1IUBA

Fucose-specific lectin from aleuria aurantia (hg-derivative form)
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
312
structure length
312
Chain Sequence
PTEFLYTSKIAAISWAATGGRQQRVYFQDLNGKIREAQRGGDNPWTGGSSQNVIGEAKLFSPLAAVTWKSAQGIQIRVYCVNKDNILSEFVYDGSKWITGQLGSVGVKVGSNSKLAALQWGGSESAPPNIRVYYQKSNGSGSSIHEYVWSGKWTAGASFGSTVPGTGIGATAIGPGRLRIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIAAISWGSTPNIRVYWQKGREELYEAAYGGSWNTPGQIKDASRPTPSLPDTFIAANSSGNIDISVFFQASGVSLQQWQWISGKGWSIGAVVPTGTPAGW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of Fucose-Specific Lectin from Aleuria aurantia Binding Ligands at Three of Its Five Sugar Recognition Sites
pubmed doi rcsb
molecule tags Sugar binding protein
source organism Aleuria aurantia
molecule keywords Fucose-specific lectin
total genus 62
structure length 312
sequence length 312
ec nomenclature
pdb deposition date 2002-03-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07938 Fungal_lectin Fungal fucose-specific lectin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.70 Mainly Beta 6 Propeller Neuraminidase Fucose-specific lectin 1iubA00
4CSDA 4AGTA 4D4UA 1OFZA 4AH4A 5EO8A 1IUBA 5EO7A 5H47A 4AHAA 4D52A 1IUCA 4D52B 4UOUA 4D52C 4C1YB 4C1YA 4AGIA
chains in the Genus database with same CATH superfamily
1N6DA 3H72A 4CPMA 3L6VA 3GVJA 4ZGCA 1NNCA 3TIBA 5D9CA 1IVDA 2GVVA 2P4OA 1NNAA 5D9BA 2F26A 4H53A 4D52B 1V04A 5GX1A 1E1AA 1EUUA 2ISMA 1N7DA 4UF7A 3II7A 4FQ4A 4XILA 1INYA 1QBIA 3JU4A 2BZDA 4JMLA 4GDJA 5F9TA 4K1JA 3K3AA 1IUCA 2HTRA 1NCCN 4FZHA 4B7RA 1NSBA 1W1XA 2VVZA 3B69A 4GZXA 2F27A 3S2KA 2HQSA 4GNCA 1USXA 5EO8A 3V65B 1NCAN 4NCSA 3TI3A 1W8NA 2F13A 2XZKA 3BEQA 4YW3A 1F8DA 2QWAA 4QN7A 5GX2A 2FPBA 2QWGA 3TI8A 1MS3A 1MS1A 2XCYA 1IVBA 2BATA 3G4HA 2OJHA 4O5TA 4ZLRA 2IAQA 2JKBA 4HHQA 3DASA 4XHXA 1NN2A 2AEQA 1W8OA 2POOA 2QWKA 3ALXA 2DG1A 1INWA 1ZI0A 1MS4A 2HTUA 4XE9A 4FPOB 4HZXA 4M4UA 3B7EA 2HTQA 1VCUA 5FZNA 5HUKA 3ZGDA 3H6JA 4K1IA 4I00A 1USRA 4K3YA 5HUMA 4B7QA 4D8SA 1IUBA 1W0OA 2ZW9A 1E8TA 2IATA 4MWVA 3WWAA 1V3BA 5F72C 1Z4XA 4YZ5A 4FP2A 4XJUA 4HHOA 1MWEA 2XZIA 1KITA 4XOGA 2FPCA 4WA4A 3H73A 3SILA 4MWJA 1NPEA 5JYYA 4X47A 2HTVA 4QN5A 1IVFA 3NN9A 3GVLA 1N1YA 1N1VA 2H2UA 