1IY6A

Solution structure of omsvp3 variant, p14c/n39c
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
54
structure length
54
Chain Sequence
AVSVDCSEYPKCACTMEYRPLCGSDNKTYGNKCNFCCAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords OMSVP3
publication title Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond
pubmed doi rcsb
source organism Lophura nycthemera
total genus 10
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 2002-07-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 1iy6A00
1PPFI 1LR7A 2GKVA 2ERWA 2NU3I 2OVOA 2SGFI 3HH2C 1SGEI 1CHOI 1TIHA 2GKRI 1KMAA 1AN1I 2JYYA 1LR9A 1H0ZA 2SGPI 3SEKC 1BUSA 1OMTA 2SGQI 1HJAI 2GKTI 1N13A 4HGUA 1LR8A 1DS3I 2B0UC 2SGEI 3TJQA 1UUCA 3B4VC 1M8BA 5DAEA 1SGNI 4OVOA 2NU0I 2N17A 2KMRA 1TUSA 1Z7KB 1DS2I 2KMPA 1CT2I 2ARPF 2KCXA 2LEOA 2F3CI 1CT0I 1SGDI 1OYVI 1TGSI 3QTLD 1Y1CA 2N52A 1NUBA 1FYBA 1SGYI 1CSOI 1CGJI 2M5XA 2JZMA 2QQDA 2P6AC 2QQCA 1TBQR 2NU2I 2V53A 3SGBI 1YTPA 1UVFA 2KMOA 1CE3A 2JXDA 3SGQI 1OVOA 1SGRI 1OMUA 2NU4I 4GI3C 1CGII 1UVGA 2NU1I 1CT4I 1HDLA 1PJUA 1TBRR 1PCEA 1YU6C 5JHWC 2SGDI 2XRCA 1SGQI 2N71A 2KMQA 1IW4A 2WCYA 1M8CA 1Y1BA 4SGBI 1BMOA 3OVOA 1TURA 1IY5A 1HPTA 1R0RI 1MT1A 1IY6A 2BUSA 1SGPI
chains in the Genus database with same CATH superfamily
1PPFI 2A20A 5FUXA 3UEYA 2WGCA 2RC4A 1KBFA 1LR7A 2GKVA 2ERWA 1K7VA 2YUUA 4A24A 1K7UA 3UGDA 2ENZA 2ODDA 3TOBA 1XBTA 2NU3I 2J87A 1Q9BA 1X4SA 2JA1A 1SGEI 2OVOA 2SGFI 1CHOI 2UVOA 2K9HA 3HH2C 1TIHA 2GVIA 2GKRI 3BJIA 1KMAA 1AN1I 2JYYA 1LR9A 1P9GA 2SGPI 3QWPA 3VDUA 1H0ZA 3SEKC 5E3PA 2V1CA 1OMTA 2SGQI 1HJAI 2GKTI 4B6DA 1BUSA 3E59A 1N13A 4HGUA 1LR8A 2LUYA 5FUVA 7WGAA 5FUYA 2JW6A 9WGAA 3E2IA 1DS3I 2B0UC 3MEKA 2SGEI 3TJQA 1HEVA 2CJSC 2ORVA 2LB7A 1W4RA 1V1IA 1UUCA 3B4VC 3CXLA 2X52A 1M8BA 5DAEA 1SGNI 2QQEA 5CCMA 2QQ0A 2ORWA 5EX3A 1U5KA 3OXFA 3R5BA 2W0TA 4WP4A 3QAHA 4OVOA 2NU0I 2ENNA 4E1PA 4E1RA 2N17A 3GOXA 2KMRA 1S20A 1Y8FA 5EX0A 1TUSA 3UEJA 1Z7KB 1DS2I 2E73A 2KMPA 1ULKA 3VE5A 4JCVE 1CT2I 1ULMA 1PTRA 2ARPF 2KCXA 2LEOA 3D00A 2F3CI 3RU0A 3UFFA 1CT0I 1FAQA 2QPOA 