1IUQA

The 1.55 a crystal structure of glycerol-3-phosphate acyltransferase
Total Genus 113
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
113
sequence length
367
structure length
357
Chain Sequence
ASHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTADVSLSQPW
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Glycerol-3-Phosphate Acyltransferase
publication title Substrate recognition and selectivity of plant glycerol-3-phosphate acyltransferases (GPATs) from Cucurbita moscata and Spinacea oleracea.
pubmed doi rcsb
source organism Cucurbita moschata
molecule tags Transferase
total genus 113
structure length 357
sequence length 367
ec nomenclature ec 2.3.1.15: Glycerol-3-phosphate 1-O-acyltransferase.
pdb deposition date 2002-03-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01553 Acyltransferase Acyltransferase
A PF14829 GPAT_N Glycerol-3-phosphate acyltransferase N-terminal
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.50 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A 1iuqA01
3.40.1130.10 Alpha Beta 3-Layer(aba) Sandwich Glycerol-3-phosphate (1)-acyltransferase Glycerol-3-phosphate (1)-acyltransferase 1iuqA02
1K30A 1IUQA
chains in the Genus database with same CATH superfamily
2KOQA 1AF8A 4PH0A 3G29A 2XT1A 3CD6P 5F2NA 2XXMA 4UHPB 2QNWA 2GDYA 5DCKA 2LF4A 2K2QA 2LOLA 2EFJA 2MY5A 2M5RA 1GXHA 3EJEA 5EW5E 4BPFA 1GPJA 2JYLA 5CZDB 1VQ6P 2KGAA 2AFDA 3GKLC 4XRQA 1JJ2O 2GZEA 2GZFA 1X3OA 2PEJA 1D1DA 2FQ2A 5HGNA 2ROQA 3G28A 1YJNP 3CCRP 2CG5B 2KWLA 5KP6B 1BXIA 3CC2P 3B4QA 2K92A 2OTJP 1RO2A 1NQ4A 2JYGA 2GYKA 3I55P 1EMVA 4QKOA 1VQNP 4H2WC 1VQ5P 2JU1A 4R0MA 3CCQP 2DNWA 2GDXA 2AF8A 2OTLP 1T8KA 1M6EX 3CMEP 1IMQA 3GZMA 2QEXP 1IUQA 1A8OA 2JB0A 3G1IA 3CCEP 4PXHB 3EJDA 1FR2A 2MVVA 2P9XA 2N5HA 4DG9A 3DS2A 3WBHA 2VLQA 4COPA 2K0DX 2KG6A 1BAJA 1HQBA 1M74A 4U0CA 1YIJP 2FACA 2ONTA 2EIAA 3H47A 4U0DA 1YJWP 2K93A 2MR7A 2MVUA 1N8RQ 3Q20A 1KC8Q 3DS1A 1ZNVA 5KP8B 1UJZA 3CCLP 1HY8A 3RG2A 4COCA 1VQLP 2PEKA 3CC4P 2L9FA 1YJ9P 2NO8A 5HV8A 3NY7B 2PY8A 1NJIQ 1VHNA 2JBGA 3G1GA 2JO0A 1F80D 2CWOA 1VQ9P 2LKIA 2KR5A 2GZGA 2WPTA 2MD9A 2JAZA 1VQKP 2FADA 1Q81Q 2EG5A 1IMPA 2L4BA 3G71P 4F37A 2KW2A 3CCJP 3E2DA 2L0QA 3GZLA 3MGEA 1ACPA 3EJBA 4XFYA 3B5IA 5KP7B 2VSQA 1Z6MA 4U0EA 2LIWA 5BS1A 1M90Q 1VQPP 1QVFO 2BHVA 3DS4A 4XFZA 4IPYA 2BUOA 3RG6C 1GXGA 2LPKA 1ZMBA 2PENA 3CMAP 3LMOA 1VQ7P 2M8PA 1S72P 4U0BA 1KD1Q 2N5IA 3DPHA 4CA3A 3G26A 3LRYA 2K0XA 1K73Q 2GDWA 2KGCA 2KGDA 2LIUA 2E1MA 1M6NA 4NEOA 3CC7P 1E6JP 2N98A 2K0YA 2K94A 2XZ0D 5HGLA 1KLPA 2M8NA 1RO0A 2KORA 5F2KA 2MR8A 2GZIA 1UNKA 2CQ8A 2JU2A 2Z45A 2N6YA 2Z44A 1MZ8A 1CEIA 2KG8A 3DTJA 2EHTA 3DS5A 2KGEA 1M1KQ 4HKGA 3I56P 2L22A 5HGOA 2FQ0A 2EHSA 2KOSA 1E0HA 2XV6A 2JQ4A 4PH1A 4MRTC 1W2BO 5I4TG 2PEIA 3U43A 3H0DA 2VLNA 1VQOP 1KQSO 1VKUA 5HGMA 3CE7A 2QA4P 2VLPA 2JGPA 2M8LA 2MF4A 1DNYA 3CXCO 2X2BA 2PNGA 3CCSP 1YI2P 3HZQA 2CGQA 2LMLA 3NTEA 7CEIA 4WYMA 3H4EA 4BPGA 2XZ1C 2FAEA 2N6ZA 2OARA 2KODA 1QVGO 4QNBA 2PEMA 1VQ4P 4U0FA 2KOOA 1L0IA 4BPHA 3M1MA 3G0VA 1K8AQ 2CNRA 3CPWO 1L0HA 4IZ6A 2KOPA 2FHSC 3CCUP 2K5XA 2PEOA 5F2OA 2FVEA 1K9MQ 3G6EP 3G21A 1Q82Q 1Q86Q 1OR5A 4M0IA 4GR2A 3DS0A 4H2XC 3HYBA 1RNIA 2N50A 3GJNA 1AUMA 1Q7YQ 2PEQA 1YITP 1DV5A 4PWVB 5EJDA 1QRJA 2LTEA 4U0AA 3P05A 1AYIA 5JPAA 2FVFA 3DS3A 1A43A 2AFEA 4GR6A 1EIAA 2FQ1A 1EOQA 1K30A 2L6EA 3CCMP 3VRLC 2Z46A 3G4SP 2AVAA 5BS2A 4H2YC 5HVCA 2VLOA 1VQ8P 2LL8A 1YHQP 1VQMP 2DGYA 4XFXA 2FVAA 3OW2O 2KG9A 2ERHA 4XROA 3CCVP 2GZJA
chains in the Genus database with same CATH topology
3NTEA 4WYMA 1M74A 3H4EA 4U0CA 4PH0A 1YIJP 3G29A 2ONTA 1K73Q 2EIAA 3H47A 2XT1A 3CD6P 4U0DA 1YJWP 5F2NA 2XXMA 2E1MA 1M6NA 5DCKA 2LF4A 2OARA 3CC7P 1E6JP 2KODA 2EFJA 1QVGO 4QNBA 1N8RQ 2PEMA 3Q20A 1VQ4P 1KC8Q 4U0FA 5HGLA 3DS1A 2M8NA 1RO0A 3M1MA 3G0VA 3CCLP 1K8AQ 5F2KA 4COCA 1VQLP 2JYLA 2PEKA 1VQ6P 3CC4P 1YJ9P 3CPWO 4XRQA 1JJ2O 2PEJA 1D1DA 3CCUP 2Z45A 5HGNA 2PY8A 2Z44A 1NJIQ 2PEOA 3G28A 3DTJA 1YJNP 3CCRP 3G1GA 