1N6FA 2IAWA 2QWHA 3GVKA 1XOEA 1V0EA 2G8SA 4XYXA 1A4QA 2RKCA 3W09A 3HRPA 4MWYA 1Z4WA 3WDZA 2HU4A 4GN8A 4AHAA 1NSDA 4KS1A 1CQ1A 2QWJA 3KYAA 3ADEA 5FNSA 1MS5A 4ASCA 3TICA 4CHBA 1CRUA 2H2NA 2YA6A 5FZJA 5B2CA 3CKZA 3AMSA 3K36A 2GHSA 1WCSA 2YDPA 4FPLA 4GN9A 2QWBA 2F29A 1MS0A 2W5OA 2HT5A 3IAXA 4MWXA 4XHBA 1N1SA 1V3DA 3S94A 2IAUA 2W8BA 4KS5A 4BBWA 4GZQA 3D12A 4B7NA 4FOWA 1B9VA 4FJ6A 4MJUA 1DIMA 3S8ZA 1B9TA 2F12A 5FNUA 3PJQA 2FLUX 1CVMA 4Q6KA 5FNQA 1K32A 1X2RA 4MJVA 4K1KA 3K37A 3G4EA 2IASA 4WEFA 3CL2A 4GEZA 4CPOA 1L7GA 4M4VA 3LI3A 3VNGA 4XJQA 2QWDA 2HT8A 4CPYA 2VK6A 3SREA 1A4GA 2DYHA 3SLIA 4QN6A 1EURA 1Z4VA 1S0IA 4MX0A 4CSDA 1L7FA 1S18A 1SNTA 3TI6A 3I1CA 2QWEA 4D52C 4FPYA 2F0ZA 2YDTA 1XOGA 5FNRA 2HTWA 1WP5A 4FP3A 4WA3A 3WW9A 2W8BB 4HIZA 3OPZA 1CRZA 2VSMA 3O9KA 3TC9A 1NNBA 5GX4A 1SUUA 3TI5A 2QWCA 3A71A 3VNHA 3ALWA 2XZJA 4IN4A 2HT7A 2W5NA 4XMBA 1W20A 1WCQA 2HTYA 4M4NA 1V0FA 5D9DA 4FVKA 4MZEA 2Z32A 3O4PA 5HUGA 2VAQA 2DG0A 1MR5A 1EUTA 2C4AA 1RWLA 4QN3A 4FPEA 2QWFA 1ZGKA 1SO7A 5B2DA 2A75A 4MZAA 4QNPA 4J9TA 4FOQA 1V0ZA 4KS3A 2FP9A 3A9GA 2VK7A 3S8VA 2B8HA 4GNBA 2IAOA 4XJAA 1NCBN 4H52A 4YW2A 2VW1A 2IAPA 1Z4ZA 3BYCA 2ZB6A 2F24A 2SIMA 3O9JA 3SOBB 2SLIA 4Q1UA 1E8UA 1PJXA 2VPJA 4HZYA 2DSOA 4AH4A 4IFNX 4MWQA 4R40A 1E8VA 3NO0A 3UC1A 1NMCA 3P5BL 4GZOA 3ZGCA 2YA4A 4D52A 3T1EA 4FOVA 4GN7A 3A72A 3HLIA 5EO7A 4PWZA 1F8BA 4FPKA 4CPZA 4B7JA 1MZ5A 1INHA 4HZZA 1F8EA 3SRGA 2IAXA 1W21A 1BJIA 4SLIA 1IVEA 4D4UA 2C4LA 5FNTA 4MWWA 3H71A 1N6EA 1A14N 4X49A 4HZVA 3Q6PA 4QN4A 4FOYA 2F10A 1S1DA 3WN7A 2GVUA 5NN9A 4M3MA 2AEPA 4L7BA 5HUNA 1POOA 4G3NA 4XMAA 4C1YA 1NMAN 4AGIA 2YA8A 3TIAA 4CPNA 4N1BA 5HX0A 3LI4A 1MZ6A 2BF6A 2FP8A 2IARA 1RWIA 1IVGA 4XJWA 1V3EA 2GVXA 2VSKA 1U6DX 3DR2A 1C5KA 4YZ1A 1OFZA 1Z4YA 2HU0A 2GVWA 4DGRA 1EUSA 2FHRA 1INGA 4MWRA 1F8CA 4FPCA 1Q7FA 2SILA 1INFA 4XJ8A 4KS2A 4FPFA 3K38A 5CGJA 1L7HA 4K1HA 2V91A 2F11A 4NN9A 4KS4A 4JF7A 1IVCA 1VCJA 3V64C 4FPGA 2VW0A 4XJRA 4YZ2A 1QLGA 3U0SA 4UOUA 4NC5A 5M1ZA 4GNAA 2YA5A 3V1SA 1SLIA 1H6LA 2AH2A 3A9HA 4WA5A 1INXA 4C1YB 3Q6KA 3Q6TA 3SOVA 1V3CA 1SLLA 3SALA 4YW5A 3NSSA 4XJZA 2F28A 1X2JA 4XMIA 2W38A 4IFLX 4GDIA 2YA7A 5GX3A 4YW4A 1NCDN 2IAVA 4IQKA 1INVA 3INBA 4A0PA 2X9MA 4GB1A 1S0JA 2VWDA 4HZWA 4YZ4A 4GZPA 1B9SA 