1SGDI 1OYVI 1TGSI 1WGTA 2UZ3A 3QTLD 4FKDA 1WTJA 2WVJA 3OL0A 1Y1CA 2N52A 2L8EA 3FSYA 1NUBA 1XA6A 2GIVA 3UGLA 1FYBA 1MJ9A 3TOAA 3VDPA 1SGYI 3FC3A 3OXLA 1RFHA 1CSOI 3R5AA 2J9RA 1CGJI 2YQPA 3UOEA 1KBEA 1FARA 2JZMA 1R79A 2M5XA 2P6AC 2B8TA 1TBQR 2QQCA 2QQDA 2ROWA 2DKVA 1K7TA 1ULNA 3R5DA 2NU2I 5E3RA 2V53A 3SGBI 1YTPA 4UXIA 4UXJA 1TOTA 1UVFA 1V1HA 2KMOA 5HI7A 3OXGA 1WKXA 1CE3A 2JXDA 1WGCA 1FY7A 5CCLA 1TBNA 3SGQI 5FUWA 1OVOA 1SGRI 1OMUA 2L7XA 2NU4I 3PDNA 4GI3C 3TO9A 1CGII 1W3SA 1UVGA 1MJAA 2NU1I 2V1CC 3UGIA 2X3TA 4MPIA 1CT4I 1HDLA 2OZUA 1PJUA 1TBRR 1P9ZA 1PCEA 2N1AB 1NXUA 1VDDA 5J8CA 2DB6A 1X74A 1YU6C 1UHAA 2RIJA 5JHWC 5HQ8A 5E3QA 2SGDI 4UXHA 2XRCA 4L9MA 1SGQI 2N71A 2KMQA 4DNCA 2ELIA 2CWFA 5J8FA 1IW4A 2VRWB 2CWHA 2WCYA 2E5RA 2DIPA 3KY9A 1M8CA 1Z2IA 1Y1BA 1PTQA 2Y0MA 4SGBI 2OD1A 1BMOA 3OVOA 4AMLA 1TURA 1TBOA 1HPTA 1R0RI 1IY5A 3R5CA 2PQ8A 3TO7A 2CWGA 2OU2A 2FNFX 1MT1A 1XX6A 3TO6A 1IY6A 1MJBA 2BUSA 1SGPI 3FSXA
chains in the Genus database with same CATH topology
1PPFI 2A20A 5FUXA 3UEYA 1KBFA 1LR7A 2GKVA 2ERWA 2YUUA 4A24A 3UGDA 2ENZA 2ODDA 1XBTA 2NU3I 2J87A 2OVOA 1X4SA 2JA1A 1SGEI 2SGFI 3HH2C 1CHOI 2K9HA 1TIHA 2GVIA 2GKRI 3BJIA 1KMAA 1AN1I 2JYYA 1LR9A 3QWPA 2SGPI 3VDUA 1H0ZA 3SEKC 2V1CA 1OMTA 2SGQI 1HJAI 2GKTI 4B6DA 1BUSA 3E59A 1N13A 4HGUA 1LR8A 2LUYA 5FUVA 5FUYA 2JW6A 3E2IA 1DS3I 2B0UC 3MEKA 2SGEI 3TJQA 2CJSC 2ORVA 1W4RA 1V1IA 1UUCA 3B4VC 3CXLA 1M8BA 5DAEA 1SGNI 2QQEA 5CCMA 2QQ0A 2ORWA 5EX3A 1U5KA 3OXFA 2W0TA 4OVOA 2NU0I 2ENNA 4E1PA 4E1RA 2N17A 3GOXA 2KMRA 1Y8FA 5EX0A 1TUSA 3UEJA 1Z7KB 1DS2I 2E73A 2KMPA 3VE5A 4JCVE 1CT2I 1PTRA 2ARPF 2KCXA 2LEOA 3D00A 2F3CI 3RU0A 3UFFA 1CT0I 1FAQA 2QPOA 1SGDI 1OYVI 1TGSI 2UZ3A 3QTLD 4FKDA 2WVJA 3OL0A 1Y1CA 2N52A 2L8EA 1NUBA 1XA6A 3UGLA 1FYBA 3VDPA 1SGYI 3OXLA 1RFHA 1CSOI 2J9RA 1CGJI 2YQPA 3FC3A 1KBEA 1FARA 2JZMA 1R79A 2M5XA 2P6AC 2B8TA 1TBQR 2QQCA 2QQDA 2ROWA 2NU2I 2V53A 3SGBI 1YTPA 4UXIA 4UXJA 1TOTA 1UVFA 1V1HA 2KMOA 5HI7A 3OXGA 1CE3A 2JXDA 5CCLA 1TBNA 3SGQI 5FUWA 1OVOA 1SGRI 1OMUA 2L7XA 2NU4I 3PDNA 4GI3C 1CGII 1W3SA 1UVGA 3UGIA 2NU1I 