3DS5A 5F2OA 1K9MQ 3G6EP 1M1KQ 3G21A 1Q82Q 2JO0A 1Q86Q 2CWOA 4M0IA 3I56P 3CC2P 4GR2A 3DS0A 1VQ9P 5HGOA 3HYBA 2OTJP 1RO2A 2XV6A 2JYGA 1RNIA 4PH1A 1W2BO 1AUMA 1Q7YQ 2PEQA 1VQKP 1Q81Q 2EG5A 3I55P 3G71P 5I4TG 1YITP 2PEIA 3CCJP 3H0DA 3E2DA 1VQNP 3MGEA 1QRJA 1VQOP 1KQSO 1VQ5P 5HGMA 4U0AA 3CCQP 3P05A 5JPAA 4XFYA 3B5IA 3DS3A 2QA4P 1A43A 2OTLP 1M6EX 4GR6A 3CMEP 4U0EA 2M8LA 2QEXP 1EIAA 1EOQA 1K30A 5BS1A 1IUQA 1VQPP 1A8OA 1M90Q 2L6EA 3CCMP 1QVFO 3VRLC 2BHVA 3G1IA 3CCEP 2Z46A 3DS4A 4XFZA 3G4SP 5BS2A 4IPYA 3G26A 2BUOA 2P9XA 1VQ8P 3CXCO 3RG6C 1YHQP 3DS2A 3WBHA 1VQMP 1ZMBA 2DGYA 2PENA 4XFXA 3CMAP 1VQ7P 2M8PA 1S72P 4U0BA 4COPA 1KD1Q 3OW2O 3DPHA 3CCSP 1YI2P 4XROA 3CCVP 1BAJA 3HZQA 3LRYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K30 A;  1IUQ A; 
#chains in the Genus database with same CATH topology
 2KOQ A;  1AF8 A;  4PH0 A;  3G29 A;  2XT1 A;  3CD6 P;  5F2N A;  2XXM A;  4UHP B;  2QNW A;  2GDY A;  5DCK A;  2LF4 A;  2K2Q A;  2LOL A;  2EFJ A;  2MY5 A;  2M5R A;  1GXH A;  3EJE A;  5EW5 E;  4BPF A;  1GPJ A;  2JYL A;  5CZD B;  1VQ6 P;  2KGA A;  2AFD A;  3GKL C;  4XRQ A;  1JJ2 O;  2GZE A;  2GZF A;  1X3O A;  2PEJ A;  1D1D A;  2FQ2 A;  5HGN A;  2ROQ A;  3G28 A;  1YJN P;  3CCR P;  2CG5 B;  2KWL A;  5KP6 B;  1BXI A;  3CC2 P;  3B4Q A;  2K92 A;  2OTJ P;  1RO2 A;  1NQ4 A;  2JYG A;  2GYK A;  3I55 P;  1EMV A;  4QKO A;  1VQN P;  4H2W C;  1VQ5 P;  2JU1 A;  4R0M A;  3CCQ P;  2DNW A;  2GDX A;  2AF8 A;  2OTL P;  1T8K A;  1M6E X;  3CME P;  1IMQ A;  3GZM A;  2QEX P;  1IUQ A;  1A8O A;  2JB0 A;  3G1I A;  3CCE P;  4PXH B;  3EJD A;  1FR2 A;  2MVV A;  2P9X A;  2N5H A;  4DG9 A;  3DS2 A;  3WBH A;  2VLQ A;  4COP A;  2K0D X;  2KG6 A;  1BAJ A;  1HQB A;  1M74 A;  4U0C A;  1YIJ P;  2FAC A;  2ONT A;  2EIA A;  3H47 A;  4U0D A;  1YJW P;  2K93 A;  2MR7 A;  2MVU A;  1N8R Q;  3Q20 A;  1KC8 Q;  3DS1 A;  1ZNV A;  5KP8 B;  1UJZ A;  3CCL P;  1HY8 A;  3RG2 A;  4COC A;  1VQL P;  2PEK A;  3CC4 P;  2L9F A;  1YJ9 P;  2NO8 A;  5HV8 