WOR A;  5TMC A;  5IYB C;  2JA7 A;  5D4D A;  3PO3 C;  3S17 C;  3S16 C;  3GTG K;  4A3K C;  5EGH A;  2NVY K;  2JA5 C;  1ZXO A;  1ISE A;  1WCM K;  3VA7 A;  3HOV C;  2JA6 C;  2GSN A;  2E2J K;  3ORE A;  2ZJP S;  3SZY A;  4C3I K;  3I4M C;  4QIW L;  5IYB K;  4YG2 A;  4IOA S;  4QJV A;  2P8T A;  5CJ9 A;  2CW0 A;  1I3Q A;  3S17 K;  3PO3 K;  4MEX A;  2KPU A;  2FQT A;  4A3K K;  1VRQ C;  4BY7 C;  5M3M K;  2JA5 K;  5C4J C;  1F93 A;  3HOV K;  4BKW A;  4RMF A;  4ILD A;  3M3Y C;  1WQF A;  1ZBS A;  1USM A;  1EI6 A;  1WOS A;  2KWA A;  3FHZ A;  4WJ3 M;  4OIO A;  2CFA B;  3GTP A;  3AH5 A;  1TWA A;  4KM8 A;  3I4N C;  4KMU A;  5C4J K;  2R93 A;  3AQP A;  1XZP A;  4BBS C;  1V5V A;  3H0G C;  1TWH A;  3HKZ L;  4A3I K;  1Y1W K;  4WFN S;  3M3Y K;  4A3G C;  4C45 A;  4PAB A;  5IOT A;  4G0W A;  3GTQ C;  3GTL C;  5HQH A;  4GTC A;  3I4N K;  1IBA A;  4IOC S;  3OEP A;  1XZQ A;  4LK0 A;  4BBS K;  2RH6 A;  4A3B C;  3FOE A;  3H0G K;  4LJZ A;  4P9S A;  2PPB A;  5FJ8 K;  3ADA C;  1ZQ1 C;  4G0V A;  1WOO A;  3GEE A;  4AYB D;  1XPP A;  4A3G K;  1O2B A;  3GTJ A;  3RZD C;  3GTQ K;  5M5W K;  3GTL K;  4FZB A;  3N0C A;  3WOD A;  4Q5S A;  3G4C A;  2KXY A;  4C3H C;  4A3B K;  4G7H A;  1VH2 A;  5L46 A;  3HOY C;  2PA8 D;  5DM7 S;  5JVO A;  4C3J C;  3HXA A;  1JQW A;  4JK1 A;  1O24 A;  1J6X A;  3RZD K;  4BY1 C;  4C2M K;  2Y0S L;  3A8K A;  1K83 C;  1TWG A;  3S1M C;  1IW7 A;  1BJT A;  4C3H K;  1SFO A;  4ZH4 A;  4MQ9 A;  4KAR A;  5M3F K;  3GTG A;  2NVY A;  4BY1 K;  1SFO C;  4LR2 A;  2ZUF A;  1O2F B;  4Y52 C;  3S1M K;  1WCM A;  4NOI A;  1HI9 A;  4KMD A;  4A3C C;  1BDF A;  2E2I A;  2A6E A;  1J98 A;  4OIP A;  3GEI A;  5JVH S;  1YX2 A;  1EK8 A;  3LYW A;  4OIN A;  4XSZ A;  3LPX A;  1PJ7 A;  2XCR B;  1L0W A;  5FLM K;  2JA5 A;  3H3V L;  2E2J C;  4Y52 K;  5C3E K;  1XXA A;  4A3C K;  2JA6 A;  4X6A K;  1IQ0 A;  1WQH A;  3Q3Q A;  2PMZ L;  2Y3P A;  2V6T A;  3SZZ A;  3V4G A;  3AD8 C;  4LOW A;  3PO2 C;  4QJV B;  1AB4 A;  1J6W A;  3S1Q C;  1USO A;  1WSR A;  1WSV A;  4KM9 A;  4LK1 A;  1G51 A;  1WOP A;  3L4J A;  4OIQ A;  2GAG C;  3T01 A;  2WB1 D;  1VGX A;  5IP7 C;  4LQY A;  3FKI C;  3CAG A;  4WJ4 A;  4A3I C;  1Y1W C;  3PO2 K;  3S1Q K;  4Y7N K;  3H0G A;  