1K4LA

Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase in complex with two manganese ions
Total Genus 66
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
66
sequence length
216
structure length
216
Chain Sequence
FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
molecule keywords 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase
publication title Structural definition of the active site and catalytic mechanism of 3,4-dihydroxy-2-butanone-4-phosphate synthase.
pubmed doi rcsb
source organism Magnaporthe grisea
total genus 66
structure length 216
sequence length 216
ec nomenclature ec 4.1.99.12: 3,4-dihydroxy-2-butanone-4-phosphate synthase.
pdb deposition date 2001-10-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00926 DHBP_synthase 3,4-dihydroxy-2-butanone 4-phosphate synthase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.870.10 Alpha Beta Alpha-Beta Complex DHBP synthase DHBP synthase 1k4lA00
4I14A 1G58A 4P6CA 3LQUA 1G57A 1TKUA 3LRJA 2RIUA 3L7VA 4E1BA 4P8JA 1IEZA 1K4OA 2MX1A 1TKSA 2EQAA 3LS6A 3MIOA 1K4PA 1PVYA 4P6PA 1HRUA 1K4IA 3H07A 4P77A 1JCUA 2RISA 1K49A 3AJEA 1SNNA 4FFJA 4P6DA 3MGZA 3MK5A 1K7JA 1K4LA 4P8EA 1KK9A 1PVWA
chains in the Genus database with same CATH superfamily
4I14A 1G58A 4P6CA 3LQUA 1G57A 3TSQA 3VETA 1TKUA 3LRJA 2RIUA 3L7VA 3VEWA 4E1BA 3TSPA 3TSUA 3VEOA 4P8JA 1IEZA 1K4OA 3TTCA 3TTFA 3TTDA 3VENA 2MX1A 1TKSA 3VESA 2EQAA 3LS6A 3MIOA 3VEXA 1K4PA 1PVYA 4P6PA 1HRUA 1K4IA 3H07A 4P77A 1JCUA 2RISA 1K49A 3AJEA 3VERA 3VF2A 3VF4A 3VTHA 1SNNA 4FFJA 4P6DA 3MGZA 3VEZA 3MK5A 1K7JA 1K4LA 4P8EA 3VTIA 1KK9A 1PVWA
chains in the Genus database with same CATH topology
4I14A 1G58A 4P6CA 3LQUA 1G57A 3TSQA 3VETA 1TKUA 3LRJA 2RIUA 3L7VA 3VEWA 4E1BA 3TSPA 3TSUA 3VEOA 4P8JA 1IEZA 1K4OA 3TTCA 3TTFA 3TTDA 3VENA 2MX1A 1TKSA 3VESA 2EQAA 3LS6A 3MIOA 3VEXA 1K4PA 1PVYA 4P6PA 1HRUA 1K4IA 3H07A 4P77A 1JCUA 2RISA 1K49A 3AJEA 3VERA 3VF2A 3VF4A 3VTHA 1SNNA 4FFJA 4P6DA 3MGZA 3VEZA 3MK5A 1K7JA 1K4LA 4P8EA 3VTIA 1KK9A 1PVWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4I14 A;  1G58 A;  4P6C A;  3LQU A;  1G57 A;  1TKU A;  3LRJ A;  2RIU A;  3L7V A;  4E1B A;  4P8J A;  1IEZ A;  1K4O A;  2MX1 A;  1TKS A;  2EQA A;  3LS6 A;  3MIO A;  1K4P A;  1PVY A;  4P6P A;  1HRU A;  1K4I A;  3H07 A;  4P77 A;  1JCU A;  2RIS A;  1K49 A;  3AJE A;  1SNN A;  4FFJ A;  4P6D A;  3MGZ A;  3MK5 A;  1K7J A;  1K4L A;  4P8E A;  1KK9 A;  1PVW A; 
#chains in the Genus database with same CATH topology
 4I14 A;  1G58 A;  4P6C A;  3LQU A;  1G57 A;  3TSQ A;  3VET A;  1TKU A;  3LRJ A;  2RIU A;  3L7V A;  3VEW A;  4E1B A;  3TSP A;  3TSU A;  3VEO A;  4P8J A;  1IEZ A;  1K4O A;  3TTC A;  3TTF A;  3TTD A;  3VEN A;  2MX1 A;  1TKS A;  3VES A;  2EQA A;  3LS6 A;  3MIO A;  3VEX A;  1K4P A;  1PVY A;  4P6P A;  1HRU A;  1K4I A;  3H07 A;  4P77 A;  1JCU A;  2RIS A;  1K49 A;  3AJE A;  3VER A;  3VF2 A;  3VF4 A;  3VTH A;  1SNN A;  4FFJ A;  4P6D A;  3MGZ A;  3VEZ A;  3MK5 A;  1K7J A;  1K4L A;  4P8E A;  3VTI A;  1KK9 A;  1PVW A; 
#chains in the Genus database with same CATH homology
 4I14 A;  1G58 A;  4P6C A;  3LQU A;  1G57 A;  3TSQ A;  3VET A;  1TKU A;  3LRJ A;  2RIU A;  3L7V A;  3VEW A;  4E1B A;  3TSP A;  3TSU A;  3VEO A;  4P8J A;  1IEZ A;  1K4O A;  3TTC A;  3TTF A;  3TTD A;  3VEN A;  2MX1 A;  1TKS A;  3VES A;  2EQA A;  3LS6 A;  3MIO A;  3VEX A;  1K4P A;  1PVY A;  4P6P A;  1HRU A;  1K4I A;  3H07 A;  4P77 A;  1JCU A;  2RIS A;  1K49 A;  3AJE A;  3VER A;  3VF2 A;  3VF4 A;  3VTH A;  1SNN A;  4FFJ A;  4P6D A;  3MGZ A;  3VEZ A;  3MK5 A;  1K7J A;  1K4L A;  4P8E A;  3VTI A;  1KK9 A;  1PVW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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