A;  3NY7 B;  2PY8 A;  1NJI Q;  1VHN A;  2JBG A;  3G1G A;  2JO0 A;  1F80 D;  2CWO A;  1VQ9 P;  2LKI A;  2KR5 A;  2GZG A;  2WPT A;  2MD9 A;  2JAZ A;  1VQK P;  2FAD A;  1Q81 Q;  2EG5 A;  1IMP A;  2L4B A;  3G71 P;  4F37 A;  2KW2 A;  3CCJ P;  3E2D A;  2L0Q A;  3GZL A;  3MGE A;  1ACP A;  3EJB A;  4XFY A;  3B5I A;  5KP7 B;  2VSQ A;  1Z6M A;  4U0E A;  2LIW A;  5BS1 A;  1M90 Q;  1VQP P;  1QVF O;  2BHV A;  3DS4 A;  4XFZ A;  4IPY A;  2BUO A;  3RG6 C;  1GXG A;  2LPK A;  1ZMB A;  2PEN A;  3CMA P;  3LMO A;  1VQ7 P;  2M8P A;  1S72 P;  4U0B A;  1KD1 Q;  2N5I A;  3DPH A;  4CA3 A;  3G26 A;  3LRY A;  2K0X A;  1K73 Q;  2GDW A;  2KGC A;  2KGD A;  2LIU A;  2E1M A;  1M6N A;  4NEO A;  3CC7 P;  1E6J P;  2N98 A;  2K0Y A;  2K94 A;  2XZ0 D;  5HGL A;  1KLP A;  2M8N A;  1RO0 A;  2KOR A;  5F2K A;  2MR8 A;  2GZI A;  1UNK A;  2CQ8 A;  2JU2 A;  2Z45 A;  2N6Y A;  2Z44 A;  1MZ8 A;  1CEI A;  2KG8 A;  3DTJ A;  2EHT A;  3DS5 A;  2KGE A;  1M1K Q;  4HKG A;  3I56 P;  2L22 A;  5HGO A;  2FQ0 A;  2EHS A;  2KOS A;  1E0H A;  2XV6 A;  2JQ4 A;  4PH1 A;  4MRT C;  1W2B O;  5I4T G;  2PEI A;  3U43 A;  3H0D A;  2VLN A;  1VQO P;  1KQS O;  1VKU A;  5HGM A;  3CE7 A;  2QA4 P;  2VLP A;  2JGP A;  2M8L A;  2MF4 A;  1DNY A;  3CXC O;  2X2B A;  2PNG A;  3CCS P;  1YI2 P;  3HZQ A;  2CGQ A;  2LML A;  3NTE A;  7CEI A;  4WYM A;  3H4E A;  4BPG A;  2XZ1 C;  2FAE A;  2N6Z A;  2OAR A;  2KOD A;  1QVG O;  4QNB A;  2PEM A;  1VQ4 P;  4U0F A;  2KOO A;  1L0I A;  4BPH A;  3M1M A;  3G0V A;  1K8A Q;  2CNR A;  3CPW O;  1L0H A;  4IZ6 A;  2KOP A;  2FHS C;  3CCU P;  2K5X A;  2PEO A;  5F2O A;  2FVE A;  1K9M Q;  3G6E P;  3G21 A;  1Q82 Q;  1Q86 Q;  1OR5 A;  4M0I A;  4GR2 A;  3DS0 A;  4H2X C;  3HYB A;  1RNI A;  2N50 A;  3GJN A;  1AUM A;  1Q7Y Q;  2PEQ A;  1YIT P;  1DV5 A;  4PWV B;  5EJD A;  1QRJ A;  2LTE A;  4U0A A;  3P05 A;  1AYI A;  5JPA A;  2FVF A;  3DS3 A;  1A43 A;  2AFE A;  4GR6 A;  1EIA A;  2FQ1 A;  1EOQ A;  1K30 A;  2L6E A;  3CCM P;  3VRL C;  2Z46 A;  3G4S P;  2AVA A;  5BS2 A;  4H2Y C;  5HVC A;  2VLO A;  1VQ8 P;  2LL8 A;  1YHQ P;  1VQM P;  2DGY A;  4XFX A;  2FVA A;  3OW2 O;  2KG9 A;  2ERH A;  4XRO A;  3CCV P;  2GZJ A; 
