1I74A

Streptococcus mutans inorganic pyrophosphatase
Total Genus 97
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
97
sequence length
309
structure length
309
Chain Sequence
SKILVFGHQNPDSDAIGSSMAYAYLKRQLGVDAQAVALGNPNEETAFVLDYFGIQAPPVVKSAQAEGAKQVILTDHNEFQQSIADIREVEVVEVVDHHRVANFETANPLYMRLEPVGSASSIVYRLYKENGVAIPKEIAGVMLSGLISDTLLLKSPTTHASDPAVAEDLAKIAGVDLQEYGLAMLKAGTNLASKTAAQLVDIDAKTFELNGSQVRVAQVNTVDINEVLERQNEIEEAIKASQAANGYSDFVLMITDILNSNSEILALGNNTDKVEAAFNFTLKNNHAFLAGAVSRKKQVVPQLTESFNG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords PROBABLE MANGANESE-DEPENDENT INORGANIC PYROPHOSPHATASE
publication title Crystal structure of Streptococcus mutans pyrophosphatase: a new fold for an old mechanism.
pubmed doi rcsb
source organism Streptococcus mutans
total genus 97
structure length 309
sequence length 309
chains with identical sequence B
ec nomenclature ec 3.6.1.1: Inorganic diphosphatase.
pdb deposition date 2001-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01368 DHH DHH family
A PF02833 DHHA2 DHHA2 domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.310.20 Alpha Beta Roll Diaminopimelate Epimerase; Chain A, domain 1 Diaminopimelate Epimerase; Chain A, domain 1 1i74A02
3.90.1640.10 Alpha Beta Alpha-Beta Complex inorganic pyrophosphatase (n-terminal core) inorganic pyrophosphatase (n-terminal core) 1i74A01
3DEVA 3W5WA 4PY9A 1WPPA 2IW4A 1K20A 2EB0A 2QB8A 1WPMA 2HAWA 1I74A 2ENXA 2QB6A 2QB7A 4LS9A 1K23A 1WPNA 4RPAA
chains in the Genus database with same CATH superfamily
1GQZA 2EB0A 2ENXA 3DEVA 5GKXA 2QB8A 1S7JA 3EKMA 4Q2HA 1T6KA 4RPAA 3WQZA 4JBDA 3ICJA 4FC5A 3EJXA 4JCIA 1WPMA 2HAWA 2KW7A 4JUUA 4GL6A 4Q60A 2QB6A 1SDJA 5HA4A 5H2YA 1W62A 1WPPA 4K7GB 1I74A 2PVZA 3G98A 5H2GA 1TM0A 1IR6A 5ANPA 4IK0A 1U1XA 1W61A 1XUBA 3FVEA 4JD7A 2LT2A 1YM5A 2ZXOA 2ZXPA 1WPNA 1QYAA 1U0KA 2GKJA 2QB7A 3EDNA 4J9WA 3PTJA 4OA3A 1U1WA 2H9FA 5GL2A 5M47A 4LG3A 2KPTA 1K23A 5IWEA 1QY9A 2ZVFA 4K8LA 4LB0A 4LS9A 3IGHX 2GKEA 4K7XA 4IJZA 4DWZA 3W5WA 4PY9A 2IW4A 2PW0A 1BWZA 3G7KA 1K20A 3PVHA 1XUAA 2AZPA 4DUNA 5GL4A 2Q9HA 2MPBA 2YMAA 2ZXRA 2OTNA 4J9XA 3PW9A 1U1VA 5GL3A 2Q9JA
chains in the Genus database with same CATH topology