3TI4A 4GZWA 4IMBA 3SANA 2BERA 3AMRA 5FWWA 1DILA 4B7MA 5GX5A 3FW0A 2VK5A 2CMLA 2XN4A 2QWIA 4HW6A 3E5ZA 3HLHA 1Z50A 4IFJA 3KGGA 2ZB5A 1NMBN 3CYEA 4CH9A 2VW2A 4YW1A 4WEGA 3FVZA 1IJQA 2WOZA 4GJTA 4DG6A 1MS9A 3SOQA 7NN9A 4L7CA 3K39A 1MS8A 5H47A 4MC7A 4X6KA 5GTQA 2QE8A 2IVZA 4FPJA 4YZ3A 4L7DA 4GZTA 2W20A 2ZZKA 4AGTA 4GZSA 2AGSA 4MWLA 4IYGA 3LI5A 6NN9A 4ZY3A 1C9UA 4XIOA 4O5SA 5EX7A 4XJ9A 3CL0A 2ZWAA 4X4AA 1W0PA 4YY8A 4MWUA 4XIKA 4CPLA 1NSCA 1N1TA 2F25A 3D11A 4FPHA 1V2IA
chains in the Genus database with same CATH topology
4CSDA 4AGTA 4D4UA 1OFZA 4AH4A 5EO8A 1IUBA 5EO7A 5H47A 4AHAA 4D52A 1IUCA 4D52B 4UOUA 4D52C 4C1YB 4C1YA 4AGIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CSD A;  4AGT A;  4D4U A;  1OFZ A;  4AH4 A;  5EO8 A;  1IUB A;  5EO7 A;  5H47 A;  4AHA A;  4D52 A;  1IUC A;  4D52 B;  4UOU A;  4D52 C;  4C1Y B;  4C1Y A;  4AGI A; 
#chains in the Genus database with same CATH topology
 1N6D A;  3H72 A;  4CPM A;  3L6V A;  3GVJ A;  4ZGC A;  1NNC A;  3TIB A;  5D9C A;  1IVD A;  2GVV A;  2P4O A;  1NNA A;  5D9B A;  2F26 A;  4H53 A;  4D52 B;  1V04 A;  5GX1 A;  1E1A A;  1EUU A;  2ISM A;  1N7D A;  4UF7 A;  3II7 A;  4FQ4 A;  4XIL A;  1INY A;  1QBI A;  3JU4 A;  2BZD A;  4JML A;  4GDJ A;  5F9T A;  4K1J A;  3K3A A;  1IUC A;  2HTR A;  1NCC N;  4FZH A;  4B7R A;  1NSB A;  1W1X A;  2VVZ A;  3B69 A;  4GZX A;  2F27 A;  3S2K A;  2HQS A;  4GNC A;  1USX A;  5EO8 A;  3V65 B;  1NCA N;  4NCS A;  3TI3 A;  1W8N A;  2F13 A;  2XZK A;  3BEQ A;  4YW3 A;  1F8D A;  2QWA A;  4QN7 A;  5GX2 A;  2FPB A;  2QWG A;  3TI8 A;  1MS3 A;  1MS1 A;  2XCY A;  1IVB A;  2BAT A;  3G4H A;  2OJH A;  4O5T A;  4ZLR A;  2IAQ A;  2JKB A;  4HHQ A;  3DAS A;  4XHX A;  1NN2 A;  2AEQ A;  1W8O A;  2POO A;  2QWK A;  3ALX A;  2DG1 A;  1INW A;  1ZI0 A;  1MS4 A;  2HTU A;  4XE9 A;  4FPO B;  4HZX A;  4M4U A;  3B7E A;  2HTQ A;  1VCU A;  5FZN A;  5HUK A;  3ZGD A;  3H6J A;  4K1I A;  4I00 A;  1USR A;  4K3Y A;  5HUM A;  4B7Q A;  4D8S A;  1IUB A;  1W0O A;  2ZW9 A;  1E8T A;  2IAT A;  4MWV A;  3WWA A;  1V3B A;  5F72 C;  1Z4X A;  4YZ5 A;  4FP2 A;  4XJU A;  4HHO A;  1MWE A;  2XZI A;  1KIT A;  4XOG A;  2FPC A;  4WA4 A;  3H73 A;  3SIL A;  4MWJ A;  1NPE A;  5JYY A;  4X47 A;  2HTV A;  4QN5 A;  1IVF