2V1CC 1CT4I 1HDLA 1PJUA 1TBRR 1PCEA 2N1AB 1VDDA 2DB6A 1X74A 1YU6C 5JHWC 5HQ8A 2SGDI 4UXHA 2XRCA 4L9MA 1SGQI 2N71A 2KMQA 2ELIA 1IW4A 2VRWB 2WCYA 2E5RA 2DIPA 3KY9A 1M8CA 1Y1BA 1PTQA 4SGBI 2OD1A 1BMOA 3OVOA 1TURA 1TBOA 1HPTA 1R0RI 1IY5A 2FNFX 1MT1A 1XX6A 1IY6A 2BUSA 1SGPI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1PPF I;  1LR7 A;  2GKV A;  2ERW A;  2NU3 I;  2OVO A;  2SGF I;  3HH2 C;  1SGE I;  1CHO I;  1TIH A;  2GKR I;  1KMA A;  1AN1 I;  2JYY A;  1LR9 A;  1H0Z A;  2SGP I;  3SEK C;  1BUS A;  1OMT A;  2SGQ I;  1HJA I;  2GKT I;  1N13 A;  4HGU A;  1LR8 A;  1DS3 I;  2B0U C;  2SGE I;  3TJQ A;  1UUC A;  3B4V C;  1M8B A;  5DAE A;  1SGN I;  4OVO A;  2NU0 I;  2N17 A;  2KMR A;  1TUS A;  1Z7K B;  1DS2 I;  2KMP A;  1CT2 I;  2ARP F;  2KCX A;  2LEO A;  2F3C I;  1CT0 I;  1SGD I;  1OYV I;  1TGS I;  3QTL D;  1Y1C A;  2N52 A;  1NUB A;  1FYB A;  1SGY I;  1CSO I;  1CGJ I;  2M5X A;  2JZM A;  2QQD A;  2P6A C;  2QQC A;  1TBQ R;  2NU2 I;  2V53 A;  3SGB I;  1YTP A;  1UVF A;  2KMO A;  1CE3 A;  2JXD A;  3SGQ I;  1OVO A;  1SGR I;  1OMU A;  2NU4 I;  4GI3 C;  1CGI I;  1UVG A;  2NU1 I;  1CT4 I;  1HDL A;  1PJU A;  1TBR R;  1PCE A;  1YU6 C;  5JHW C;  2SGD I;  2XRC A;  1SGQ I;  2N71 A;  2KMQ A;  1IW4 A;  2WCY A;  1M8C A;  1Y1B A;  4SGB I;  1BMO A;  3OVO A;  1TUR A;  1IY5 A;  1HPT A;  1R0R I;  1MT1 A;  1IY6 A;  2BUS A;  1SGP I; 
#chains in the Genus database with same CATH topology
 1PPF I;  2A20 A;  5FUX A;  3UEY A;  2WGC A;  2RC4 A;  1KBF A;  1LR7 A;  2GKV A;  2ERW A;  1K7V A;  2YUU A;  4A24 A;  1K7U A;  3UGD A;  2ENZ A;  2ODD A;  3TOB A;  1XBT A;  2NU3 I;  2J87 A;  1Q9B A;  1X4S A;  2JA1 A;  1SGE I;  2OVO A;  2SGF I;  1CHO I;  2UVO A;  2K9H A;  3HH2 C;  1TIH A;  2GVI A;  2GKR I;  3BJI A;  1KMA A;  1AN1 I;  2JYY A;  1LR9 A;  1P9G A;  2SGP I;  3QWP A;  3VDU A;  1H0Z A;  3SEK C;  5E3P A;  2V1C A;  1OMT A;  2SGQ I;  1HJA I;  2GKT I;  4B6D A;  1BUS A;  3E59 A;  1N13 A;  4HGU A;  1LR8 A;  2LUY A;  5FUV A;  7WGA A;  5FUY A;  2JW6 A;  9WGA A;  3E2I A;  1DS3 I;  2B0U C;  3MEK A;  2SGE I;  3TJQ A;  1HEV A;  2CJS C;  2ORV A;  2LB7 A;  1W4R A;  1V1I A;  1UUC A;  3B4V C;  3CXL A;  2X52 A;  1M8B A;  5DAE A;  1SGN I;  2QQE A;  5CCM A;  2QQ0 A;  2ORW A;  5EX3 A;  1U5K A;  3OXF A;  3R5B A;  2W0T A;  4WP4 A;  3QAH A;  4OVO A;  2NU0 I;  2ENN A;  4E1P A;  4E1R A;  2N17 A;  3GOX A;  2KMR A;  1S20 A;  1Y8F A;  5EX0 A;  1TUS A;  3UEJ A;  1Z7K B;  1DS2 I;  2E73 A;  2KMP A;  1ULK A;  3VE5 A;  4JCV E;  1CT2 I;  1ULM A;  1PTR A;  2ARP F;  2KCX A;  2LEO A;  3D00 A;  2F3C I;  3RU0 A;  3UFF A;  1CT0 I;  1FAQ A;  2QPO A;  1SGD I;  1OYV I;  1TGS I;  1WGT A;  2UZ3 A;  3QTL D;  4FKD A;  1WTJ A;  2WVJ A;  3OL0 A;  1Y1C A;  2N52 A;  2L8E A;  3FSY A;  1NUB A;  1XA6 A;  2GIV A;  3UGL A;  1FYB A;  1MJ9 A;  3TOA A;  3VDP A;  1SGY I;  3FC3 A;  3OXL A;  1RFH A;  1CSO I;  3R5A A;  2J9R A;  1CGJ I;  2YQP A;  3UOE A;  1KBE A;  1FAR A;  2JZM A;  1R79 A;  2M5X A;  2P6A C;  2B8T A;  1TBQ R;  2QQC A;  2QQD A;  2ROW A;  2DKV A;  1K7T A;  1ULN A;  3R5D A;  2NU2 I;  5E3R A;  2V53 A;  3SGB I;  1YTP A;  4UXI A;  4UXJ A;  1TOT A;  1UVF A;  1V1H A;  2KMO A;  5HI7 A;  3OXG A;  1WKX A;  1CE3 A;  2JXD A;  1WGC A;  1FY7 A;  5CCL A;  1TBN A;  3SGQ I;  5FUW A;  1OVO A;  1SGR I;  1OMU A;  2L7X A;  2NU4 I;  3PDN A;  4GI3 C;  3TO9 A;  1CGI I;  1W3S A;  1UVG A;  1MJA A;  2NU1 I;  2V1C C;  3UGI A;  2X3T A;  4MPI A;  1CT4 I;  1HDL A;  2OZU A;  1PJU A;  1TBR R;  1P9Z A;  1PCE A;  2N1A B;  1NXU A;  1VDD A;  5J8C A;  2DB6 A;  1X74 A;  1YU6 C;  1UHA A;  2RIJ A;  5JHW C;  5HQ8 A;  5E3Q A;  2SGD I;  4UXH A;  2XRC A;  4L9M A;  1SGQ I;  2N71 A;  2KMQ A;  4DNC A;  2ELI A;  2CWF A;  5J8F A;  1IW4 A;  2VRW B;  2CWH A;  2WCY A;  2E5R A;  2DIP A;  3KY9 A;  1M8C A;  1Z2I A;  1Y1B A;  1PTQ A;  2Y0M A;  4SGB I;  2OD1 A;  1BMO A;  3OVO A;  4AML A;  1TUR A;  1TBO A;  1HPT A;  1R0R I;  1IY5 A;  3R5C A;  2PQ8 A;  3TO7 A;  2CWG A;  2OU2 A;  2FNF X;  1MT1 A;  1XX6 A;  3TO6 A;  1IY6 A;  1MJB A;  2BUS A;  1SGP I;  3FSX A; 
#chains in the Genus database with same CATH homology