#chains in the Genus database with same CATH homology
 3NTE A;  4WYM A;  1M74 A;  3H4E A;  4U0C A;  4PH0 A;  1YIJ P;  3G29 A;  2ONT A;  1K73 Q;  2EIA A;  3H47 A;  2XT1 A;  3CD6 P;  4U0D A;  1YJW P;  5F2N A;  2XXM A;  2E1M A;  1M6N A;  5DCK A;  2LF4 A;  2OAR A;  3CC7 P;  1E6J P;  2KOD A;  2EFJ A;  1QVG O;  4QNB A;  1N8R Q;  2PEM A;  3Q20 A;  1VQ4 P;  1KC8 Q;  4U0F A;  5HGL A;  3DS1 A;  2M8N A;  1RO0 A;  3M1M A;  3G0V A;  3CCL P;  1K8A Q;  5F2K A;  4COC A;  1VQL P;  2JYL A;  2PEK A;  1VQ6 P;  3CC4 P;  1YJ9 P;  3CPW O;  4XRQ A;  1JJ2 O;  2PEJ A;  1D1D A;  3CCU P;  2Z45 A;  5HGN A;  2PY8 A;  2Z44 A;  1NJI Q;  2PEO A;  3G28 A;  3DTJ A;  1YJN P;  3CCR P;  3G1G A;  3DS5 A;  5F2O A;  1K9M Q;  3G6E P;  1M1K Q;  3G21 A;  1Q82 Q;  2JO0 A;  1Q86 Q;  2CWO A;  4M0I A;  3I56 P;  3CC2 P;  4GR2 A;  3DS0 A;  1VQ9 P;  5HGO A;  3HYB A;  2OTJ P;  1RO2 A;  2XV6 A;  2JYG A;  1RNI A;  4PH1 A;  1W2B O;  1AUM A;  1Q7Y Q;  2PEQ A;  1VQK P;  1Q81 Q;  2EG5 A;  3I55 P;  3G71 P;  5I4T G;  1YIT P;  2PEI A;  3CCJ P;  3H0D A;  3E2D A;  1VQN P;  3MGE A;  1QRJ A;  1VQO P;  1KQS O;  1VQ5 P;  5HGM A;  4U0A A;  3CCQ P;  3P05 A;  5JPA A;  4XFY A;  3B5I A;  3DS3 A;  2QA4 P;  1A43 A;  2OTL P;  1M6E X;  4GR6 A;  3CME P;  4U0E A;  2M8L A;  2QEX P;  1EIA A;  1EOQ A;  1K30 A;  5BS1 A;  1IUQ A;  1VQP P;  1A8O A;  1M90 Q;  2L6E A;  3CCM P;  1QVF O;  3VRL C;  2BHV A;  3G1I A;  3CCE P;  2Z46 A;  3DS4 A;  4XFZ A;  3G4S P;  5BS2 A;  4IPY A;  3G26 A;  2BUO A;  2P9X A;  1VQ8 P;  3CXC O;  3RG6 C;  1YHQ P;  3DS2 A;  3WBH A;  1VQM P;  1ZMB A;  2DGY A;  2PEN A;  4XFX A;  3CMA P;  1VQ7 P;  2M8P A;  1S72 P;  4U0B A;  4COP A;  1KD1 Q;  3OW2 O;  3DPH A;  3CCS P;  1YI2 P;  4XRO A;  3CCV P;  1BAJ A;  3HZQ A;  3LRY A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...