2W7V A;  1TWF C;  2ZFZ A;  3JST A;  4KMH A;  2ZJR S;  4BLB A;  1O29 A;  4KN4 A;  1SMY A;  1XZP B;  2GSO A;  2R7Z C;  5IOQ A;  5IP7 K;  1EFW A;  5IOS A;  5TMF A;  3FKI K;  2KQ1 A;  4YFK A;  1J6V A;  3T02 A;  3GTL A;  3GTQ A;  4A3E C;  4QIW D;  2YU9 C;  3PIO S;  1F7U A;  4A3J C;  2JA7 K;  3S14 K;  3AQO A;  4GZY A;  1DD5 A;  4O2D A;  1TWF K;  1VLO A;  4G7Z A;  4GT9 A;  2V6S A;  4GTD A;  4IO9 S;  4AYB L;  5M5Y K;  2R7Z K;  4WCE S;  4DDQ A;  2CFA A;  4WFB S;  4P5A A;  4MEY A;  4A3L K;  1IL2 A;  4A3E K;  2YU9 K;  4A3J K;  1I3Q K;  3A8I A;  1X31 C;  3S15 K;  3GTK C;  1YNN A;  2PA8 L;  4C2M C;  2B63 C;  3HOW C;  1YNJ A;  3HOZ K;  1XXB A;  4KC6 A;  2NVX C;  1VJE A;  4GFQ A;  3A8J A;  4KMA A;  1K83 A;  1INN A;  4GTA A;  1TWC C;  2L3U A;  3GIR A;  2JH3 A;  3BP3 A;  3OPF A;  3ERE D;  3GTP K;  3GTK K;  4LLG A;  3CF5 S;  3IPJ A;  2B63 K;  3HOW K;  2A69 A;  2V6U A;  1EQR A;  2NVX K;  3N3Y A;  3CQZ C;  1WQG A;  2JA8 C;  3T00 A;  3TFI A;  5HL8 A;  1TWC K;  1I50 C;  4BXX C;  1F7V A;  5EGE A;  4A3F C;  1PJ5 A;  5C44 C;  5FLM C;  5C3E C;  1I6H C;  2ZJQ S;  4X6A C;  4KN7 A;  3CQZ K;  4GTL A;  3S0X A;  5JVG S;  2O5J A;  2JA8 K;  4GTB A;  3RZO C;  1I50 K;  4BXX K;  3GTO C;  3AD7 C;  3BUE A;  5C4X C;  5IOR A;  3M4O C;  4A3F K;  2VUM K;  5C44 K;  4Q4Z A;  4FM9 A;  2A68 A;  4WIL A;  1XXC A;  3MML B;  3GDZ A;  2R92 K;  3BP8 C;  4G7O A;  1I6H K;  1Y1V K;  3PIP S;  3RZO K;  3GTO K;  5C4X K;  4XLP A;  2NVQ K;  3M4O K;  3FOF A;  4PAA A;  1TWG K;  1O2A A;  1DCP A;  3FKI A;  4Y7N C;  3G4A A;  1Y1W A;  1F9N A;  1BGW A;  4WF9 S; 
#chains in the Genus database with same CATH homology
 2NVT C;  4GZY A;  4C3H C;  5IYD C;  4A3B K;  4G7H A;  1ZYR A;  1TWF K;  4G7Z A;  2WAQ D;  5IP9 C;  2A6H A;  3HOU K;  3H3V D;  2PA8 D;  1R9T C;  3HOY C;  1K83 K;  4AYB L;  4C3J C;  3DXJ A;  5M5Y K;  2R7Z K;  3S14 C;  2JA7 C;  4JK1 A;  2E2I K;  3HOX K;  3GTG C;  3RZD K;  4A93 K;  2NVY C;  4BY1 C;  4C2M K;  4MEY A;  2Y0S L;  2E2H K;  3GTM K;  4A3L K;  4A3E K;  1K83 C;  5M5X K;  4OIR A;  2YU9 K;  2PMZ D;  3S1M C;  1IW7 A;  4A3J K;  1I3Q K;  2WB1 L;  1WCM C;  2NVT K;  3S16 K;  4C3H K;  5IYD K;  3S15 K;  3GTK C;  1I6V A;  2E2I C;  3HOX C;  3S14 