1K0EA

The crystal structure of aminodeoxychorismate synthase from formate grown crystals
Total Genus 135
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
135
sequence length
451
structure length
437
Chain Sequence
TLSPAVITLLWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPFQGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDVNARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIFCSAGGGIVADSQEEAEYQETFDKVNRILKQLEK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structure of Escherichia coli aminodeoxychorismate synthase: architectural conservation and diversity in chorismate-utilizing enzymes.
pubmed doi rcsb
molecule tags Lyase
source organism Escherichia coli
molecule keywords p-aminobenzoate synthase component I
total genus 135
structure length 437
sequence length 451
chains with identical sequence B
ec nomenclature ec 2.6.1.85: Aminodeoxychorismate synthase.
pdb deposition date 2001-09-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00425 Chorismate_bind chorismate binding enzyme
A PF04715 Anth_synt_I_N Anthranilate synthase component I, N terminal region
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.120.10 Alpha Beta 4-Layer Sandwich Anthranilate synthase Anthranilate synthase 1k0eA00
4GRHA 1I1QA 5JZDA 3BZNA 1I7QA 5JY8A 1QDLA 3R74A 3RV6A 3R76A 3RV9A 2FN1A 5JXZA 1K0GA 3R75A 2EUAA 3OS6A 2FN0A 3VEHA 5JY4A 5CWAA 3BZMA 3LOGA 2G5FA 1I7SA 2I6YA 3RV8A 3RV7A 3HWOA 1K0EA 5JY9A 3ST6A 5KCKA 3GSEA 3H9MA 5JY4B
chains in the Genus database with same CATH superfamily
4GRHA 1I1QA 5JZDA 3BZNA 1I7QA 5JY8A 1QDLA 3R74A 3RV6A 3R76A 3RV9A 2FN1A 5JXZA 1K0GA 3R75A 2EUAA 3OS6A 2FN0A 3VEHA 5JY4A 5CWAA 3BZMA 3LOGA 2G5FA 1I7SA 2I6YA 3RV8A 3RV7A 3HWOA 1K0EA 5JY9A 3ST6A 5KCKA 3GSEA 3H9MA 5JY4B
chains in the Genus database with same CATH topology
4GRHA 1I1QA 5JZDA 3BZNA 1I7QA 5JY8A 1QDLA 3R74A 3RV6A 3R76A 3RV9A 2FN1A 5JXZA 1K0GA 3R75A 2EUAA 3OS6A 2FN0A 3VEHA 5JY4A 5CWAA 3BZMA 3LOGA 2G5FA 1I7SA 2I6YA 3RV8A 3RV7A 3HWOA 1K0EA 5JY9A 3ST6A 5KCKA 3GSEA 3H9MA 5JY4B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4GRH A;  1I1Q A;  5JZD A;  3BZN A;  1I7Q A;  5JY8 A;  1QDL A;  3R74 A;  3RV6 A;  3R76 A;  3RV9 A;  2FN1 A;  5JXZ A;  1K0G A;  3R75 A;  2EUA A;  3OS6 A;  2FN0 A;  3VEH A;  5JY4 A;  5CWA A;  3BZM A;  3LOG A;  2G5F A;  1I7S A;  2I6Y A;  3RV8 A;  3RV7 A;  3HWO A;  1K0E A;  5JY9 A;  3ST6 A;  5KCK A;  3GSE A;  3H9M A;  5JY4 B; 
#chains in the Genus database with same CATH topology
 4GRH A;  1I1Q A;  5JZD A;  3BZN A;  1I7Q A;  5JY8 A;  1QDL A;  3R74 A;  3RV6 A;  3R76 A;  3RV9 A;  2FN1 A;  5JXZ A;  1K0G A;  3R75 A;  2EUA A;  3OS6 A;  2FN0 A;  3VEH A;  5JY4 A;  5CWA A;  3BZM A;  3LOG A;  2G5F A;  1I7S A;  2I6Y A;  3RV8 A;  3RV7 A;  3HWO A;  1K0E A;  5JY9 A;  3ST6 A;  5KCK A;  3GSE A;  3H9M A;  5JY4 B; 
#chains in the Genus database with same CATH homology
 4GRH A;  1I1Q A;  5JZD A;  3BZN A;  1I7Q A;  5JY8 A;  1QDL A;  3R74 A;  3RV6 A;  3R76 A;  3RV9 A;  2FN1 A;  5JXZ A;  1K0G A;  3R75 A;  2EUA A;  3OS6 A;  2FN0 A;  3VEH A;  5JY4 A;  5CWA A;  3BZM A;  3LOG A;  2G5F A;  1I7S A;  2I6Y A;  3RV8 A;  3RV7 A;  3HWO A;  1K0E A;  5JY9 A;  3ST6 A;  5KCK A;  3GSE A;  3H9M A;  5JY4 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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