A;  3NN9 A;  3GVL A;  1N1Y A;  1N1V A;  2H2U A;  1N6F A;  2IAW A;  2QWH A;  3GVK A;  1XOE A;  1V0E A;  2G8S A;  4XYX A;  1A4Q A;  2RKC A;  3W09 A;  3HRP A;  4MWY A;  1Z4W A;  3WDZ A;  2HU4 A;  4GN8 A;  4AHA A;  1NSD A;  4KS1 A;  1CQ1 A;  2QWJ A;  3KYA A;  3ADE A;  5FNS A;  1MS5 A;  4ASC A;  3TIC A;  4CHB A;  1CRU A;  2H2N A;  2YA6 A;  5FZJ A;  5B2C A;  3CKZ A;  3AMS A;  3K36 A;  2GHS A;  1WCS A;  2YDP A;  4FPL A;  4GN9 A;  2QWB A;  2F29 A;  1MS0 A;  2W5O A;  2HT5 A;  3IAX A;  4MWX A;  4XHB A;  1N1S A;  1V3D A;  3S94 A;  2IAU A;  2W8B A;  4KS5 A;  4BBW A;  4GZQ A;  3D12 A;  4B7N A;  4FOW A;  1B9V A;  4FJ6 A;  4MJU A;  1DIM A;  3S8Z A;  1B9T A;  2F12 A;  5FNU A;  3PJQ A;  2FLU X;  1CVM A;  4Q6K A;  5FNQ A;  1K32 A;  1X2R A;  4MJV A;  4K1K A;  3K37 A;  3G4E A;  2IAS A;  4WEF A;  3CL2 A;  4GEZ A;  4CPO A;  1L7G A;  4M4V A;  3LI3 A;  3VNG A;  4XJQ A;  2QWD A;  2HT8 A;  4CPY A;  2VK6 A;  3SRE A;  1A4G A;  2DYH A;  3SLI A;  4QN6 A;  1EUR A;  1Z4V A;  1S0I A;  4MX0 A;  4CSD A;  1L7F A;  1S18 A;  1SNT A;  3TI6 A;  3I1C A;  2QWE A;  4D52 C;  4FPY A;  2F0Z A;  2YDT A;  1XOG A;  5FNR A;  2HTW A;  1WP5 A;  4FP3 A;  4WA3 A;  3WW9 A;  2W8B B;  4HIZ A;  3OPZ A;  1CRZ A;  2VSM A;  3O9K A;  3TC9 A;  1NNB A;  5GX4 A;  1SUU A;  3TI5 A;  2QWC A;  3A71 A;  3VNH A;  3ALW A;  2XZJ A;  4IN4 A;  2HT7 A;  2W5N A;  4XMB A;  1W20 A;  1WCQ A;  2HTY A;  4M4N A;  1V0F A;  5D9D A;  4FVK A;  4MZE A;  2Z32 A;  3O4P A;  5HUG A;  2VAQ A;  2DG0 A;  1MR5 A;  1EUT A;  2C4A A;  1RWL A;  4QN3 A;  4FPE A;  2QWF A;  1ZGK A;  1SO7 A;  5B2D A;  2A75 A;  4MZA A;  4QNP A;  4J9T A;  4FOQ A;  1V0Z A;  4KS3 A;  2FP9 A;  3A9G A;  2VK7 A;  3S8V A;  2B8H A;  4GNB A;  2IAO A;  4XJA A;  1NCB N;  4H52 A;  4YW2 A;  2VW1 A;  2IAP A;  1Z4Z A;  3BYC A;  2ZB6 A;  2F24 A;  2SIM A;  3O9J A;  3SOB B;  2SLI A;  4Q1U A;  1E8U A;  1PJX A;  2VPJ A;  4HZY A;  2DSO A;  4AH4 A;  4IFN X;  4MWQ A;  4R40 A;  1E8V A;  3NO0 A;  3UC1 A;  1NMC A;  3P5B L;  4GZO A;  3ZGC A;  2YA4 A;  4D52 A;  3T1E A;  4FOV A;  4GN7 A;  3A72 A;  3HLI A;  5EO7 A;  4PWZ A;  1F8B A;  4FPK A;  4CPZ A;  4B7J A;  1MZ5 A;  1INH A;  4HZZ A;  1F8E A;  3SRG A;  2IAX A;  1W21 A;  1BJI A;  4SLI A;  1IVE A;  4D4U A;  2C4L