1GQZA 2EB0A 2ENXA 3DEVA 5GKXA 2QB8A 1S7JA 3EKMA 4Q2HA 1T6KA 4RPAA 3WQZA 4JBDA 3ICJA 4FC5A 3EJXA 4JCIA 1WPMA 2HAWA 2KW7A 4JUUA 4GL6A 4Q60A 2QB6A 1SDJA 5HA4A 5H2YA 1W62A 1WPPA 4K7GB 1I74A 2PVZA 3G98A 5H2GA 1TM0A 1IR6A 5ANPA 4IK0A 1U1XA 1W61A 1XUBA 3FVEA 4JD7A 2LT2A 1YM5A 2ZXOA 2ZXPA 1WPNA 1QYAA 1U0KA 2GKJA 2QB7A 3EDNA 4J9WA 3PTJA 4OA3A 1U1WA 2H9FA 5GL2A 5M47A 4LG3A 2KPTA 1K23A 5IWEA 1QY9A 2ZVFA 4K8LA 4LB0A 4LS9A 3IGHX 2GKEA 4K7XA 4IJZA 4DWZA 3W5WA 4PY9A 2IW4A 2PW0A 1BWZA 3G7KA 1K20A 3PVHA 1XUAA 2AZPA 4DUNA 5GL4A 2Q9HA 2MPBA 2YMAA 2ZXRA 2OTNA 4J9XA 3PW9A 1U1VA 5GL3A 2Q9JA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3DEV A;  3W5W A;  4PY9 A;  1WPP A;  2IW4 A;  1K20 A;  2EB0 A;  2QB8 A;  1WPM A;  2HAW A;  1I74 A;  2ENX A;  2QB6 A;  2QB7 A;  4LS9 A;  1K23 A;  1WPN A;  4RPA A; 
#chains in the Genus database with same CATH topology
 1GQZ A;  2EB0 A;  2ENX A;  3DEV A;  5GKX A;  2QB8 A;  1S7J A;  3EKM A;  4Q2H A;  1T6K A;  4RPA A;  3WQZ A;  4JBD A;  3ICJ A;  4FC5 A;  3EJX A;  4JCI A;  1WPM A;  2HAW A;  2KW7 A;  4JUU A;  4GL6 A;  4Q60 A;  2QB6 A;  1SDJ A;  5HA4 A;  5H2Y A;  1W62 A;  1WPP A;  4K7G B;  1I74 A;  2PVZ A;  3G98 A;  5H2G A;  1TM0 A;  1IR6 A;  5ANP A;  4IK0 A;  1U1X A;  1W61 A;  1XUB A;  3FVE A;  4JD7 A;  2LT2 A;  1YM5 A;  2ZXO A;  2ZXP A;  1WPN A;  1QYA A;  1U0K A;  2GKJ A;  2QB7 A;  3EDN A;  4J9W A;  3PTJ A;  4OA3 A;  1U1W A;  2H9F A;  5GL2 A;  5M47 A;  4LG3 A;  2KPT A;  1K23 A;  5IWE A;  1QY9 A;  2ZVF A;  4K8L A;  4LB0 A;  4LS9 A;  3IGH X;  2GKE A;  4K7X A;  4IJZ A;  4DWZ A;  3W5W A;  4PY9 A;  2IW4 A;  2PW0 A;  1BWZ A;  3G7K A;  1K20 A;  3PVH A;  1XUA A;  2AZP A;  4DUN A;  5GL4 A;  2Q9H A;  2MPB A;  2YMA A;  2ZXR A;  2OTN A;  4J9X A;  3PW9 A;  1U1V A;  5GL3 A;  2Q9J A; 
#chains in the Genus database with same CATH homology
 1GQZ A;  2EB0 A;  2ENX A;  3DEV A;  5GKX A;  2QB8 A;  1S7J A;  3EKM A;  4Q2H A;  1T6K A;  4RPA A;  3WQZ A;  4JBD A;  3ICJ A;  4FC5 A;  3EJX A;  4JCI A;  1WPM A;  2HAW A;  2KW7 A;  4JUU A;  4GL6 A;  4Q60 A;  2QB6 A;  1SDJ A;  5HA4 A;  5H2Y A;  1W62 A;  1WPP A;  4K7G B;  1I74 A;  2PVZ A;  3G98 A;  5H2G A;  1TM0 A;  1IR6 A;  5ANP A;  4IK0 A;  1U1X A;  1W61 A;  1XUB A;  3FVE A;  4JD7 A;  2LT2 A;  1YM5 A;  2ZXO A;  2ZXP A;  1WPN A;  1QYA A;  1U0K A;  2GKJ A;  2QB7 A;  3EDN A;  4J9W A;  3PTJ A;  4OA3 A;  1U1W A;  2H9F A;  5GL2 A;  5M47 A;  4LG3 A;  2KPT A;  1K23 A;  5IWE A;  1QY9 A;  2ZVF A;  4K8L A;  4LB0 A;  4LS9 A;  3IGH X;  2GKE A;  4K7X A;  4IJZ A;  4DWZ A;  3W5W A;  4PY9 A;  2IW4 A;  2PW0 A;  1BWZ A;  3G7K A;  1K20 A;  3PVH A;  1XUA A;  2AZP A;  4DUN A;  5GL4 A;  2Q9H A;  2MPB A;  2YMA A;  2ZXR A;  2OTN A;  4J9X A;  3PW9 A;  1U1V A;  5GL3 A;  2Q9J A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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