K;  4ZH4 A;  2WAQ L;  1SFO K;  3S1N C;  4A3M C;  1YNN A;  2PA8 L;  5IP9 K;  4MQ9 A;  4C3I C;  4C2M C;  2E2H C;  3GTM C;  5TMC A;  5IYB C;  2B63 C;  3HOW C;  4A3L C;  1R9T K;  1YNJ A;  3HOZ K;  5D4D A;  3PO3 C;  3S17 C;  1I3Q C;  2JA6 K;  3S16 C;  5M3F K;  2NVX C;  3S15 C;  3GTG K;  4A3K C;  3K7A C;  2NVY K;  4BY1 K;  1SFO C;  3I4M K;  2JA5 C;  4Y52 C;  1TWC C;  3S1M K;  4NOI A;  1WCM K;  4XSX A;  5IYC C;  3HOV C;  3HOZ C;  4A3C C;  3GTP K;  1BDF A;  2BE5 A;  2JA6 C;  3GTK K;  4LLG A;  2A6E A;  4BY7 K;  3S1N K;  4A3M K;  4OIP A;  2E2J K;  4C3I K;  3I4M C;  4QIW L;  5IYB K;  2B63 K;  3HOW K;  4YG2 A;  2A69 A;  4OIN A;  4QJV A;  3S2H C;  3S17 K;  2CW0 A;  4XSZ A;  3PO3 K;  4MEX A;  3GTP C;  2NVX K;  5FLM K;  4A3K K;  3CQZ C;  3K7A K;  1TWA C;  4BY7 C;  5M3M K;  3S1R C;  2JA5 K;  3H3V L;  2E2J C;  2JA8 C;  5C4J C;  4Y52 K;  2R93 C;  1TWC K;  1I50 C;  4BXX C;  4YFN A;  1HQM A;  5IYC K;  5C3E K;  3HOV K;  4A3C K;  4X6A K;  1TWH C;  3HKZ D;  3EQL A;  4BBR C;  4A3F C;  5C44 C;  5FLM C;  3M3Y C;  4A3D C;  2PMZ L;  4XLN A;  4OIO A;  3S2D C;  3S2H K;  5C3E C;  1I6H C;  4X6A C;  4KN7 A;  3CQZ K;  3I4N C;  1TWA K;  2O5J A;  3S1R K;  3PO2 C;  4QJV B;  2JA8 K;  4KMU A;  5C4J K;  3S1Q C;  2R93 K;  3RZO C;  4BBS C;  4YFX A;  1I50 K;  4BXX K;  3GTO C;  3H0G C;  4LK1 A;  5C4X C;  3HKZ L;  4OIQ A;  1TWH K;  3M4O C;  4A3F K;  4BBR K;  4A3I K;  1Y1W K;  5C44 K;  2VUM K;  4Q4Z A;  3M3Y K;  2A68 A;  4A3G C;  2WB1 D;  5IP7 C;  4A3D K;  3S2D K;  2R92 K;  3FKI C;  3GTJ C;  4G7O A;  1I6H K;  3GTQ C;  3GTL C;  1Y1V K;  2O5I A;  2VUM C;  4A3I C;  1Y1W C;  3I4N K;  3PO2 K;  4A3J C;  3S1Q K;  2JA7 K;  4LK0 A;  3RZO K;  4Y7N K;  4BBS K;  4A3B C;  3GTO K;  3H0G K;  4LJZ A;  1TWF C;  2PPB A;  4XLP A;  2R92 C;  5C4X K;  5FJ8 K;  2NVQ K;  3HOU C;  3M4O K;  1Y1V C;  4KN4 A;  1SMY A;  4AYB D;  1TWG K;  1XPP A;  4A3G K;  2R7Z C;  5IP7 K;  5TMF A;  4Y7N C;  3RZD C;  4A93 C;  3FKI K;  3GTJ K;  4YFK A;  2NVQ C;  3HOY K;  3GTQ K;  5M5W K;  2Y0S D;  3GTL K;  4A3E C;  4QIW D;  2YU9 C;  4C3J K;  1TWG C;  3WOD A;  4Q5S A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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