A;  5FNT A;  4MWW A;  3H71 A;  1N6E A;  1A14 N;  4X49 A;  4HZV A;  3Q6P A;  4QN4 A;  4FOY A;  2F10 A;  1S1D A;  3WN7 A;  2GVU A;  5NN9 A;  4M3M A;  2AEP A;  4L7B A;  5HUN A;  1POO A;  4G3N A;  4XMA A;  4C1Y A;  1NMA N;  4AGI A;  2YA8 A;  3TIA A;  4CPN A;  4N1B A;  5HX0 A;  3LI4 A;  1MZ6 A;  2BF6 A;  2FP8 A;  2IAR A;  1RWI A;  1IVG A;  4XJW A;  1V3E A;  2GVX A;  2VSK A;  1U6D X;  3DR2 A;  1C5K A;  4YZ1 A;  1OFZ A;  1Z4Y A;  2HU0 A;  2GVW A;  4DGR A;  1EUS A;  2FHR A;  1ING A;  4MWR A;  1F8C A;  4FPC A;  1Q7F A;  2SIL A;  1INF A;  4XJ8 A;  4KS2 A;  4FPF A;  3K38 A;  5CGJ A;  1L7H A;  4K1H A;  2V91 A;  2F11 A;  4NN9 A;  4KS4 A;  4JF7 A;  1IVC A;  1VCJ A;  3V64 C;  4FPG A;  2VW0 A;  4XJR A;  4YZ2 A;  1QLG A;  3U0S A;  4UOU A;  4NC5 A;  5M1Z A;  4GNA A;  2YA5 A;  3V1S A;  1SLI A;  1H6L A;  2AH2 A;  3A9H A;  4WA5 A;  1INX A;  4C1Y B;  3Q6K A;  3Q6T A;  3SOV A;  1V3C A;  1SLL A;  3SAL A;  4YW5 A;  3NSS A;  4XJZ A;  2F28 A;  1X2J A;  4XMI A;  2W38 A;  4IFL X;  4GDI A;  2YA7 A;  5GX3 A;  4YW4 A;  1NCD N;  2IAV A;  4IQK A;  1INV A;  3INB A;  4A0P A;  2X9M A;  4GB1 A;  1S0J A;  2VWD A;  4HZW A;  4YZ4 A;  4GZP A;  1B9S A;  3TI4 A;  4GZW A;  4IMB A;  3SAN A;  2BER A;  3AMR A;  5FWW A;  1DIL A;  4B7M A;  5GX5 A;  3FW0 A;  2VK5 A;  2CML A;  2XN4 A;  2QWI A;  4HW6 A;  3E5Z A;  3HLH A;  1Z50 A;  4IFJ A;  3KGG A;  2ZB5 A;  1NMB N;  3CYE A;  4CH9 A;  2VW2 A;  4YW1 A;  4WEG A;  3FVZ A;  1IJQ A;  2WOZ A;  4GJT A;  4DG6 A;  1MS9 A;  3SOQ A;  7NN9 A;  4L7C A;  3K39 A;  1MS8 A;  5H47 A;  4MC7 A;  4X6K A;  5GTQ A;  2QE8 A;  2IVZ A;  4FPJ A;  4YZ3 A;  4L7D A;  4GZT A;  2W20 A;  2ZZK A;  4AGT A;  4GZS A;  2AGS A;  4MWL A;  4IYG A;  3LI5 A;  6NN9 A;  4ZY3 A;  1C9U A;  4XIO A;  4O5S A;  5EX7 A;  4XJ9 A;  3CL0 A;  2ZWA A;  4X4A A;  1W0P A;  4YY8 A;  4MWU A;  4XIK A;  4CPL A;  1NSC A;  1N1T A;  2F25 A;  3D11 A;  4FPH A;  1V2I A; 
#chains in the Genus database with same CATH homology
 4CSD A;  4AGT A;  4D4U A;  1OFZ A;  4AH4 A;  5EO8 A;  1IUB A;  5EO7 A;  5H47 A;  4AHA A;  4D52 A;  1IUC A;  4D52 B;  4UOU A;  4D52 C;  4C1Y B;  4C1Y A;  4AGI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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