 1PPF I;  2A20 A;  5FUX A;  3UEY A;  1KBF A;  1LR7 A;  2GKV A;  2ERW A;  2YUU A;  4A24 A;  3UGD A;  2ENZ A;  2ODD A;  1XBT A;  2NU3 I;  2J87 A;  2OVO A;  1X4S A;  2JA1 A;  1SGE I;  2SGF I;  3HH2 C;  1CHO I;  2K9H A;  1TIH A;  2GVI A;  2GKR I;  3BJI A;  1KMA A;  1AN1 I;  2JYY A;  1LR9 A;  3QWP A;  2SGP I;  3VDU A;  1H0Z A;  3SEK C;  2V1C A;  1OMT A;  2SGQ I;  1HJA I;  2GKT I;  4B6D A;  1BUS A;  3E59 A;  1N13 A;  4HGU A;  1LR8 A;  2LUY A;  5FUV A;  5FUY A;  2JW6 A;  3E2I A;  1DS3 I;  2B0U C;  3MEK A;  2SGE I;  3TJQ A;  2CJS C;  2ORV A;  1W4R A;  1V1I A;  1UUC A;  3B4V C;  3CXL A;  1M8B A;  5DAE A;  1SGN I;  2QQE A;  5CCM A;  2QQ0 A;  2ORW A;  5EX3 A;  1U5K A;  3OXF A;  2W0T A;  4OVO A;  2NU0 I;  2ENN A;  4E1P A;  4E1R A;  2N17 A;  3GOX A;  2KMR A;  1Y8F A;  5EX0 A;  1TUS A;  3UEJ A;  1Z7K B;  1DS2 I;  2E73 A;  2KMP A;  3VE5 A;  4JCV E;  1CT2 I;  1PTR A;  2ARP F;  2KCX A;  2LEO A;  3D00 A;  2F3C I;  3RU0 A;  3UFF A;  1CT0 I;  1FAQ A;  2QPO A;  1SGD I;  1OYV I;  1TGS I;  2UZ3 A;  3QTL D;  4FKD A;  2WVJ A;  3OL0 A;  1Y1C A;  2N52 A;  2L8E A;  1NUB A;  1XA6 A;  3UGL A;  1FYB A;  3VDP A;  1SGY I;  3OXL A;  1RFH A;  1CSO I;  2J9R A;  1CGJ I;  2YQP A;  3FC3 A;  1KBE A;  1FAR A;  2JZM A;  1R79 A;  2M5X A;  2P6A C;  2B8T A;  1TBQ R;  2QQC A;  2QQD A;  2ROW A;  2NU2 I;  2V53 A;  3SGB I;  1YTP A;  4UXI A;  4UXJ A;  1TOT A;  1UVF A;  1V1H A;  2KMO A;  5HI7 A;  3OXG A;  1CE3 A;  2JXD A;  5CCL A;  1TBN A;  3SGQ I;  5FUW A;  1OVO A;  1SGR I;  1OMU A;  2L7X A;  2NU4 I;  3PDN A;  4GI3 C;  1CGI I;  1W3S A;  1UVG A;  3UGI A;  2NU1 I;  2V1C C;  1CT4 I;  1HDL A;  1PJU A;  1TBR R;  1PCE A;  2N1A B;  1VDD A;  2DB6 A;  1X74 A;  1YU6 C;  5JHW C;  5HQ8 A;  2SGD I;  4UXH A;  2XRC A;  4L9M A;  1SGQ I;  2N71 A;  2KMQ A;  2ELI A;  1IW4 A;  2VRW B;  2WCY A;  2E5R A;  2DIP A;  3KY9 A;  1M8C A;  1Y1B A;  1PTQ A;  4SGB I;  2OD1 A;  1BMO A;  3OVO A;  1TUR A;  1TBO A;  1HPT A;  1R0R I;  1IY5 A;  2FNF X;  1MT1 A;  1XX6 A;  1IY6 A;  2BUS A;  1SGP I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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